RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 SURF6O75683 361 aaKnown RBP26.01■■□□□ 1.75
SCARB1-210ENST00000545493 OS9Q13438 667 aaPredicted RBP26.01■■□□□ 1.75
SCARB1-210ENST00000545493 TAF1CQ15572 869 aaPredicted RBP26.01■■□□□ 1.75
SCARB1-210ENST00000545493 CEP85Q6P2H3 762 aa26.01■■□□□ 1.75
SCARB1-210ENST00000545493 NOP58Q9Y2X3 529 aaKnown RBP26.01■■□□□ 1.75
SCARB1-210ENST00000545493 TRIM17Q9Y577 477 aa26.01■■□□□ 1.75
SCARB1-210ENST00000545493 MYO5AQ9Y4I1 1855 aaKnown RBP26■■□□□ 1.75
SCARB1-210ENST00000545493 GPR75-ASB3A0A0A6YYF3 556 aa26■■□□□ 1.75
SCARB1-210ENST00000545493 UQCRFS1P1P0C7P4 283 aa26■■□□□ 1.75
SCARB1-210ENST00000545493 PPATQ06203 517 aa26■■□□□ 1.75
SCARB1-210ENST00000545493 SNAPC2Q13487 334 aa26■■□□□ 1.75
SCARB1-210ENST00000545493 DDTLA6NHG4 134 aaPredicted RBP25.99■■□□□ 1.75
SCARB1-210ENST00000545493 BTBD19C9JJ37 291 aa25.99■■□□□ 1.75
SCARB1-210ENST00000545493 SLURP2P0DP57 97 aa25.99■■□□□ 1.75
SCARB1-210ENST00000545493 CETPP11597 493 aa25.99■■□□□ 1.75
SCARB1-210ENST00000545493 PICALMQ13492 652 aa25.99■■□□□ 1.75
SCARB1-210ENST00000545493 ERO1AQ96HE7 468 aa25.99■■□□□ 1.75
SCARB1-210ENST00000545493 PHIPQ8WWQ0 1821 aa25.98■■□□□ 1.75
SCARB1-210ENST00000545493 SP3Q02447 781 aa25.98■■□□□ 1.75
SCARB1-210ENST00000545493 TLR7Q9NYK1 1049 aaKnown RBP25.98■■□□□ 1.75
SCARB1-210ENST00000545493 KCNH4Q9UQ05 1017 aa25.98■■□□□ 1.75
SCARB1-210ENST00000545493 CDK5RAP2Q96SN8 1893 aa25.98■■□□□ 1.75
SCARB1-210ENST00000545493 COL2A1P02458 1487 aaPredicted RBP25.98■■□□□ 1.75
SCARB1-210ENST00000545493 SIPA1L1O43166 1804 aa25.98■■□□□ 1.75
SCARB1-210ENST00000545493 PTPRFP10586 1907 aa25.97■■□□□ 1.75
SCARB1-210ENST00000545493 PHF20L1A8MW92 1017 aa25.97■■□□□ 1.75
SCARB1-210ENST00000545493 TTC39AQ5SRH9 613 aa25.97■■□□□ 1.75
SCARB1-210ENST00000545493 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.97■■□□□ 1.75
SCARB1-210ENST00000545493 ZFYVE28Q9HCC9 887 aa25.97■■□□□ 1.75
SCARB1-210ENST00000545493 RAI14Q9P0K7 980 aa25.97■■□□□ 1.75
SCARB1-210ENST00000545493 DBNLQ9UJU6 430 aaKnown RBP25.97■■□□□ 1.75
SCARB1-210ENST00000545493 FOCADQ5VW36 1801 aa25.97■■□□□ 1.75
SCARB1-210ENST00000545493 ZCCHC17Q9NP64 241 aaKnown RBP25.96■■□□□ 1.75
SCARB1-210ENST00000545493 SNRKQ9NRH2 765 aa25.96■■□□□ 1.75
SCARB1-210ENST00000545493 MKI67P46013 3256 aaKnown RBP25.95■■□□□ 1.74
SCARB1-210ENST00000545493 GSTO1P78417 241 aa25.95■■□□□ 1.74
SCARB1-210ENST00000545493 MAP3K10Q02779 954 aa25.95■■□□□ 1.74
SCARB1-210ENST00000545493 MOGSQ13724 837 aa25.95■■□□□ 1.74
SCARB1-210ENST00000545493 ZSCAN29Q8IWY8 852 aaPredicted RBP25.95■■□□□ 1.74
SCARB1-210ENST00000545493 CCDC158Q5M9N0 1113 aa25.94■■□□□ 1.74
SCARB1-210ENST00000545493 SCYL3Q8IZE3 742 aa25.94■■□□□ 1.74
SCARB1-210ENST00000545493 EFCC1Q9HA90 598 aa25.94■■□□□ 1.74
SCARB1-210ENST00000545493 RBBP6Q7Z6E9 1792 aaKnown RBP25.94■■□□□ 1.74
SCARB1-210ENST00000545493 ATAD5Q96QE3 1844 aa25.93■■□□□ 1.74
SCARB1-210ENST00000545493 NPM3O75607 178 aaKnown RBP25.93■■□□□ 1.74
SCARB1-210ENST00000545493 CYP2E1P05181 493 aaPredicted RBP25.93■■□□□ 1.74
SCARB1-210ENST00000545493 EAF2Q96CJ1 260 aaPredicted RBP25.93■■□□□ 1.74
SCARB1-210ENST00000545493 ZNF512BQ96KM6 892 aaPredicted RBP25.93■■□□□ 1.74
SCARB1-210ENST00000545493 LRP2BPQ9P2M1 347 aa25.93■■□□□ 1.74
SCARB1-210ENST00000545493 PTPN22Q9Y2R2 807 aa25.93■■□□□ 1.74
SCARB1-210ENST00000545493 TLR2O60603 784 aa25.92■■□□□ 1.74
SCARB1-210ENST00000545493 LDHCP07864 332 aa25.92■■□□□ 1.74
SCARB1-210ENST00000545493 CCDC8Q9H0W5 538 aaPredicted RBP25.92■■□□□ 1.74
SCARB1-210ENST00000545493 EXOC6BQ9Y2D4 811 aa25.92■■□□□ 1.74
SCARB1-210ENST00000545493 ADGRA2Q96PE1 1338 aa25.91■■□□□ 1.74
SCARB1-210ENST00000545493 ANKRD23Q86SG2 305 aa25.91■■□□□ 1.74
SCARB1-210ENST00000545493 ADGRA1Q86SQ6 560 aa25.91■■□□□ 1.74
SCARB1-210ENST00000545493 OSBPL5Q9H0X9 879 aaPredicted RBP25.91■■□□□ 1.74
SCARB1-210ENST00000545493 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.91■■□□□ 1.74
SCARB1-210ENST00000545493 MAP4K4O95819 1239 aaPredicted RBP25.9■■□□□ 1.74
SCARB1-210ENST00000545493 ZAP70P43403 619 aa25.9■■□□□ 1.74
SCARB1-210ENST00000545493 TEX11Q8IYF3 940 aa25.9■■□□□ 1.74
SCARB1-210ENST00000545493 SH3RF3Q8TEJ3 882 aaPredicted RBP25.9■■□□□ 1.74
SCARB1-210ENST00000545493 PIH1D3Q9NQM4 214 aaKnown RBP25.9■■□□□ 1.74
SCARB1-210ENST00000545493 FAM196BA6NMK8 535 aa25.89■■□□□ 1.74
SCARB1-210ENST00000545493 PTPRAP18433 802 aa25.89■■□□□ 1.74
SCARB1-210ENST00000545493 NAA16Q6N069 864 aaPredicted RBP25.89■■□□□ 1.74
SCARB1-210ENST00000545493 AATFQ9NY61 560 aaKnown RBP eCLIP25.89■■□□□ 1.74
SCARB1-210ENST00000545493 LOC285556D6RIA3 1793 aa25.88■■□□□ 1.73
SCARB1-210ENST00000545493 ARHGAP39Q9C0H5 1083 aa25.88■■□□□ 1.73
SCARB1-210ENST00000545493 PICK1Q9NRD5 415 aa25.88■■□□□ 1.73
SCARB1-210ENST00000545493 A0A0G2JLL6 359 aaPredicted RBP25.87■■□□□ 1.73
SCARB1-210ENST00000545493 PDHXO00330 501 aa25.87■■□□□ 1.73
SCARB1-210ENST00000545493 TBC1D12O60347 775 aa25.87■■□□□ 1.73
SCARB1-210ENST00000545493 MS4A1P11836 297 aa25.87■■□□□ 1.73
SCARB1-210ENST00000545493 GPAT2Q6NUI2 795 aa25.87■■□□□ 1.73
SCARB1-210ENST00000545493 PRRT2Q7Z6L0 340 aaPredicted RBP25.87■■□□□ 1.73
SCARB1-210ENST00000545493 COG6Q9Y2V7 657 aa25.87■■□□□ 1.73
SCARB1-210ENST00000545493 CXCL11O14625 94 aa25.86■■□□□ 1.73
SCARB1-210ENST00000545493 CTNND1O60716 968 aaKnown RBP25.86■■□□□ 1.73
SCARB1-210ENST00000545493 LACTBP83111 547 aaPredicted RBP25.86■■□□□ 1.73
SCARB1-210ENST00000545493 C17orf99Q6UX52 265 aa25.86■■□□□ 1.73
SCARB1-210ENST00000545493 CCDC84Q86UT8 332 aaPredicted RBP25.86■■□□□ 1.73
SCARB1-210ENST00000545493 ERC1Q8IUD2 1116 aa25.86■■□□□ 1.73
SCARB1-210ENST00000545493 ARMC5Q96C12 935 aa25.86■■□□□ 1.73
SCARB1-210ENST00000545493 AFG3L2Q9Y4W6 797 aa25.86■■□□□ 1.73
SCARB1-210ENST00000545493 NDUFB9Q9Y6M9 179 aa25.86■■□□□ 1.73
SCARB1-210ENST00000545493 ZHX2Q9Y6X8 837 aa25.86■■□□□ 1.73
SCARB1-210ENST00000545493 CPA4Q9UI42 421 aa25.85■■□□□ 1.73
SCARB1-210ENST00000545493 RCAN3Q9UKA8 241 aa25.85■■□□□ 1.73
SCARB1-210ENST00000545493 DDX19BQ9UMR2 479 aa25.85■■□□□ 1.73
SCARB1-210ENST00000545493 PTCH2Q9Y6C5 1203 aa25.85■■□□□ 1.73
SCARB1-210ENST00000545493 FLT1P17948 1338 aa25.85■■□□□ 1.73
SCARB1-210ENST00000545493 PPP4CP60510 307 aa25.84■■□□□ 1.73
SCARB1-210ENST00000545493 DDX60LQ5H9U9 1706 aaKnown RBP25.84■■□□□ 1.73
SCARB1-210ENST00000545493 AACSQ86V21 672 aa25.84■■□□□ 1.73
SCARB1-210ENST00000545493 NOL10Q9BSC4 688 aaKnown RBP25.84■■□□□ 1.73
SCARB1-210ENST00000545493 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.84■■□□□ 1.734e-7■■□□□ 12
SCARB1-210ENST00000545493 ZBTB40Q9NUA8 1239 aa25.84■■□□□ 1.73
SCARB1-210ENST00000545493 CTGFP29279 349 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms