RNA–Protein interactions for RNA: ENST00000544299.5

CHERP-202, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-202ENST00000544299 MINDY4BA8MYZ0 360 aa21.38■■□□□ 1.01
CHERP-202ENST00000544299 F8W031 263 aaPredicted RBP21.38■■□□□ 1.01
CHERP-202ENST00000544299 ZNF277Q9NRM2 450 aaPredicted RBP21.38■■□□□ 1.01
CHERP-202ENST00000544299 USP17L3A6NCW0 530 aa21.38■■□□□ 1.01
CHERP-202ENST00000544299 USP17L4A6NCW7 530 aa21.38■■□□□ 1.01
CHERP-202ENST00000544299 USP17L12C9JPN9 530 aa21.38■■□□□ 1.01
CHERP-202ENST00000544299 USP17L21D6R901 530 aa21.38■■□□□ 1.01
CHERP-202ENST00000544299 CYP2D6P10635 497 aa21.38■■□□□ 1.01
CHERP-202ENST00000544299 TRDNQ13061 729 aa21.38■■□□□ 1.01
CHERP-202ENST00000544299 SBK1Q52WX2 424 aa21.38■■□□□ 1.01
CHERP-202ENST00000544299 USP17L1Q7RTZ2 530 aa21.38■■□□□ 1.01
CHERP-202ENST00000544299 CERS3Q8IU89 383 aa21.38■■□□□ 1.01
CHERP-202ENST00000544299 NOL10Q9BSC4 688 aaKnown RBP21.38■■□□□ 1.01
CHERP-202ENST00000544299 APOBRQ0VD83 1088 aa21.37■■□□□ 1.01
CHERP-202ENST00000544299 MFSD6Q6ZSS7 791 aa21.37■■□□□ 1.01
CHERP-202ENST00000544299 KLHL34Q8N239 644 aa21.37■■□□□ 1.01
CHERP-202ENST00000544299 FGRP09769 529 aa21.36■■□□□ 1.01
CHERP-202ENST00000544299 EVCP57679 992 aa21.36■■□□□ 1.01
CHERP-202ENST00000544299 RAB3GAP1Q15042 981 aa21.36■■□□□ 1.01
CHERP-202ENST00000544299 CNNM2Q9H8M5 875 aa21.36■■□□□ 1.01
CHERP-202ENST00000544299 SCNN1DP51172 638 aa21.36■■□□□ 1.01
CHERP-202ENST00000544299 FGD1P98174 961 aa21.36■■□□□ 1.01
CHERP-202ENST00000544299 TGFBRAP1Q8WUH2 860 aa21.36■■□□□ 1.01
CHERP-202ENST00000544299 KRT23Q9C075 422 aa21.36■■□□□ 1.01
CHERP-202ENST00000544299 VPS33BQ9H267 617 aa21.36■■□□□ 1.01
CHERP-202ENST00000544299 ARPP21Q9UBL0 812 aaPredicted RBP21.36■■□□□ 1.01
CHERP-202ENST00000544299 USP17L8P0C7I0 530 aa21.35■■□□□ 1.01
CHERP-202ENST00000544299 PLCG2P16885 1265 aa21.35■■□□□ 1.01
CHERP-202ENST00000544299 USP5P45974 858 aa21.35■■□□□ 1.01
CHERP-202ENST00000544299 NUCB2P80303 420 aa21.35■■□□□ 1.01
CHERP-202ENST00000544299 HHIPL2Q6UWX4 724 aa21.35■■□□□ 1.01
CHERP-202ENST00000544299 TEX11Q8IYF3 940 aa21.35■■□□□ 1.01
CHERP-202ENST00000544299 STK11IPQ8N1F8 1099 aa21.35■■□□□ 1.01
CHERP-202ENST00000544299 NLGN2Q8NFZ4 835 aa21.35■■□□□ 1.01
CHERP-202ENST00000544299 GTF3C6Q969F1 213 aa21.35■■□□□ 1.01
CHERP-202ENST00000544299 RNF41Q9H4P4 317 aaPredicted RBP21.35■■□□□ 1.01
CHERP-202ENST00000544299 ZSWIM5Q9P217 1185 aa21.35■■□□□ 1.01
CHERP-202ENST00000544299 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.35■■□□□ 1.01
CHERP-202ENST00000544299 SH2B2O14492 632 aaPredicted RBP21.34■■□□□ 1.01
CHERP-202ENST00000544299 PFKFB2O60825 505 aa21.34■■□□□ 1.01
CHERP-202ENST00000544299 KDM4AO75164 1064 aa21.34■■□□□ 1.01
CHERP-202ENST00000544299 PKP1Q13835 747 aa21.34■■□□□ 1.01
CHERP-202ENST00000544299 LARGE2Q8N3Y3 721 aa21.34■■□□□ 1.01
CHERP-202ENST00000544299 MCM9Q9NXL9 1143 aa21.34■■□□□ 1.01
CHERP-202ENST00000544299 ARFGEF1Q9Y6D6 1849 aa21.34■■□□□ 1.01
CHERP-202ENST00000544299 NFKBIEO00221 500 aa21.33■■□□□ 1.01
CHERP-202ENST00000544299 STK3Q13188 491 aa21.33■■□□□ 1.01
CHERP-202ENST00000544299 C12orf60Q5U649 245 aa21.33■■□□□ 1.01
CHERP-202ENST00000544299 KIAA0825Q8IV33 1275 aa21.33■■□□□ 1.01
CHERP-202ENST00000544299 MAPKAPK5Q8IW41 473 aa21.33■■□□□ 1.01
CHERP-202ENST00000544299 BRPF3Q9ULD4 1205 aa21.33■■□□□ 1.01
CHERP-202ENST00000544299 ZDHHC9Q9Y397 364 aa21.33■■□□□ 1.01
CHERP-202ENST00000544299 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.33■■□□□ 1.01
CHERP-202ENST00000544299 ECM29Q5VYK3 1845 aa21.33■■□□□ 1.01
CHERP-202ENST00000544299 ROBO3Q96MS0 1386 aa21.33■■□□□ 1
CHERP-202ENST00000544299 DTNBO60941 627 aa21.33■■□□□ 1
CHERP-202ENST00000544299 IARSP41252 1262 aaKnown RBP21.33■■□□□ 1
CHERP-202ENST00000544299 APOBEC3HQ6NTF7 200 aaKnown RBP21.33■■□□□ 1
CHERP-202ENST00000544299 CLEC17AQ6ZS10 378 aa21.33■■□□□ 1
CHERP-202ENST00000544299 IGDCC4Q8TDY8 1250 aa21.33■■□□□ 1
CHERP-202ENST00000544299 MRIQ9BWK5 157 aa21.33■■□□□ 1
CHERP-202ENST00000544299 FLT1P17948 1338 aa21.32■■□□□ 1
CHERP-202ENST00000544299 PDIA3P30101 505 aaKnown RBP21.32■■□□□ 1
CHERP-202ENST00000544299 CRKP46108 304 aa21.32■■□□□ 1
CHERP-202ENST00000544299 RRP12Q5JTH9 1297 aaKnown RBP21.32■■□□□ 1
CHERP-202ENST00000544299 TEKT1Q969V4 418 aa21.32■■□□□ 1
CHERP-202ENST00000544299 ZNF274Q96GC6 653 aaPredicted RBP21.32■■□□□ 1
CHERP-202ENST00000544299 TMEM87BQ96K49 555 aa21.32■■□□□ 1
CHERP-202ENST00000544299 SENP2Q9HC62 589 aa21.32■■□□□ 1
CHERP-202ENST00000544299 SPON1Q9HCB6 807 aa21.32■■□□□ 1
CHERP-202ENST00000544299 MYH1P12882 1939 aa21.31■■□□□ 1
CHERP-202ENST00000544299 PCP11498 1178 aaKnown RBP21.31■■□□□ 1
CHERP-202ENST00000544299 HDLBPQ00341 1268 aaKnown RBP21.31■■□□□ 1
CHERP-202ENST00000544299 SCRN1Q12765 414 aa21.31■■□□□ 1
CHERP-202ENST00000544299 SKOR2Q2VWA4 1001 aaPredicted RBP21.31■■□□□ 1
CHERP-202ENST00000544299 ZDHHC15Q96MV8 337 aa21.31■■□□□ 1
CHERP-202ENST00000544299 LY9Q9HBG7 655 aa21.31■■□□□ 1
CHERP-202ENST00000544299 ANGEL1Q9UNK9 670 aaKnown RBP21.31■■□□□ 1
CHERP-202ENST00000544299 SMC3Q9UQE7 1217 aa21.31■■□□□ 1
CHERP-202ENST00000544299 BCS1LQ9Y276 419 aa21.31■■□□□ 1
CHERP-202ENST00000544299 PCDHAC2Q9Y5I4 1007 aa21.31■■□□□ 1
CHERP-202ENST00000544299 ORC4O43929 436 aa21.31■■□□□ 1
CHERP-202ENST00000544299 TNPO1Q92973 898 aaKnown RBP21.31■■□□□ 1
CHERP-202ENST00000544299 TAOK3Q9H2K8 898 aa21.31■■□□□ 1
CHERP-202ENST00000544299 TOMM22Q9NS69 142 aa21.31■■□□□ 1
CHERP-202ENST00000544299 HPS5Q9UPZ3 1129 aa21.31■■□□□ 1
CHERP-202ENST00000544299 GOLGA6L22H0YM25 854 aa21.3■■□□□ 1
CHERP-202ENST00000544299 WDHD1O75717 1129 aaPredicted RBP21.3■■□□□ 1
CHERP-202ENST00000544299 CDC42EP5Q6NZY7 148 aa21.3■■□□□ 1
CHERP-202ENST00000544299 GMLQ99445 158 aa21.3■■□□□ 1
CHERP-202ENST00000544299 SAP30BPQ9UHR5 308 aaKnown RBP21.3■■□□□ 1
CHERP-202ENST00000544299 KLF18A0A0U1RQI7 1052 aa21.29■■□□□ 1
CHERP-202ENST00000544299 PRDM1O75626 825 aa21.29■■□□□ 1
CHERP-202ENST00000544299 VIL1P09327 827 aaKnown RBP21.29■■□□□ 1
CHERP-202ENST00000544299 SLC4A8Q2Y0W8 1093 aa21.29■■□□□ 1
CHERP-202ENST00000544299 NIM1KQ8IY84 436 aa21.29■■□□□ 1
CHERP-202ENST00000544299 ESR2Q92731 530 aa21.29■■□□□ 1
CHERP-202ENST00000544299 MTA3Q9BTC8 594 aa21.29■■□□□ 1
CHERP-202ENST00000544299 ZNRF3Q9ULT6 936 aa21.29■■□□□ 1
CHERP-202ENST00000544299 LTBP3Q9NS15 1303 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms