RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 SOX11P35716 441 aa9.66□□□□□ -0.86
SNHG1-223ENST00000545440 GGCXP38435 758 aa9.66□□□□□ -0.86
SNHG1-223ENST00000545440 CHRNDQ07001 517 aa9.66□□□□□ -0.86
SNHG1-223ENST00000545440 CCDC57Q2TAC2 916 aa9.66□□□□□ -0.86
SNHG1-223ENST00000545440 EPHA10Q5JZY3 1008 aa9.66□□□□□ -0.86
SNHG1-223ENST00000545440 LMBR1LQ6UX01 489 aa9.66□□□□□ -0.86
SNHG1-223ENST00000545440 RNF166Q96A37 237 aaPredicted RBP9.66□□□□□ -0.86
SNHG1-223ENST00000545440 KCNQ5Q9NR82 932 aa9.66□□□□□ -0.86
SNHG1-223ENST00000545440 CHMP3Q9Y3E7 222 aa9.66□□□□□ -0.86
SNHG1-223ENST00000545440 MYO3BQ8WXR4 1341 aa9.65□□□□□ -0.86
SNHG1-223ENST00000545440 KIF16BQ96L93 1317 aa9.65□□□□□ -0.86
SNHG1-223ENST00000545440 USP17L3A6NCW0 530 aa9.65□□□□□ -0.86
SNHG1-223ENST00000545440 USP17L4A6NCW7 530 aa9.65□□□□□ -0.86
SNHG1-223ENST00000545440 RASSF10A6NK89 507 aa9.65□□□□□ -0.86
SNHG1-223ENST00000545440 DXOO77932 396 aaKnown RBP9.65□□□□□ -0.86
SNHG1-223ENST00000545440 KCNJ4P48050 445 aa9.65□□□□□ -0.86
SNHG1-223ENST00000545440 MMP16P51512 607 aa9.65□□□□□ -0.86
SNHG1-223ENST00000545440 HIRAP54198 1017 aaPredicted RBP9.65□□□□□ -0.86
SNHG1-223ENST00000545440 RABL6Q3YEC7 729 aaPredicted RBP9.65□□□□□ -0.86
SNHG1-223ENST00000545440 USP17L1Q7RTZ2 530 aa9.65□□□□□ -0.86
SNHG1-223ENST00000545440 KAZALD1Q96I82 304 aa9.65□□□□□ -0.86
SNHG1-223ENST00000545440 SUCLG2Q96I99 432 aa9.65□□□□□ -0.86
SNHG1-223ENST00000545440 TRIM34Q9BYJ4 488 aa9.65□□□□□ -0.86
SNHG1-223ENST00000545440 COA1Q9GZY4 146 aa9.65□□□□□ -0.86
SNHG1-223ENST00000545440 FKBPLQ9UIM3 349 aa9.65□□□□□ -0.86
SNHG1-223ENST00000545440 IRS2Q9Y4H2 1338 aa9.64□□□□□ -0.87
SNHG1-223ENST00000545440 WTIPA6NIX2 430 aaPredicted RBP9.64□□□□□ -0.87
SNHG1-223ENST00000545440 KLRK1P26718 216 aa9.64□□□□□ -0.87
SNHG1-223ENST00000545440 ZNF280AP59817 542 aaPredicted RBP9.64□□□□□ -0.87
SNHG1-223ENST00000545440 KIF4BQ2VIQ3 1234 aa9.64□□□□□ -0.87
SNHG1-223ENST00000545440 TAF7LQ5H9L4 462 aa9.64□□□□□ -0.87
SNHG1-223ENST00000545440 STRIP1Q5VSL9 837 aa9.64□□□□□ -0.87
SNHG1-223ENST00000545440 C15orf52Q6ZUT6 534 aaKnown RBP9.64□□□□□ -0.87
SNHG1-223ENST00000545440 GPKOWQ92917 476 aaPredicted RBP eCLIP9.64□□□□□ -0.872e-31■■■□□ 17.2
SNHG1-223ENST00000545440 GMLQ99445 158 aa9.64□□□□□ -0.87
SNHG1-223ENST00000545440 MKRN1Q9UHC7 482 aaKnown RBP9.64□□□□□ -0.87
SNHG1-223ENST00000545440 TRAF5O00463 557 aa9.63□□□□□ -0.87
SNHG1-223ENST00000545440 EGFRP00533 1210 aa9.63□□□□□ -0.87
SNHG1-223ENST00000545440 MMP14P50281 582 aa9.63□□□□□ -0.87
SNHG1-223ENST00000545440 KCNC4Q03721 635 aa9.63□□□□□ -0.87
SNHG1-223ENST00000545440 KCNH2Q12809 1159 aa9.63□□□□□ -0.87
SNHG1-223ENST00000545440 SEMA3FQ13275 785 aa9.63□□□□□ -0.87
SNHG1-223ENST00000545440 TBC1D10BQ4KMP7 808 aaPredicted RBP9.63□□□□□ -0.87
SNHG1-223ENST00000545440 TJAP1Q5JTD0 557 aa9.63□□□□□ -0.87
SNHG1-223ENST00000545440 DACT2Q5SW24 774 aa9.63□□□□□ -0.87
SNHG1-223ENST00000545440 LDHAL6AQ6ZMR3 332 aa9.63□□□□□ -0.87
SNHG1-223ENST00000545440 CDC37L1Q7L3B6 337 aa9.63□□□□□ -0.87
SNHG1-223ENST00000545440 TXNRD3Q86VQ6 643 aa9.63□□□□□ -0.87
SNHG1-223ENST00000545440 FAM160A2Q8N612 972 aaPredicted RBP9.63□□□□□ -0.87
SNHG1-223ENST00000545440 ANKRD44Q8N8A2 993 aa9.63□□□□□ -0.87
SNHG1-223ENST00000545440 ZNF594Q96JF6 807 aaPredicted RBP9.63□□□□□ -0.87
SNHG1-223ENST00000545440 GLIS2Q9BZE0 524 aaPredicted RBP9.63□□□□□ -0.87
SNHG1-223ENST00000545440 API5Q9BZZ5 524 aaKnown RBP9.63□□□□□ -0.87
SNHG1-223ENST00000545440 USP44Q9H0E7 712 aa9.63□□□□□ -0.87
SNHG1-223ENST00000545440 BICC1Q9H694 974 aaKnown RBP9.63□□□□□ -0.87
SNHG1-223ENST00000545440 CNNM1Q9NRU3 951 aa9.63□□□□□ -0.87
SNHG1-223ENST00000545440 EVA1BQ9NVM1 165 aa9.63□□□□□ -0.87
SNHG1-223ENST00000545440 ABT1Q9ULW3 272 aaKnown RBP9.63□□□□□ -0.87
SNHG1-223ENST00000545440 OTOFQ9HC10 1997 aa9.63□□□□□ -0.87
SNHG1-223ENST00000545440 MROH5Q6ZUA9 1318 aa9.62□□□□□ -0.87
SNHG1-223ENST00000545440 PITPNM2Q9BZ72 1349 aa9.62□□□□□ -0.87
SNHG1-223ENST00000545440 TLL1O43897 1013 aa9.62□□□□□ -0.87
SNHG1-223ENST00000545440 TAF5LO75529 589 aa9.62□□□□□ -0.87
SNHG1-223ENST00000545440 RARSP54136 660 aaKnown RBP9.62□□□□□ -0.87
SNHG1-223ENST00000545440 CST9Q5W186 159 aa9.62□□□□□ -0.87
SNHG1-223ENST00000545440 ZNF804AQ7Z570 1209 aa9.62□□□□□ -0.87
SNHG1-223ENST00000545440 CCDC82Q8N4S0 544 aa9.62□□□□□ -0.87
SNHG1-223ENST00000545440 ARHGAP45Q92619 1136 aa9.62□□□□□ -0.87
SNHG1-223ENST00000545440 MYOZ2Q9NPC6 264 aa9.62□□□□□ -0.87
SNHG1-223ENST00000545440 GGA3Q9NZ52 723 aa9.62□□□□□ -0.87
SNHG1-223ENST00000545440 TLL2Q9Y6L7 1015 aa9.62□□□□□ -0.87
SNHG1-223ENST00000545440 COL1A1P02452 1464 aaPredicted RBP9.61□□□□□ -0.87
SNHG1-223ENST00000545440 CELF2O95319 508 aaKnown RBP9.61□□□□□ -0.87
SNHG1-223ENST00000545440 HSPA1AP0DMV8 641 aaKnown RBP9.61□□□□□ -0.87
SNHG1-223ENST00000545440 HSPA1BP0DMV9 641 aaKnown RBP9.61□□□□□ -0.87
SNHG1-223ENST00000545440 VEGFBP49765 207 aa9.61□□□□□ -0.87
SNHG1-223ENST00000545440 PTK2Q05397 1052 aa9.61□□□□□ -0.87
SNHG1-223ENST00000545440 FMR1Q06787 632 aaKnown RBP eCLIP9.61□□□□□ -0.87
SNHG1-223ENST00000545440 DEFB115Q30KQ5 88 aa9.61□□□□□ -0.87
SNHG1-223ENST00000545440 KRT26Q7Z3Y9 468 aa9.61□□□□□ -0.87
SNHG1-223ENST00000545440 DCPSQ96C86 337 aaKnown RBP9.61□□□□□ -0.87
SNHG1-223ENST00000545440 HHIPL1Q96JK4 782 aa9.61□□□□□ -0.87
SNHG1-223ENST00000545440 CD209Q9NNX6 404 aa9.61□□□□□ -0.87
SNHG1-223ENST00000545440 NOB1Q9ULX3 412 aaKnown RBP9.61□□□□□ -0.87
SNHG1-223ENST00000545440 MYH2Q9UKX2 1941 aa9.6□□□□□ -0.87
SNHG1-223ENST00000545440 ZBED9Q6R2W3 1325 aa9.6□□□□□ -0.87
SNHG1-223ENST00000545440 ZBTB24O43167 697 aaPredicted RBP9.6□□□□□ -0.87
SNHG1-223ENST00000545440 F12P00748 615 aaPredicted RBP9.6□□□□□ -0.87
SNHG1-223ENST00000545440 UBTFL1P0CB47 393 aaPredicted RBP9.6□□□□□ -0.87
SNHG1-223ENST00000545440 IL1R1P14778 569 aa9.6□□□□□ -0.87
SNHG1-223ENST00000545440 ECE1P42892 770 aa9.6□□□□□ -0.87
SNHG1-223ENST00000545440 HNRNPUQ00839 825 aaKnown RBP eCLIP9.6□□□□□ -0.87
SNHG1-223ENST00000545440 VAC14Q08AM6 782 aa9.6□□□□□ -0.87
SNHG1-223ENST00000545440 UBE4AQ14139 1066 aa9.6□□□□□ -0.87
SNHG1-223ENST00000545440 TTLL5Q6EMB2 1281 aa9.6□□□□□ -0.87
SNHG1-223ENST00000545440 SAPCD2Q86UD0 394 aa9.6□□□□□ -0.87
SNHG1-223ENST00000545440 OGFOD1Q8N543 542 aa9.6□□□□□ -0.87
SNHG1-223ENST00000545440 EPS8L1Q8TE68 723 aa9.6□□□□□ -0.87
SNHG1-223ENST00000545440 GLMNQ92990 594 aa9.6□□□□□ -0.87
SNHG1-223ENST00000545440 PLSCR2Q9NRY7 297 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms