RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 FAM198AQ9UFP1 575 aa14.1□□□□□ -0.15
SNHG1-221ENST00000544983 ATRNL1Q5VV63 1379 aa14.09□□□□□ -0.15
SNHG1-221ENST00000544983 PATL2C9JE40 543 aaKnown RBP14.09□□□□□ -0.15
SNHG1-221ENST00000544983 CHMLP26374 656 aa14.09□□□□□ -0.15
SNHG1-221ENST00000544983 CACNB3P54284 484 aa14.09□□□□□ -0.15
SNHG1-221ENST00000544983 FKBP1BP68106 108 aa14.09□□□□□ -0.15
SNHG1-221ENST00000544983 NFIAQ12857 509 aa14.09□□□□□ -0.15
SNHG1-221ENST00000544983 NMIQ13287 307 aaPredicted RBP14.09□□□□□ -0.15
SNHG1-221ENST00000544983 AMOTL1Q8IY63 956 aa14.09□□□□□ -0.15
SNHG1-221ENST00000544983 LCORLQ8N3X6 602 aa14.09□□□□□ -0.15
SNHG1-221ENST00000544983 GLIS2Q9BZE0 524 aaPredicted RBP14.09□□□□□ -0.15
SNHG1-221ENST00000544983 NACAP1Q9BZK3 213 aa14.09□□□□□ -0.15
SNHG1-221ENST00000544983 OSBPL5Q9H0X9 879 aaPredicted RBP14.09□□□□□ -0.15
SNHG1-221ENST00000544983 ARMT1Q9H993 441 aa14.09□□□□□ -0.15
SNHG1-221ENST00000544983 FLT1P17948 1338 aa14.09□□□□□ -0.15
SNHG1-221ENST00000544983 CNTNAP1P78357 1384 aa14.09□□□□□ -0.15
SNHG1-221ENST00000544983 M0R2C6 588 aa14.08□□□□□ -0.16
SNHG1-221ENST00000544983 EIF5BO60841 1220 aaKnown RBP14.08□□□□□ -0.16
SNHG1-221ENST00000544983 PICALMQ13492 652 aa14.08□□□□□ -0.16
SNHG1-221ENST00000544983 DCAF15Q66K64 600 aa14.08□□□□□ -0.16
SNHG1-221ENST00000544983 CWC27Q6UX04 472 aaKnown RBP14.08□□□□□ -0.16
SNHG1-221ENST00000544983 TTC6Q86TZ1 520 aa14.08□□□□□ -0.16
SNHG1-221ENST00000544983 FAM227BQ96M60 508 aa14.08□□□□□ -0.16
SNHG1-221ENST00000544983 TEPSINQ96N21 525 aa14.08□□□□□ -0.16
SNHG1-221ENST00000544983 DDX4Q9NQI0 724 aaKnown RBP14.08□□□□□ -0.16
SNHG1-221ENST00000544983 MKRN1Q9UHC7 482 aaKnown RBP14.08□□□□□ -0.16
SNHG1-221ENST00000544983 SLC4A4Q9Y6R1 1079 aa14.08□□□□□ -0.16
SNHG1-221ENST00000544983 CCDC171Q6TFL3 1326 aa14.08□□□□□ -0.16
SNHG1-221ENST00000544983 PASKQ96RG2 1323 aa14.08□□□□□ -0.16
SNHG1-221ENST00000544983 FOCADQ5VW36 1801 aa14.07□□□□□ -0.16
SNHG1-221ENST00000544983 A0A0D9SFI3 127 aa14.07□□□□□ -0.16
SNHG1-221ENST00000544983 UNCXA6NJT0 531 aa14.07□□□□□ -0.16
SNHG1-221ENST00000544983 ADM5C9JUS6 153 aa14.07□□□□□ -0.16
SNHG1-221ENST00000544983 PPP1R12BO60237 982 aaPredicted RBP14.07□□□□□ -0.16
SNHG1-221ENST00000544983 CDC45O75419 566 aa14.07□□□□□ -0.16
SNHG1-221ENST00000544983 CHGBP05060 677 aa14.07□□□□□ -0.16
SNHG1-221ENST00000544983 HLA-DOAP06340 250 aa14.07□□□□□ -0.16
SNHG1-221ENST00000544983 TCP10Q12799 353 aa14.07□□□□□ -0.16
SNHG1-221ENST00000544983 SLFNL1Q499Z3 407 aa14.07□□□□□ -0.16
SNHG1-221ENST00000544983 SKAP1Q86WV1 359 aa14.07□□□□□ -0.16
SNHG1-221ENST00000544983 ZSCAN29Q8IWY8 852 aaPredicted RBP14.07□□□□□ -0.16
SNHG1-221ENST00000544983 CDCA5Q96FF9 252 aa14.07□□□□□ -0.16
SNHG1-221ENST00000544983 TMEM39BQ9GZU3 492 aa14.07□□□□□ -0.16
SNHG1-221ENST00000544983 DCP1AQ9NPI6 582 aaPredicted RBP14.07□□□□□ -0.16
SNHG1-221ENST00000544983 PI4KBQ9UBF8 816 aa14.07□□□□□ -0.16
SNHG1-221ENST00000544983 TBC1D12O60347 775 aa14.06□□□□□ -0.16
SNHG1-221ENST00000544983 ALX1Q15699 326 aa14.06□□□□□ -0.16
SNHG1-221ENST00000544983 FOXP4Q8IVH2 680 aaPredicted RBP14.06□□□□□ -0.16
SNHG1-221ENST00000544983 MAPKAPK5Q8IW41 473 aa14.06□□□□□ -0.16
SNHG1-221ENST00000544983 JMYQ8N9B5 988 aa14.06□□□□□ -0.16
SNHG1-221ENST00000544983 CSRNP1Q96S65 589 aa14.06□□□□□ -0.16
SNHG1-221ENST00000544983 SEC62Q99442 399 aaKnown RBP14.06□□□□□ -0.16
SNHG1-221ENST00000544983 HERC5Q9UII4 1024 aaKnown RBP14.06□□□□□ -0.16
SNHG1-221ENST00000544983 ZMYM6O95789 1325 aa14.06□□□□□ -0.16
SNHG1-221ENST00000544983 GSG1L2A8MUP6 293 aa14.05□□□□□ -0.16
SNHG1-221ENST00000544983 TRAF5O00463 557 aa14.05□□□□□ -0.16
SNHG1-221ENST00000544983 SGSM2O43147 1006 aa14.05□□□□□ -0.16
SNHG1-221ENST00000544983 APPP05067 770 aa14.05□□□□□ -0.16
SNHG1-221ENST00000544983 MAP3K10Q02779 954 aa14.05□□□□□ -0.16
SNHG1-221ENST00000544983 SBK1Q52WX2 424 aa14.05□□□□□ -0.16
SNHG1-221ENST00000544983 C2orf69Q8N8R5 385 aa14.05□□□□□ -0.16
SNHG1-221ENST00000544983 SDR42E1Q8WUS8 393 aa14.05□□□□□ -0.16
SNHG1-221ENST00000544983 DSCC1Q9BVC3 393 aa14.05□□□□□ -0.16
SNHG1-221ENST00000544983 EHD4Q9H223 541 aa14.05□□□□□ -0.16
SNHG1-221ENST00000544983 MCM9Q9NXL9 1143 aa14.05□□□□□ -0.16
SNHG1-221ENST00000544983 ARPP21Q9UBL0 812 aaPredicted RBP14.05□□□□□ -0.16
SNHG1-221ENST00000544983 CDK5RAP2Q96SN8 1893 aa14.05□□□□□ -0.16
SNHG1-221ENST00000544983 TRPM7Q96QT4 1865 aa14.04□□□□□ -0.16
SNHG1-221ENST00000544983 CELF2O95319 508 aaKnown RBP14.04□□□□□ -0.16
SNHG1-221ENST00000544983 POLR3DP05423 398 aaPredicted RBP14.04□□□□□ -0.16
SNHG1-221ENST00000544983 HSPD1P10809 573 aaKnown RBP14.04□□□□□ -0.16
SNHG1-221ENST00000544983 MAP3K11Q16584 847 aa14.04□□□□□ -0.16
SNHG1-221ENST00000544983 NBPF12Q5TAG4 269 aaPredicted RBP14.04□□□□□ -0.16
SNHG1-221ENST00000544983 KIAA1211Q6ZU35 1233 aa14.04□□□□□ -0.16
SNHG1-221ENST00000544983 ARMC9Q7Z3E5 817 aa14.04□□□□□ -0.16
SNHG1-221ENST00000544983 METTL16Q86W50 562 aaKnown RBP14.04□□□□□ -0.16
SNHG1-221ENST00000544983 ZFPM1Q8IX07 1006 aa14.04□□□□□ -0.16
SNHG1-221ENST00000544983 IFNL3Q8IZI9 196 aa14.04□□□□□ -0.16
SNHG1-221ENST00000544983 NAPBQ9H115 298 aa14.04□□□□□ -0.16
SNHG1-221ENST00000544983 GBA2Q9HCG7 927 aaPredicted RBP14.04□□□□□ -0.16
SNHG1-221ENST00000544983 DDTLA6NHG4 134 aaPredicted RBP14.03□□□□□ -0.16
SNHG1-221ENST00000544983 TMEM88BA6NKF7 163 aa14.03□□□□□ -0.16
SNHG1-221ENST00000544983 PRKAB2O43741 272 aa14.03□□□□□ -0.16
SNHG1-221ENST00000544983 IREB2P48200 963 aaKnown RBP14.03□□□□□ -0.16
SNHG1-221ENST00000544983 TDO2P48775 406 aa14.03□□□□□ -0.16
SNHG1-221ENST00000544983 SH3BP5LQ7L8J4 393 aa14.03□□□□□ -0.16
SNHG1-221ENST00000544983 ZNF589Q86UQ0 364 aaPredicted RBP14.03□□□□□ -0.16
SNHG1-221ENST00000544983 ESYT1Q9BSJ8 1104 aa14.03□□□□□ -0.16
SNHG1-221ENST00000544983 TRIM34Q9BYJ4 488 aa14.03□□□□□ -0.16
SNHG1-221ENST00000544983 ZNF287Q9HBT7 754 aa14.03□□□□□ -0.16
SNHG1-221ENST00000544983 CTNNA3Q9UI47 895 aa14.03□□□□□ -0.16
SNHG1-221ENST00000544983 PALD1Q9ULE6 856 aa14.03□□□□□ -0.16
SNHG1-221ENST00000544983 SCAF8Q9UPN6 1271 aaKnown RBP14.03□□□□□ -0.16
SNHG1-221ENST00000544983 MYH1P12882 1939 aa14.02□□□□□ -0.16
SNHG1-221ENST00000544983 USP17L12C9JPN9 530 aa14.02□□□□□ -0.17
SNHG1-221ENST00000544983 USP17L21D6R901 530 aa14.02□□□□□ -0.17
SNHG1-221ENST00000544983 SLC3A2P08195 630 aaKnown RBP14.02□□□□□ -0.17
SNHG1-221ENST00000544983 NT5C2P49902 561 aa14.02□□□□□ -0.17
SNHG1-221ENST00000544983 C12orf60Q5U649 245 aa14.02□□□□□ -0.17
SNHG1-221ENST00000544983 PRAMEF18Q5VWM3 479 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms