RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 GNL3LQ9NVN8 582 aaKnown RBP14.41□□□□□ -0.1
PAAF1-215ENST00000544909 COL5A3P25940 1745 aaPredicted RBP14.4□□□□□ -0.1
PAAF1-215ENST00000544909 A0A1B0GVL5 298 aa14.4□□□□□ -0.1
PAAF1-215ENST00000544909 ERICH2A1L162 156 aa14.4□□□□□ -0.1
PAAF1-215ENST00000544909 GSG1L2A8MUP6 293 aa14.4□□□□□ -0.1
PAAF1-215ENST00000544909 KIF28PB7ZC32 967 aa14.4□□□□□ -0.1
PAAF1-215ENST00000544909 SEMA3EO15041 775 aa14.4□□□□□ -0.1
PAAF1-215ENST00000544909 MBD4O95243 580 aa14.4□□□□□ -0.1
PAAF1-215ENST00000544909 SYKP43405 635 aa14.4□□□□□ -0.1
PAAF1-215ENST00000544909 CRKLP46109 303 aaKnown RBP14.4□□□□□ -0.1
PAAF1-215ENST00000544909 SSRP1Q08945 709 aaKnown RBP14.4□□□□□ -0.1
PAAF1-215ENST00000544909 UBE4AQ14139 1066 aa14.4□□□□□ -0.1
PAAF1-215ENST00000544909 DDB1Q16531 1140 aa14.4□□□□□ -0.1
PAAF1-215ENST00000544909 SUSD4Q5VX71 490 aa14.4□□□□□ -0.1
PAAF1-215ENST00000544909 RESP18Q5W5W9 173 aa14.4□□□□□ -0.1
PAAF1-215ENST00000544909 NFXL1Q6ZNB6 911 aa14.4□□□□□ -0.1
PAAF1-215ENST00000544909 MAGEB6Q8N7X4 407 aa14.4□□□□□ -0.1
PAAF1-215ENST00000544909 ZNF579Q8NAF0 562 aaKnown RBP14.4□□□□□ -0.1
PAAF1-215ENST00000544909 CACTINQ8WUQ7 758 aaKnown RBP14.4□□□□□ -0.1
PAAF1-215ENST00000544909 MAP3K14Q99558 947 aa14.4□□□□□ -0.1
PAAF1-215ENST00000544909 FAM13BQ9NYF5 915 aa14.4□□□□□ -0.1
PAAF1-215ENST00000544909 MYO5AQ9Y4I1 1855 aaKnown RBP14.39□□□□□ -0.11
PAAF1-215ENST00000544909 LOC102724428A0A0B4J2F2 783 aa14.39□□□□□ -0.11
PAAF1-215ENST00000544909 IFIT3O14879 490 aaKnown RBP14.39□□□□□ -0.11
PAAF1-215ENST00000544909 DEXIO95424 95 aa14.39□□□□□ -0.11
PAAF1-215ENST00000544909 SIK1P57059 783 aa14.39□□□□□ -0.11
PAAF1-215ENST00000544909 GNL2Q13823 731 aaKnown RBP14.39□□□□□ -0.11
PAAF1-215ENST00000544909 CT47A1Q5JQC4 288 aaPredicted RBP14.39□□□□□ -0.11
PAAF1-215ENST00000544909 NOSTRINQ8IVI9 506 aa14.39□□□□□ -0.11
PAAF1-215ENST00000544909 FAM217BQ9NTX9 383 aaPredicted RBP14.39□□□□□ -0.11
PAAF1-215ENST00000544909 ECM29Q5VYK3 1845 aa14.39□□□□□ -0.11
PAAF1-215ENST00000544909 CDC27P30260 824 aa14.38□□□□□ -0.11
PAAF1-215ENST00000544909 MICU3Q86XE3 530 aa14.38□□□□□ -0.11
PAAF1-215ENST00000544909 AOPEPQ8N6M6 819 aa14.38□□□□□ -0.11
PAAF1-215ENST00000544909 CCDC34Q96HJ3 373 aa14.38□□□□□ -0.11
PAAF1-215ENST00000544909 ZSWIM5Q9P217 1185 aa14.38□□□□□ -0.11
PAAF1-215ENST00000544909 CEP131Q9UPN4 1083 aa14.38□□□□□ -0.11
PAAF1-215ENST00000544909 BMP15O95972 392 aa14.38□□□□□ -0.11
PAAF1-215ENST00000544909 MMP1P03956 469 aa14.38□□□□□ -0.11
PAAF1-215ENST00000544909 FOSBP53539 338 aa14.38□□□□□ -0.11
PAAF1-215ENST00000544909 SF3B3Q15393 1217 aaKnown RBP14.38□□□□□ -0.11
PAAF1-215ENST00000544909 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.38□□□□□ -0.11
PAAF1-215ENST00000544909 RNF26Q9BY78 433 aaPredicted RBP14.38□□□□□ -0.11
PAAF1-215ENST00000544909 CCP110O43303 1012 aa14.37□□□□□ -0.11
PAAF1-215ENST00000544909 CBFA2T2O43439 604 aa14.37□□□□□ -0.11
PAAF1-215ENST00000544909 XBP1P17861 261 aa14.37□□□□□ -0.11
PAAF1-215ENST00000544909 ATP6V1AP38606 617 aa14.37□□□□□ -0.11
PAAF1-215ENST00000544909 TDO2P48775 406 aa14.37□□□□□ -0.11
PAAF1-215ENST00000544909 WTAPQ15007 396 aa14.37□□□□□ -0.11
PAAF1-215ENST00000544909 RTN1Q16799 776 aa14.37□□□□□ -0.11
PAAF1-215ENST00000544909 DPCR1Q3MIW9 517 aa14.37□□□□□ -0.11
PAAF1-215ENST00000544909 OTUD7BQ6GQQ9 843 aa14.37□□□□□ -0.11
PAAF1-215ENST00000544909 KANK3Q6NY19 840 aa14.37□□□□□ -0.11
PAAF1-215ENST00000544909 KRI1Q8N9T8 703 aaKnown RBP14.37□□□□□ -0.11
PAAF1-215ENST00000544909 TRIML1Q8N9V2 468 aa14.37□□□□□ -0.11
PAAF1-215ENST00000544909 ESR2Q92731 530 aa14.37□□□□□ -0.11
PAAF1-215ENST00000544909 SYTL4Q96C24 671 aaPredicted RBP14.37□□□□□ -0.11
PAAF1-215ENST00000544909 BRIP1Q9BX63 1249 aa14.37□□□□□ -0.11
PAAF1-215ENST00000544909 RANBP6O60518 1105 aaKnown RBP14.36□□□□□ -0.11
PAAF1-215ENST00000544909 FGRP09769 529 aa14.36□□□□□ -0.11
PAAF1-215ENST00000544909 CCDC144BQ3MJ40 725 aa14.36□□□□□ -0.11
PAAF1-215ENST00000544909 NYAP1Q6ZVC0 841 aa14.36□□□□□ -0.11
PAAF1-215ENST00000544909 CCDC144CPQ8IYA2 1237 aa14.36□□□□□ -0.11
PAAF1-215ENST00000544909 MPNDQ8N594 471 aa14.36□□□□□ -0.11
PAAF1-215ENST00000544909 CCDC112Q8NEF3 446 aa14.36□□□□□ -0.11
PAAF1-215ENST00000544909 BSDC1Q9NW68 430 aaPredicted RBP14.36□□□□□ -0.11
PAAF1-215ENST00000544909 NRBP1Q9UHY1 535 aa14.36□□□□□ -0.11
PAAF1-215ENST00000544909 A0A1B0GUL6 1792 aa14.36□□□□□ -0.11
PAAF1-215ENST00000544909 MROH7-TTC4A0A0A0MT08 1334 aa14.36□□□□□ -0.11
PAAF1-215ENST00000544909 KDM4FA0A1W2PPD8 638 aa14.36□□□□□ -0.11
PAAF1-215ENST00000544909 PSDA5PKW4 1024 aaPredicted RBP14.36□□□□□ -0.11
PAAF1-215ENST00000544909 WDHD1O75717 1129 aaPredicted RBP14.36□□□□□ -0.11
PAAF1-215ENST00000544909 CALM1P0DP23 149 aa14.36□□□□□ -0.11
PAAF1-215ENST00000544909 CALM2P0DP24 149 aa14.36□□□□□ -0.11
PAAF1-215ENST00000544909 CALM3P0DP25 149 aa14.36□□□□□ -0.11
PAAF1-215ENST00000544909 SKILP12757 684 aa14.36□□□□□ -0.11
PAAF1-215ENST00000544909 MYL5Q02045 173 aa14.36□□□□□ -0.11
PAAF1-215ENST00000544909 CHRNDQ07001 517 aa14.36□□□□□ -0.11
PAAF1-215ENST00000544909 LRMPQ12912 555 aa14.36□□□□□ -0.11
PAAF1-215ENST00000544909 NT5DC1Q5TFE4 455 aa14.36□□□□□ -0.11
PAAF1-215ENST00000544909 C17orf53Q8N3J3 647 aaPredicted RBP14.36□□□□□ -0.11
PAAF1-215ENST00000544909 DACH1Q9UI36 760 aa14.36□□□□□ -0.11
PAAF1-215ENST00000544909 NIP7Q9Y221 180 aaKnown RBP eCLIP14.36□□□□□ -0.11
PAAF1-215ENST00000544909 SLC4A4Q9Y6R1 1079 aa14.36□□□□□ -0.11
PAAF1-215ENST00000544909 SCN7AQ01118 1682 aa14.35□□□□□ -0.11
PAAF1-215ENST00000544909 TNNT1P13805 278 aa14.35□□□□□ -0.11
PAAF1-215ENST00000544909 PTPREP23469 700 aa14.35□□□□□ -0.11
PAAF1-215ENST00000544909 CCZ1BP86790 482 aa14.35□□□□□ -0.11
PAAF1-215ENST00000544909 CCZ1P86791 482 aaPredicted RBP14.35□□□□□ -0.11
PAAF1-215ENST00000544909 NCAPHQ15003 741 aa14.35□□□□□ -0.11
PAAF1-215ENST00000544909 SHC4Q6S5L8 630 aa14.35□□□□□ -0.11
PAAF1-215ENST00000544909 ANKRD7Q92527 254 aa14.35□□□□□ -0.11
PAAF1-215ENST00000544909 ARMT1Q9H993 441 aa14.35□□□□□ -0.11
PAAF1-215ENST00000544909 RBM28Q9NW13 759 aaKnown RBP14.35□□□□□ -0.11
PAAF1-215ENST00000544909 LRP2BPQ9P2M1 347 aa14.35□□□□□ -0.11
PAAF1-215ENST00000544909 DENND2AQ9ULE3 1009 aa14.35□□□□□ -0.11
PAAF1-215ENST00000544909 SPATA31A5Q5VU36 1347 aa14.35□□□□□ -0.11
PAAF1-215ENST00000544909 SPATA31A7Q8IWB4 1347 aa14.35□□□□□ -0.11
PAAF1-215ENST00000544909 RIOK3O14730 519 aaKnown RBP14.34□□□□□ -0.11
PAAF1-215ENST00000544909 PPARAQ07869 468 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms