RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 COL14A1Q05707 1796 aaKnown RBP15.02□□□□□ -0.01
CPSF7-223ENST00000544669 ANKRD36CQ5JPF3 1778 aa15.02□□□□□ -0.01
CPSF7-223ENST00000544669 LRP5O75197 1615 aa15.02□□□□□ -0.01
CPSF7-223ENST00000544669 NHSL1Q5SYE7 1610 aa15.02□□□□□ -0.01
CPSF7-223ENST00000544669 SMC2O95347 1197 aa15.01□□□□□ -0.01
CPSF7-223ENST00000544669 TDO2P48775 406 aa15.01□□□□□ -0.01
CPSF7-223ENST00000544669 HSPA2P54652 639 aa15.01□□□□□ -0.01
CPSF7-223ENST00000544669 WTAPQ15007 396 aa15.01□□□□□ -0.01
CPSF7-223ENST00000544669 PTPAQ15257 358 aa15.01□□□□□ -0.01
CPSF7-223ENST00000544669 PI16Q6UXB8 463 aa15.01□□□□□ -0.01
CPSF7-223ENST00000544669 MICU3Q86XE3 530 aa15.01□□□□□ -0.01
CPSF7-223ENST00000544669 CCAR2Q8N163 923 aaKnown RBP15.01□□□□□ -0.01
CPSF7-223ENST00000544669 MAGEB6Q8N7X4 407 aa15.01□□□□□ -0.01
CPSF7-223ENST00000544669 NBPF3Q9H094 633 aa15.01□□□□□ -0.01
CPSF7-223ENST00000544669 CCDC87Q9NVE4 849 aa15.01□□□□□ -0.01
CPSF7-223ENST00000544669 ZSWIM5Q9P217 1185 aa15.01□□□□□ -0.01
CPSF7-223ENST00000544669 DDX60Q8IY21 1712 aaKnown RBP15.01□□□□□ -0.01
CPSF7-223ENST00000544669 KIF28PB7ZC32 967 aa15.01□□□□□ -0.01
CPSF7-223ENST00000544669 MBD4O95243 580 aa15.01□□□□□ -0.01
CPSF7-223ENST00000544669 CALM1P0DP23 149 aa15.01□□□□□ -0.01
CPSF7-223ENST00000544669 CALM2P0DP24 149 aa15.01□□□□□ -0.01
CPSF7-223ENST00000544669 CALM3P0DP25 149 aa15.01□□□□□ -0.01
CPSF7-223ENST00000544669 AKAP17AQ02040 695 aaKnown RBP15.01□□□□□ -0.01
CPSF7-223ENST00000544669 RTN1Q16799 776 aa15.01□□□□□ -0.01
CPSF7-223ENST00000544669 DPCR1Q3MIW9 517 aa15.01□□□□□ -0.01
CPSF7-223ENST00000544669 FCHSD1Q86WN1 690 aa15.01□□□□□ -0.01
CPSF7-223ENST00000544669 CNNM3Q8NE01 707 aa15.01□□□□□ -0.01
CPSF7-223ENST00000544669 MAP3K14Q99558 947 aa15.01□□□□□ -0.01
CPSF7-223ENST00000544669 ANAPC4Q9UJX5 808 aa15.01□□□□□ -0.01
CPSF7-223ENST00000544669 KCNH3Q9ULD8 1083 aa15.01□□□□□ -0.01
CPSF7-223ENST00000544669 MMP1P03956 469 aa15□□□□□ -0.01
CPSF7-223ENST00000544669 CCZ1BP86790 482 aa15□□□□□ -0.01
CPSF7-223ENST00000544669 CCZ1P86791 482 aaPredicted RBP15□□□□□ -0.01
CPSF7-223ENST00000544669 MLKLQ8NB16 471 aa15□□□□□ -0.01
CPSF7-223ENST00000544669 ESR2Q92731 530 aa15□□□□□ -0.01
CPSF7-223ENST00000544669 UBAC1Q9BSL1 405 aa15□□□□□ -0.01
CPSF7-223ENST00000544669 WWC3Q9ULE0 1092 aa15□□□□□ -0.01
CPSF7-223ENST00000544669 GOLGA6L9A6NEM1 432 aa14.99□□□□□ -0.01
CPSF7-223ENST00000544669 KRBA2Q6ZNG9 492 aa14.99□□□□□ -0.01
CPSF7-223ENST00000544669 SMARCC1Q92922 1105 aaPredicted RBP14.99□□□□□ -0.01
CPSF7-223ENST00000544669 PYM1Q9BRP8 204 aaKnown RBP14.99□□□□□ -0.01
CPSF7-223ENST00000544669 SLC26A6Q9BXS9 759 aa14.99□□□□□ -0.01
CPSF7-223ENST00000544669 IFNKQ9P0W0 207 aa14.99□□□□□ -0.01
CPSF7-223ENST00000544669 LRP2BPQ9P2M1 347 aa14.99□□□□□ -0.01
CPSF7-223ENST00000544669 SLC4A4Q9Y6R1 1079 aa14.99□□□□□ -0.01
CPSF7-223ENST00000544669 MYH3P11055 1940 aa14.99□□□□□ -0.01
CPSF7-223ENST00000544669 GSG1L2A8MUP6 293 aa14.99□□□□□ -0.01
CPSF7-223ENST00000544669 WDHD1O75717 1129 aaPredicted RBP14.99□□□□□ -0.01
CPSF7-223ENST00000544669 CDC27P30260 824 aa14.99□□□□□ -0.01
CPSF7-223ENST00000544669 FANCCQ00597 558 aa14.99□□□□□ -0.01
CPSF7-223ENST00000544669 RASGRF1Q13972 1273 aa14.99□□□□□ -0.01
CPSF7-223ENST00000544669 CLEC4GQ6UXB4 293 aa14.99□□□□□ -0.01
CPSF7-223ENST00000544669 ZNF710Q8N1W2 664 aa14.99□□□□□ -0.01
CPSF7-223ENST00000544669 ERO1AQ96HE7 468 aa14.99□□□□□ -0.01
CPSF7-223ENST00000544669 RNF26Q9BY78 433 aaPredicted RBP14.99□□□□□ -0.01
CPSF7-223ENST00000544669 XPO4Q9C0E2 1151 aaKnown RBP14.99□□□□□ -0.01
CPSF7-223ENST00000544669 RBM28Q9NW13 759 aaKnown RBP14.99□□□□□ -0.01
CPSF7-223ENST00000544669 ARAP2Q8WZ64 1704 aa14.99□□□□□ -0.01
CPSF7-223ENST00000544669 UBN2Q6ZU65 1347 aa14.98□□□□□ -0.01
CPSF7-223ENST00000544669 AKAP11Q9UKA4 1901 aa14.98□□□□□ -0.01
CPSF7-223ENST00000544669 PLCH1Q4KWH8 1693 aa14.98□□□□□ -0.01
CPSF7-223ENST00000544669 SEMA3EO15041 775 aa14.98□□□□□ -0.01
CPSF7-223ENST00000544669 SERPINC1P01008 464 aa14.98□□□□□ -0.01
CPSF7-223ENST00000544669 PTPREP23469 700 aa14.98□□□□□ -0.01
CPSF7-223ENST00000544669 MARCKSP29966 332 aaPredicted RBP14.98□□□□□ -0.01
CPSF7-223ENST00000544669 SHC4Q6S5L8 630 aa14.98□□□□□ -0.01
CPSF7-223ENST00000544669 SYNE4Q8N205 404 aa14.98□□□□□ -0.01
CPSF7-223ENST00000544669 BRMS1Q9HCU9 246 aa14.98□□□□□ -0.01
CPSF7-223ENST00000544669 NEDD4P46934 1319 aa14.98□□□□□ -0.01
CPSF7-223ENST00000544669 C4AP0C0L4 1744 aa14.98□□□□□ -0.01
CPSF7-223ENST00000544669 C4BP0C0L5 1744 aa14.98□□□□□ -0.01
CPSF7-223ENST00000544669 ZSCAN12O43309 604 aa14.97□□□□□ -0.01
CPSF7-223ENST00000544669 UBASH3AP57075 661 aa14.97□□□□□ -0.01
CPSF7-223ENST00000544669 UBE4AQ14139 1066 aa14.97□□□□□ -0.01
CPSF7-223ENST00000544669 NCAPHQ15003 741 aa14.97□□□□□ -0.01
CPSF7-223ENST00000544669 TMC6Q7Z403 805 aa14.97□□□□□ -0.01
CPSF7-223ENST00000544669 CRACR2BQ8N4Y2 399 aaPredicted RBP14.97□□□□□ -0.01
CPSF7-223ENST00000544669 FANCBQ8NB91 859 aa14.97□□□□□ -0.01
CPSF7-223ENST00000544669 SYTL4Q96C24 671 aaPredicted RBP14.97□□□□□ -0.01
CPSF7-223ENST00000544669 SLC4A9Q96Q91 983 aa14.97□□□□□ -0.01
CPSF7-223ENST00000544669 SRRTQ9BXP5 876 aaKnown RBP14.97□□□□□ -0.01
CPSF7-223ENST00000544669 FAM217BQ9NTX9 383 aaPredicted RBP14.97□□□□□ -0.01
CPSF7-223ENST00000544669 TIAM2Q8IVF5 1701 aa14.97□□□□□ -0.01
CPSF7-223ENST00000544669 ZBTB22O15209 634 aa14.96□□□□□ -0.01
CPSF7-223ENST00000544669 CAVIN4Q5BKX8 364 aa14.96□□□□□ -0.01
CPSF7-223ENST00000544669 PPP4R3BQ5MIZ7 849 aa14.96□□□□□ -0.01
CPSF7-223ENST00000544669 NT5DC1Q5TFE4 455 aa14.96□□□□□ -0.01
CPSF7-223ENST00000544669 SUSD4Q5VX71 490 aa14.96□□□□□ -0.01
CPSF7-223ENST00000544669 NBPF11Q86T75 865 aa14.96□□□□□ -0.01
CPSF7-223ENST00000544669 DIS3L2Q8IYB7 885 aaKnown RBP14.96□□□□□ -0.01
CPSF7-223ENST00000544669 PHKBQ93100 1093 aa14.96□□□□□ -0.01
CPSF7-223ENST00000544669 ARMT1Q9H993 441 aa14.96□□□□□ -0.01
CPSF7-223ENST00000544669 ITGB4P16144 1822 aa14.96□□□□□ -0.01
CPSF7-223ENST00000544669 PPFIA3O75145 1194 aa14.96□□□□□ -0.01
CPSF7-223ENST00000544669 SLU7O95391 586 aaKnown RBP14.96□□□□□ -0.01
CPSF7-223ENST00000544669 IQCA1Q86XH1 822 aa14.96□□□□□ -0.01
CPSF7-223ENST00000544669 EPB41L4AQ9HCS5 686 aaPredicted RBP14.96□□□□□ -0.01
CPSF7-223ENST00000544669 TOMM22Q9NS69 142 aa14.96□□□□□ -0.01
CPSF7-223ENST00000544669 DENND2AQ9ULE3 1009 aa14.96□□□□□ -0.01
CPSF7-223ENST00000544669 SRPRBQ9Y5M8 271 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms