RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 IGF2BP3O00425 579 aaKnown RBP eCLIP17.01■□□□□ 0.31
VAMP1-208ENST00000544432 NAA16Q6N069 864 aaPredicted RBP17.01■□□□□ 0.31
VAMP1-208ENST00000544432 SH3BP5LQ7L8J4 393 aa17.01■□□□□ 0.31
VAMP1-208ENST00000544432 ZKSCAN4Q969J2 545 aaPredicted RBP17.01■□□□□ 0.31
VAMP1-208ENST00000544432 DDX4Q9NQI0 724 aaKnown RBP17.01■□□□□ 0.31
VAMP1-208ENST00000544432 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.01■□□□□ 0.31
VAMP1-208ENST00000544432 OTOFQ9HC10 1997 aa17■□□□□ 0.31
VAMP1-208ENST00000544432 GPR25O00155 361 aa17■□□□□ 0.31
VAMP1-208ENST00000544432 BAG3O95817 575 aa17■□□□□ 0.31
VAMP1-208ENST00000544432 PLCG2P16885 1265 aa17■□□□□ 0.31
VAMP1-208ENST00000544432 INPP5BP32019 993 aa17■□□□□ 0.31
VAMP1-208ENST00000544432 PPATQ06203 517 aa17■□□□□ 0.31
VAMP1-208ENST00000544432 PPIL2Q13356 520 aa17■□□□□ 0.31
VAMP1-208ENST00000544432 NOL9Q5SY16 702 aaKnown RBP17■□□□□ 0.31
VAMP1-208ENST00000544432 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17■□□□□ 0.31
VAMP1-208ENST00000544432 CNKSR2Q8WXI2 1034 aa17■□□□□ 0.31
VAMP1-208ENST00000544432 ABHD8Q96I13 439 aa17■□□□□ 0.31
VAMP1-208ENST00000544432 PTPN18Q99952 460 aa17■□□□□ 0.31
VAMP1-208ENST00000544432 NOL10Q9BSC4 688 aaKnown RBP17■□□□□ 0.31
VAMP1-208ENST00000544432 MCOLN1Q9GZU1 580 aa17■□□□□ 0.31
VAMP1-208ENST00000544432 IL1RAPL2Q9NP60 686 aa17■□□□□ 0.31
VAMP1-208ENST00000544432 PIH1D3Q9NQM4 214 aaKnown RBP17■□□□□ 0.31
VAMP1-208ENST00000544432 DDTLA6NHG4 134 aaPredicted RBP16.99■□□□□ 0.31
VAMP1-208ENST00000544432 PHF20L1A8MW92 1017 aa16.99■□□□□ 0.31
VAMP1-208ENST00000544432 TBC1D12O60347 775 aa16.99■□□□□ 0.31
VAMP1-208ENST00000544432 DGKZQ13574 1117 aa16.99■□□□□ 0.31
VAMP1-208ENST00000544432 ZNF296Q8WUU4 475 aaPredicted RBP16.99■□□□□ 0.31
VAMP1-208ENST00000544432 BRI3BPQ8WY22 251 aa16.99■□□□□ 0.31
VAMP1-208ENST00000544432 OTUD5Q96G74 571 aa16.99■□□□□ 0.31
VAMP1-208ENST00000544432 COL2A1P02458 1487 aaPredicted RBP16.99■□□□□ 0.31
VAMP1-208ENST00000544432 IFIT2P09913 472 aaKnown RBP16.98■□□□□ 0.31
VAMP1-208ENST00000544432 CETPP11597 493 aa16.98■□□□□ 0.31
VAMP1-208ENST00000544432 PICALMQ13492 652 aa16.98■□□□□ 0.31
VAMP1-208ENST00000544432 CTU1Q7Z7A3 348 aaKnown RBP16.98■□□□□ 0.31
VAMP1-208ENST00000544432 ZSCAN29Q8IWY8 852 aaPredicted RBP16.98■□□□□ 0.31
VAMP1-208ENST00000544432 R3HDMLQ9H3Y0 253 aa16.98■□□□□ 0.31
VAMP1-208ENST00000544432 CCL15-CCL14A0A0B4J2E2 113 aa16.97■□□□□ 0.31
VAMP1-208ENST00000544432 IRF6O14896 467 aa16.97■□□□□ 0.31
VAMP1-208ENST00000544432 FKTNO75072 461 aa16.97■□□□□ 0.31
VAMP1-208ENST00000544432 SNAPC2Q13487 334 aa16.97■□□□□ 0.31
VAMP1-208ENST00000544432 CCL15Q16663 113 aa16.97■□□□□ 0.31
VAMP1-208ENST00000544432 CERS3Q8IU89 383 aa16.97■□□□□ 0.31
VAMP1-208ENST00000544432 TEX11Q8IYF3 940 aa16.97■□□□□ 0.31
VAMP1-208ENST00000544432 OSBPL5Q9H0X9 879 aaPredicted RBP16.97■□□□□ 0.31
VAMP1-208ENST00000544432 ZCCHC17Q9NP64 241 aaKnown RBP16.97■□□□□ 0.31
VAMP1-208ENST00000544432 APBB1O00213 710 aa16.96■□□□□ 0.31
VAMP1-208ENST00000544432 CAPN15O75808 1086 aa16.96■□□□□ 0.31
VAMP1-208ENST00000544432 MAP3K12Q12852 859 aa16.96■□□□□ 0.31
VAMP1-208ENST00000544432 TTF1Q15361 905 aaPredicted RBP16.96■□□□□ 0.31
VAMP1-208ENST00000544432 PKN2Q16513 984 aaKnown RBP16.96■□□□□ 0.31
VAMP1-208ENST00000544432 SH3RF3Q8TEJ3 882 aaPredicted RBP16.96■□□□□ 0.31
VAMP1-208ENST00000544432 AATFQ9NY61 560 aaKnown RBP eCLIP16.96■□□□□ 0.31
VAMP1-208ENST00000544432 KCNH4Q9UQ05 1017 aa16.96■□□□□ 0.31
VAMP1-208ENST00000544432 AK9Q5TCS8 1911 aa16.96■□□□□ 0.3
VAMP1-208ENST00000544432 CTNND1O60716 968 aaKnown RBP16.95■□□□□ 0.3
VAMP1-208ENST00000544432 IDH1O75874 414 aaKnown RBP16.95■□□□□ 0.3
VAMP1-208ENST00000544432 CYP7A1P22680 504 aa16.95■□□□□ 0.3
VAMP1-208ENST00000544432 RRP1P56182 461 aaKnown RBP16.95■□□□□ 0.3
VAMP1-208ENST00000544432 CRHR2Q13324 411 aa16.95■□□□□ 0.3
VAMP1-208ENST00000544432 ADGRA1Q86SQ6 560 aa16.95■□□□□ 0.3
VAMP1-208ENST00000544432 SCYL3Q8IZE3 742 aa16.95■□□□□ 0.3
VAMP1-208ENST00000544432 LRRCC1Q9C099 1032 aa16.95■□□□□ 0.3
VAMP1-208ENST00000544432 DHX36Q9H2U1 1008 aaKnown RBP16.95■□□□□ 0.3
VAMP1-208ENST00000544432 DCTPP1Q9H773 170 aa16.95■□□□□ 0.3
VAMP1-208ENST00000544432 CXCL11O14625 94 aa16.94■□□□□ 0.3
VAMP1-208ENST00000544432 ANTXR1Q9H6X2 564 aa16.94■□□□□ 0.3
VAMP1-208ENST00000544432 MAST2Q6P0Q8 1798 aa16.94■□□□□ 0.3
VAMP1-208ENST00000544432 ATP5JP18859 108 aa16.93■□□□□ 0.3
VAMP1-208ENST00000544432 METTL16Q86W50 562 aaKnown RBP16.93■□□□□ 0.3
VAMP1-208ENST00000544432 MAGEB6Q8N7X4 407 aa16.93■□□□□ 0.3
VAMP1-208ENST00000544432 ZFYVE28Q9HCC9 887 aa16.93■□□□□ 0.3
VAMP1-208ENST00000544432 PICK1Q9NRD5 415 aa16.93■□□□□ 0.3
VAMP1-208ENST00000544432 PI4KBQ9UBF8 816 aa16.93■□□□□ 0.3
VAMP1-208ENST00000544432 HERC5Q9UII4 1024 aaKnown RBP16.93■□□□□ 0.3
VAMP1-208ENST00000544432 NDUFB9Q9Y6M9 179 aa16.93■□□□□ 0.3
VAMP1-208ENST00000544432 BTBD19C9JJ37 291 aa16.92■□□□□ 0.3
VAMP1-208ENST00000544432 PTPRAP18433 802 aa16.92■□□□□ 0.3
VAMP1-208ENST00000544432 TAF1CQ15572 869 aaPredicted RBP16.92■□□□□ 0.3
VAMP1-208ENST00000544432 FAM43AQ8N2R8 423 aa16.92■□□□□ 0.3
VAMP1-208ENST00000544432 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.92■□□□□ 0.3
VAMP1-208ENST00000544432 DOCK2Q92608 1830 aa16.91■□□□□ 0.3
VAMP1-208ENST00000544432 ANKRD23Q86SG2 305 aa16.91■□□□□ 0.3
VAMP1-208ENST00000544432 FOXP4Q8IVH2 680 aaPredicted RBP16.91■□□□□ 0.3
VAMP1-208ENST00000544432 TGFBRAP1Q8WUH2 860 aa16.91■□□□□ 0.3
VAMP1-208ENST00000544432 AFG3L2Q9Y4W6 797 aa16.91■□□□□ 0.3
VAMP1-208ENST00000544432 ZHX2Q9Y6X8 837 aa16.91■□□□□ 0.3
VAMP1-208ENST00000544432 FLT1P17948 1338 aa16.91■□□□□ 0.3
VAMP1-208ENST00000544432 SLURP2P0DP57 97 aa16.9■□□□□ 0.3
VAMP1-208ENST00000544432 DYNLL1P63167 89 aaKnown RBP16.9■□□□□ 0.3
VAMP1-208ENST00000544432 SP3Q02447 781 aa16.9■□□□□ 0.3
VAMP1-208ENST00000544432 MOGSQ13724 837 aa16.9■□□□□ 0.3
VAMP1-208ENST00000544432 MAPKAPK5Q8IW41 473 aa16.9■□□□□ 0.3
VAMP1-208ENST00000544432 ERO1AQ96HE7 468 aa16.9■□□□□ 0.3
VAMP1-208ENST00000544432 YTHDC1Q96MU7 727 aaKnown RBP16.9■□□□□ 0.3
VAMP1-208ENST00000544432 HAUS7Q99871 368 aa16.9■□□□□ 0.3
VAMP1-208ENST00000544432 TBC1D2Q9BYX2 928 aa16.9■□□□□ 0.3
VAMP1-208ENST00000544432 PCDHB15Q9Y5E8 787 aa16.9■□□□□ 0.3
VAMP1-208ENST00000544432 MYO5AQ9Y4I1 1855 aaKnown RBP16.9■□□□□ 0.3
VAMP1-208ENST00000544432 CCDC85CA6NKD9 419 aa16.89■□□□□ 0.29
VAMP1-208ENST00000544432 GOLIM4O00461 696 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms