RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 ZNF827Q17R98 1081 aa18.3■□□□□ 0.52
SNRNP70-203ENST00000544278 TTF1Q15361 905 aaPredicted RBP18.3■□□□□ 0.52
SNRNP70-203ENST00000544278 NOM1Q5C9Z4 860 aaKnown RBP18.3■□□□□ 0.52
SNRNP70-203ENST00000544278 MAP7D2Q96T17 732 aa18.3■□□□□ 0.52
SNRNP70-203ENST00000544278 AKAP11Q9UKA4 1901 aa18.29■□□□□ 0.52
SNRNP70-203ENST00000544278 DHX16O60231 1041 aaKnown RBP18.29■□□□□ 0.52
SNRNP70-203ENST00000544278 NTSR2O95665 410 aa18.29■□□□□ 0.52
SNRNP70-203ENST00000544278 ARID4AP29374 1257 aaPredicted RBP18.29■□□□□ 0.52
SNRNP70-203ENST00000544278 STX1AQ16623 288 aa18.29■□□□□ 0.52
SNRNP70-203ENST00000544278 CCDC152Q4G0S7 254 aa18.29■□□□□ 0.52
SNRNP70-203ENST00000544278 DHX40Q8IX18 779 aaKnown RBP18.29■□□□□ 0.52
SNRNP70-203ENST00000544278 LINC00116Q8NCU8 138 aa18.29■□□□□ 0.52
SNRNP70-203ENST00000544278 PATL2C9JE40 543 aaKnown RBP18.29■□□□□ 0.52
SNRNP70-203ENST00000544278 ATP1A3P13637 1013 aa18.29■□□□□ 0.52
SNRNP70-203ENST00000544278 UQCRFS1P1P0C7P4 283 aa18.28■□□□□ 0.52
SNRNP70-203ENST00000544278 SMAP1Q8IYB5 467 aaPredicted RBP18.28■□□□□ 0.52
SNRNP70-203ENST00000544278 TDRD7Q8NHU6 1098 aaKnown RBP18.28■□□□□ 0.52
SNRNP70-203ENST00000544278 RTEL1Q9NZ71 1219 aa18.28■□□□□ 0.52
SNRNP70-203ENST00000544278 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.28■□□□□ 0.527e-13■□□□□ 10.5
SNRNP70-203ENST00000544278 V9GYY5 206 aaPredicted RBP18.28■□□□□ 0.52
SNRNP70-203ENST00000544278 COBLO75128 1261 aa18.28■□□□□ 0.52
SNRNP70-203ENST00000544278 CASP1P29466 404 aa18.28■□□□□ 0.52
SNRNP70-203ENST00000544278 RBM43Q6ZSC3 357 aaKnown RBP18.28■□□□□ 0.52
SNRNP70-203ENST00000544278 TBC1D9BQ66K14 1250 aa18.28■□□□□ 0.52
SNRNP70-203ENST00000544278 USP49Q70CQ1 688 aa18.28■□□□□ 0.52
SNRNP70-203ENST00000544278 SPATA31A1Q5TZJ5 1347 aa18.28■□□□□ 0.52
SNRNP70-203ENST00000544278 SLC3A2P08195 630 aaKnown RBP18.27■□□□□ 0.52
SNRNP70-203ENST00000544278 FAM47AQ5JRC9 791 aa18.27■□□□□ 0.52
SNRNP70-203ENST00000544278 AKNAD1Q5T1N1 836 aa18.27■□□□□ 0.52
SNRNP70-203ENST00000544278 ADALQ6DHV7 355 aa18.27■□□□□ 0.52
SNRNP70-203ENST00000544278 TXNRD3Q86VQ6 643 aa18.27■□□□□ 0.52
SNRNP70-203ENST00000544278 ZMYM6O95789 1325 aa18.27■□□□□ 0.52
SNRNP70-203ENST00000544278 MROH5Q6ZUA9 1318 aa18.27■□□□□ 0.52
SNRNP70-203ENST00000544278 GOLGA6L6A8MZA4 724 aa18.27■□□□□ 0.52
SNRNP70-203ENST00000544278 ERVV-1B6SEH8 477 aa18.27■□□□□ 0.52
SNRNP70-203ENST00000544278 RIOK3O14730 519 aaKnown RBP18.27■□□□□ 0.52
SNRNP70-203ENST00000544278 CYP2D6P10635 497 aa18.27■□□□□ 0.52
SNRNP70-203ENST00000544278 PLA2G4DQ86XP0 818 aa18.27■□□□□ 0.52
SNRNP70-203ENST00000544278 FBXO3Q9UK99 471 aa18.27■□□□□ 0.52
SNRNP70-203ENST00000544278 AXDND1Q5T1B0 1012 aaPredicted RBP18.27■□□□□ 0.51
SNRNP70-203ENST00000544278 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.26■□□□□ 0.51
SNRNP70-203ENST00000544278 NTRK3Q16288 839 aa18.26■□□□□ 0.51
SNRNP70-203ENST00000544278 SHC4Q6S5L8 630 aa18.26■□□□□ 0.51
SNRNP70-203ENST00000544278 STAMQ92783 540 aa18.26■□□□□ 0.51
SNRNP70-203ENST00000544278 AATFQ9NY61 560 aaKnown RBP eCLIP18.26■□□□□ 0.513e-10■■□□□ 14
SNRNP70-203ENST00000544278 IFNKQ9P0W0 207 aa18.26■□□□□ 0.51
SNRNP70-203ENST00000544278 VPS54Q9P1Q0 977 aa18.26■□□□□ 0.51
SNRNP70-203ENST00000544278 TRIM29Q14134 588 aa18.26■□□□□ 0.51
SNRNP70-203ENST00000544278 WTAPQ15007 396 aa18.26■□□□□ 0.51
SNRNP70-203ENST00000544278 NUP98P52948 1817 aa18.26■□□□□ 0.51
SNRNP70-203ENST00000544278 MYH14Q7Z406 1995 aaKnown RBP18.25■□□□□ 0.51
SNRNP70-203ENST00000544278 CEP57L1Q8IYX8 460 aa18.25■□□□□ 0.51
SNRNP70-203ENST00000544278 NGLY1Q96IV0 654 aa18.25■□□□□ 0.51
SNRNP70-203ENST00000544278 VEGFAP15692 232 aaPredicted RBP18.25■□□□□ 0.51
SNRNP70-203ENST00000544278 EVCP57679 992 aa18.25■□□□□ 0.51
SNRNP70-203ENST00000544278 TPD52L1Q16890 204 aaPredicted RBP18.25■□□□□ 0.51
SNRNP70-203ENST00000544278 DIS3L2Q8IYB7 885 aaKnown RBP18.25■□□□□ 0.51
SNRNP70-203ENST00000544278 KIAA1468Q9P260 1216 aa18.25■□□□□ 0.51
SNRNP70-203ENST00000544278 PRDX5P30044 214 aa18.25■□□□□ 0.51
SNRNP70-203ENST00000544278 SYKP43405 635 aa18.25■□□□□ 0.51
SNRNP70-203ENST00000544278 ANKRD18AQ8IVF6 992 aa18.25■□□□□ 0.51
SNRNP70-203ENST00000544278 ANO10Q9NW15 660 aa18.25■□□□□ 0.51
SNRNP70-203ENST00000544278 DISP2A7MBM2 1401 aa18.24■□□□□ 0.51
SNRNP70-203ENST00000544278 ZBTB22O15209 634 aa18.24■□□□□ 0.51
SNRNP70-203ENST00000544278 SSRP1Q08945 709 aaKnown RBP18.24■□□□□ 0.51
SNRNP70-203ENST00000544278 LONRF3Q496Y0 759 aa18.24■□□□□ 0.51
SNRNP70-203ENST00000544278 CPLX2Q6PUV4 134 aaKnown RBP18.24■□□□□ 0.51
SNRNP70-203ENST00000544278 ZNF384Q8TF68 577 aa18.24■□□□□ 0.51
SNRNP70-203ENST00000544278 ABCA3Q99758 1704 aa18.24■□□□□ 0.51
SNRNP70-203ENST00000544278 RTN1Q16799 776 aa18.24■□□□□ 0.51
SNRNP70-203ENST00000544278 TMC6Q7Z403 805 aa18.24■□□□□ 0.51
SNRNP70-203ENST00000544278 PLCD3Q8N3E9 789 aa18.24■□□□□ 0.51
SNRNP70-203ENST00000544278 XPO4Q9C0E2 1151 aaKnown RBP18.24■□□□□ 0.51
SNRNP70-203ENST00000544278 PCDHB6Q9Y5E3 794 aa18.24■□□□□ 0.51
SNRNP70-203ENST00000544278 WNT7AO00755 349 aa18.23■□□□□ 0.51
SNRNP70-203ENST00000544278 PLEKHA8P1O95397 391 aa18.23■□□□□ 0.51
SNRNP70-203ENST00000544278 ZSCAN20P17040 1043 aaPredicted RBP18.23■□□□□ 0.51
SNRNP70-203ENST00000544278 PPARAQ07869 468 aa18.23■□□□□ 0.51
SNRNP70-203ENST00000544278 EARS2Q5JPH6 523 aaKnown RBP18.23■□□□□ 0.51
SNRNP70-203ENST00000544278 TRMT44Q8IYL2 757 aaKnown RBP18.23■□□□□ 0.51
SNRNP70-203ENST00000544278 UBAC1Q9BSL1 405 aa18.23■□□□□ 0.51
SNRNP70-203ENST00000544278 TMX1Q9H3N1 280 aa18.23■□□□□ 0.51
SNRNP70-203ENST00000544278 CABP5Q9NP86 173 aa18.23■□□□□ 0.51
SNRNP70-203ENST00000544278 GNPATO15228 680 aa18.23■□□□□ 0.51
SNRNP70-203ENST00000544278 MAGEB6P1A0A0J9YX57 407 aa18.23■□□□□ 0.51
SNRNP70-203ENST00000544278 ADAMTS3O15072 1205 aa18.23■□□□□ 0.51
SNRNP70-203ENST00000544278 KCNG4Q8TDN1 519 aa18.23■□□□□ 0.51
SNRNP70-203ENST00000544278 DPF2Q92785 391 aa18.23■□□□□ 0.51
SNRNP70-203ENST00000544278 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.23■□□□□ 0.51
SNRNP70-203ENST00000544278 TNKSO95271 1327 aa18.22■□□□□ 0.51
SNRNP70-203ENST00000544278 USP17L12C9JPN9 530 aa18.22■□□□□ 0.51
SNRNP70-203ENST00000544278 USP17L21D6R901 530 aa18.22■□□□□ 0.51
SNRNP70-203ENST00000544278 SHISA4Q96DD7 197 aa18.22■□□□□ 0.51
SNRNP70-203ENST00000544278 MINPP1Q9UNW1 487 aa18.22■□□□□ 0.51
SNRNP70-203ENST00000544278 ABCC12Q96J65 1359 aa18.22■□□□□ 0.51
SNRNP70-203ENST00000544278 ABCC6O95255 1503 aa18.22■□□□□ 0.51
SNRNP70-203ENST00000544278 PAPPAQ13219 1627 aa18.22■□□□□ 0.51
SNRNP70-203ENST00000544278 SKILP12757 684 aa18.22■□□□□ 0.51
SNRNP70-203ENST00000544278 TNNT1P13805 278 aa18.22■□□□□ 0.51
SNRNP70-203ENST00000544278 FOXP4Q8IVH2 680 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms