RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 TTC39AQ5SRH9 613 aa13.16□□□□□ -0.3
CHEK1-218ENST00000544373 C20orf194Q5TEA3 1177 aa13.16□□□□□ -0.3
CHEK1-218ENST00000544373 ERO1BQ86YB8 467 aa13.16□□□□□ -0.3
CHEK1-218ENST00000544373 FAM43AQ8N2R8 423 aa13.16□□□□□ -0.3
CHEK1-218ENST00000544373 HOOK2Q96ED9 719 aa13.16□□□□□ -0.3
CHEK1-218ENST00000544373 ZNF112Q9UJU3 913 aa13.16□□□□□ -0.3
CHEK1-218ENST00000544373 OTOFQ9HC10 1997 aa13.16□□□□□ -0.3
CHEK1-218ENST00000544373 ATRNL1Q5VV63 1379 aa13.16□□□□□ -0.3
CHEK1-218ENST00000544373 HTTP42858 3142 aa13.16□□□□□ -0.3
CHEK1-218ENST00000544373 MYH13Q9UKX3 1938 aa13.15□□□□□ -0.3
CHEK1-218ENST00000544373 FKTNO75072 461 aa13.15□□□□□ -0.3
CHEK1-218ENST00000544373 CYP2E1P05181 493 aaPredicted RBP13.15□□□□□ -0.3
CHEK1-218ENST00000544373 GTF2A2P52657 109 aa13.15□□□□□ -0.3
CHEK1-218ENST00000544373 CCDC158Q5M9N0 1113 aa13.15□□□□□ -0.3
CHEK1-218ENST00000544373 SLF2Q8IX21 1173 aa13.15□□□□□ -0.3
CHEK1-218ENST00000544373 SIRT2Q8IXJ6 389 aa13.15□□□□□ -0.3
CHEK1-218ENST00000544373 ZBTB40Q9NUA8 1239 aa13.15□□□□□ -0.3
CHEK1-218ENST00000544373 LRP2BPQ9P2M1 347 aa13.15□□□□□ -0.3
CHEK1-218ENST00000544373 PHF20L1A8MW92 1017 aa13.15□□□□□ -0.31
CHEK1-218ENST00000544373 ENTPD3O75355 529 aa13.15□□□□□ -0.31
CHEK1-218ENST00000544373 ZAP70P43403 619 aa13.15□□□□□ -0.31
CHEK1-218ENST00000544373 CAP1Q01518 475 aa13.15□□□□□ -0.31
CHEK1-218ENST00000544373 NDUFB9Q9Y6M9 179 aa13.15□□□□□ -0.31
CHEK1-218ENST00000544373 MS4A1P11836 297 aa13.14□□□□□ -0.31
CHEK1-218ENST00000544373 OTUD7BQ6GQQ9 843 aa13.14□□□□□ -0.31
CHEK1-218ENST00000544373 ADGRA1Q86SQ6 560 aa13.14□□□□□ -0.31
CHEK1-218ENST00000544373 ZSCAN29Q8IWY8 852 aaPredicted RBP13.14□□□□□ -0.31
CHEK1-218ENST00000544373 ZNF512BQ96KM6 892 aaPredicted RBP13.14□□□□□ -0.31
CHEK1-218ENST00000544373 IL1RAPL2Q9NP60 686 aa13.14□□□□□ -0.31
CHEK1-218ENST00000544373 PIH1D3Q9NQM4 214 aaKnown RBP13.14□□□□□ -0.31
CHEK1-218ENST00000544373 GSTO1P78417 241 aa13.13□□□□□ -0.31
CHEK1-218ENST00000544373 PPIL2Q13356 520 aa13.13□□□□□ -0.31
CHEK1-218ENST00000544373 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.13□□□□□ -0.31
CHEK1-218ENST00000544373 FOXD4L1Q9NU39 408 aa13.13□□□□□ -0.31
CHEK1-218ENST00000544373 DDX19BQ9UMR2 479 aa13.13□□□□□ -0.31
CHEK1-218ENST00000544373 HPS5Q9UPZ3 1129 aa13.13□□□□□ -0.31
CHEK1-218ENST00000544373 BTBD19C9JJ37 291 aa13.12□□□□□ -0.31
CHEK1-218ENST00000544373 APBB1O00213 710 aa13.12□□□□□ -0.31
CHEK1-218ENST00000544373 LDHCP07864 332 aa13.12□□□□□ -0.31
CHEK1-218ENST00000544373 CETPP11597 493 aa13.12□□□□□ -0.31
CHEK1-218ENST00000544373 MAP3K10Q02779 954 aa13.12□□□□□ -0.31
CHEK1-218ENST00000544373 PPATQ06203 517 aa13.12□□□□□ -0.31
CHEK1-218ENST00000544373 SNAPC2Q13487 334 aa13.12□□□□□ -0.31
CHEK1-218ENST00000544373 AACSQ86V21 672 aa13.12□□□□□ -0.31
CHEK1-218ENST00000544373 SH3RF3Q8TEJ3 882 aaPredicted RBP13.12□□□□□ -0.31
CHEK1-218ENST00000544373 CENPFP49454 3210 aa13.12□□□□□ -0.31
CHEK1-218ENST00000544373 FAM196BA6NMK8 535 aa13.12□□□□□ -0.31
CHEK1-218ENST00000544373 TAF1CQ15572 869 aaPredicted RBP13.12□□□□□ -0.31
CHEK1-218ENST00000544373 NOL9Q5SY16 702 aaKnown RBP13.12□□□□□ -0.31
CHEK1-218ENST00000544373 NAA16Q6N069 864 aaPredicted RBP13.12□□□□□ -0.31
CHEK1-218ENST00000544373 RPAP2Q8IXW5 612 aaPredicted RBP13.12□□□□□ -0.31
CHEK1-218ENST00000544373 RHPN1Q8TCX5 695 aa13.12□□□□□ -0.31
CHEK1-218ENST00000544373 CD99L2Q8TCZ2 262 aa13.12□□□□□ -0.31
CHEK1-218ENST00000544373 AATFQ9NY61 560 aaKnown RBP eCLIP13.12□□□□□ -0.31
CHEK1-218ENST00000544373 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.12□□□□□ -0.31
CHEK1-218ENST00000544373 MYH2Q9UKX2 1941 aa13.11□□□□□ -0.31
CHEK1-218ENST00000544373 RGS19P49795 217 aa13.11□□□□□ -0.31
CHEK1-218ENST00000544373 SOX10P56693 466 aa13.11□□□□□ -0.31
CHEK1-218ENST00000544373 MOGSQ13724 837 aa13.11□□□□□ -0.31
CHEK1-218ENST00000544373 PKN2Q16513 984 aaKnown RBP13.11□□□□□ -0.31
CHEK1-218ENST00000544373 OTOP1Q7RTM1 612 aa13.11□□□□□ -0.31
CHEK1-218ENST00000544373 TEX11Q8IYF3 940 aa13.11□□□□□ -0.31
CHEK1-218ENST00000544373 BCL11AQ9H165 835 aa13.11□□□□□ -0.31
CHEK1-218ENST00000544373 ANTXR1Q9H6X2 564 aa13.11□□□□□ -0.31
CHEK1-218ENST00000544373 KCNH4Q9UQ05 1017 aa13.11□□□□□ -0.31
CHEK1-218ENST00000544373 TRIM17Q9Y577 477 aa13.11□□□□□ -0.31
CHEK1-218ENST00000544373 SP3Q02447 781 aa13.1□□□□□ -0.31
CHEK1-218ENST00000544373 FBXO46Q6PJ61 603 aaPredicted RBP13.1□□□□□ -0.31
CHEK1-218ENST00000544373 CCDC84Q86UT8 332 aaPredicted RBP13.1□□□□□ -0.31
CHEK1-218ENST00000544373 ERC1Q8IUD2 1116 aa13.1□□□□□ -0.31
CHEK1-218ENST00000544373 OSBPL5Q9H0X9 879 aaPredicted RBP13.1□□□□□ -0.31
CHEK1-218ENST00000544373 ZFYVE28Q9HCC9 887 aa13.1□□□□□ -0.31
CHEK1-218ENST00000544373 PTPRAP18433 802 aa13.09□□□□□ -0.31
CHEK1-218ENST00000544373 DYNLL1P63167 89 aaKnown RBP13.09□□□□□ -0.31
CHEK1-218ENST00000544373 SCYL3Q8IZE3 742 aa13.09□□□□□ -0.31
CHEK1-218ENST00000544373 ZHX2Q9Y6X8 837 aa13.09□□□□□ -0.31
CHEK1-218ENST00000544373 BRCA2P51587 3418 aa13.09□□□□□ -0.31
CHEK1-218ENST00000544373 IDH1O75874 414 aaKnown RBP13.08□□□□□ -0.31
CHEK1-218ENST00000544373 PPP4CP60510 307 aa13.08□□□□□ -0.31
CHEK1-218ENST00000544373 PDE3AQ14432 1141 aa13.08□□□□□ -0.31
CHEK1-218ENST00000544373 RRP1BQ14684 758 aaKnown RBP13.08□□□□□ -0.31
CHEK1-218ENST00000544373 MAPKAPK5Q8IW41 473 aa13.08□□□□□ -0.31
CHEK1-218ENST00000544373 TGFBRAP1Q8WUH2 860 aa13.08□□□□□ -0.31
CHEK1-218ENST00000544373 LAMB1P07942 1786 aa13.08□□□□□ -0.32
CHEK1-218ENST00000544373 PDHXO00330 501 aa13.08□□□□□ -0.32
CHEK1-218ENST00000544373 TBC1D12O60347 775 aa13.08□□□□□ -0.32
CHEK1-218ENST00000544373 TLR2O60603 784 aa13.08□□□□□ -0.32
CHEK1-218ENST00000544373 CTNND1O60716 968 aaKnown RBP13.08□□□□□ -0.32
CHEK1-218ENST00000544373 BAG3O95817 575 aa13.08□□□□□ -0.32
CHEK1-218ENST00000544373 MAP4K4O95819 1239 aaPredicted RBP13.08□□□□□ -0.32
CHEK1-218ENST00000544373 CYP7A1P22680 504 aa13.08□□□□□ -0.32
CHEK1-218ENST00000544373 HSP90AB4PQ58FF6 505 aa13.08□□□□□ -0.32
CHEK1-218ENST00000544373 POTEHQ6S545 545 aa13.08□□□□□ -0.32
CHEK1-218ENST00000544373 KIF1BPQ96EK5 621 aa13.08□□□□□ -0.32
CHEK1-218ENST00000544373 ERO1AQ96HE7 468 aa13.08□□□□□ -0.32
CHEK1-218ENST00000544373 ARHGAP39Q9C0H5 1083 aa13.08□□□□□ -0.32
CHEK1-218ENST00000544373 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.08□□□□□ -0.32
CHEK1-218ENST00000544373 PICK1Q9NRD5 415 aa13.08□□□□□ -0.32
CHEK1-218ENST00000544373 AFG3L2Q9Y4W6 797 aa13.08□□□□□ -0.32
CHEK1-218ENST00000544373 HMMRO75330 724 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms