RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 PASKQ96RG2 1323 aa16.4■□□□□ 0.22
SP140-213ENST00000543928 HIP1O00291 1037 aa16.39■□□□□ 0.21
SP140-213ENST00000543928 USP5P45974 858 aa16.39■□□□□ 0.21
SP140-213ENST00000543928 MAPKAPK5Q8IW41 473 aa16.39■□□□□ 0.21
SP140-213ENST00000543928 ZFPM1Q8IX07 1006 aa16.39■□□□□ 0.21
SP140-213ENST00000543928 FAM151AQ8WW52 585 aa16.39■□□□□ 0.21
SP140-213ENST00000543928 FAM227BQ96M60 508 aa16.39■□□□□ 0.21
SP140-213ENST00000543928 DIAPH3Q9NSV4 1193 aa16.39■□□□□ 0.21
SP140-213ENST00000543928 CDK5RAP2Q96SN8 1893 aa16.39■□□□□ 0.21
SP140-213ENST00000543928 A0A0D9SFI3 127 aa16.38■□□□□ 0.21
SP140-213ENST00000543928 GPAA1O43292 621 aa16.38■□□□□ 0.21
SP140-213ENST00000543928 PRKAB2O43741 272 aa16.38■□□□□ 0.21
SP140-213ENST00000543928 CDAN1Q8IWY9 1227 aa16.38■□□□□ 0.21
SP140-213ENST00000543928 TEPSINQ96N21 525 aa16.38■□□□□ 0.21
SP140-213ENST00000543928 STRBPQ96SI9 672 aaKnown RBP16.38■□□□□ 0.21
SP140-213ENST00000543928 ZNF408Q9H9D4 720 aa16.38■□□□□ 0.21
SP140-213ENST00000543928 HELLSQ9NRZ9 838 aa16.38■□□□□ 0.21
SP140-213ENST00000543928 FLT1P17948 1338 aa16.38■□□□□ 0.21
SP140-213ENST00000543928 CELF2O95319 508 aaKnown RBP16.37■□□□□ 0.21
SP140-213ENST00000543928 NBPF12Q5TAG4 269 aaPredicted RBP16.37■□□□□ 0.21
SP140-213ENST00000543928 CWC27Q6UX04 472 aaKnown RBP16.37■□□□□ 0.21
SP140-213ENST00000543928 CCDC129Q6ZRS4 1044 aa16.37■□□□□ 0.21
SP140-213ENST00000543928 SDR42E1Q8WUS8 393 aa16.37■□□□□ 0.21
SP140-213ENST00000543928 OSBPL5Q9H0X9 879 aaPredicted RBP16.37■□□□□ 0.21
SP140-213ENST00000543928 SLC4A4Q9Y6R1 1079 aa16.37■□□□□ 0.21
SP140-213ENST00000543928 FOCADQ5VW36 1801 aa16.37■□□□□ 0.21
SP140-213ENST00000543928 RPAP1Q9BWH6 1393 aaPredicted RBP16.37■□□□□ 0.21
SP140-213ENST00000543928 SUPT20HL1Q3ZLR7 823 aa16.36■□□□□ 0.21
SP140-213ENST00000543928 MCMDC2Q4G0Z9 681 aa16.36■□□□□ 0.21
SP140-213ENST00000543928 SH3BP5LQ7L8J4 393 aa16.36■□□□□ 0.21
SP140-213ENST00000543928 ZSCAN29Q8IWY8 852 aaPredicted RBP16.36■□□□□ 0.21
SP140-213ENST00000543928 TRPM7Q96QT4 1865 aa16.35■□□□□ 0.21
SP140-213ENST00000543928 DDTLA6NHG4 134 aaPredicted RBP16.35■□□□□ 0.21
SP140-213ENST00000543928 CHMLP26374 656 aa16.35■□□□□ 0.21
SP140-213ENST00000543928 NF2P35240 595 aa16.35■□□□□ 0.21
SP140-213ENST00000543928 C1QTNF8P60827 252 aa16.35■□□□□ 0.21
SP140-213ENST00000543928 DCP1AQ9NPI6 582 aaPredicted RBP16.35■□□□□ 0.21
SP140-213ENST00000543928 SAP30BPQ9UHR5 308 aaKnown RBP16.35■□□□□ 0.21
SP140-213ENST00000543928 SSC5DA1L4H1 1573 aa16.34■□□□□ 0.21
SP140-213ENST00000543928 GNAT2P19087 354 aa16.34■□□□□ 0.21
SP140-213ENST00000543928 CST9Q5W186 159 aa16.34■□□□□ 0.21
SP140-213ENST00000543928 ZNF589Q86UQ0 364 aaPredicted RBP16.34■□□□□ 0.21
SP140-213ENST00000543928 CSRNP1Q96S65 589 aa16.34■□□□□ 0.21
SP140-213ENST00000543928 ATP8A2Q9NTI2 1148 aa16.34■□□□□ 0.21
SP140-213ENST00000543928 MKRN1Q9UHC7 482 aaKnown RBP16.34■□□□□ 0.21
SP140-213ENST00000543928 PALD1Q9ULE6 856 aa16.34■□□□□ 0.21
SP140-213ENST00000543928 ATRNL1Q5VV63 1379 aa16.34■□□□□ 0.21
SP140-213ENST00000543928 COL2A1P02458 1487 aaPredicted RBP16.34■□□□□ 0.21
SP140-213ENST00000543928 NAV1Q8NEY1 1877 aa16.33■□□□□ 0.21
SP140-213ENST00000543928 GSG1L2A8MUP6 293 aa16.33■□□□□ 0.2
SP140-213ENST00000543928 APLP1P51693 650 aa16.33■□□□□ 0.2
SP140-213ENST00000543928 PRKG1Q13976 671 aa16.33■□□□□ 0.2
SP140-213ENST00000543928 SLC4A8Q2Y0W8 1093 aa16.33■□□□□ 0.2
SP140-213ENST00000543928 DDRGK1Q96HY6 314 aa16.33■□□□□ 0.2
SP140-213ENST00000543928 DHX36Q9H2U1 1008 aaKnown RBP16.33■□□□□ 0.2
SP140-213ENST00000543928 GBA2Q9HCG7 927 aaPredicted RBP16.33■□□□□ 0.2
SP140-213ENST00000543928 MCM9Q9NXL9 1143 aa16.33■□□□□ 0.2
SP140-213ENST00000543928 FZD1Q9UP38 647 aa16.33■□□□□ 0.2
SP140-213ENST00000543928 CCDC171Q6TFL3 1326 aa16.33■□□□□ 0.2
SP140-213ENST00000543928 MYH1P12882 1939 aa16.33■□□□□ 0.2
SP140-213ENST00000543928 TMEM88BA6NKF7 163 aa16.32■□□□□ 0.2
SP140-213ENST00000543928 APPP05067 770 aa16.32■□□□□ 0.2
SP140-213ENST00000543928 TTLL12Q14166 644 aaPredicted RBP16.32■□□□□ 0.2
SP140-213ENST00000543928 MIGA2Q7L4E1 593 aa16.32■□□□□ 0.2
SP140-213ENST00000543928 RUFY2Q8WXA3 655 aa16.32■□□□□ 0.2
SP140-213ENST00000543928 HOOK2Q96ED9 719 aa16.32■□□□□ 0.2
SP140-213ENST00000543928 DDX60LQ5H9U9 1706 aaKnown RBP16.31■□□□□ 0.2
SP140-213ENST00000543928 RAD50Q92878 1312 aa16.31■□□□□ 0.2
SP140-213ENST00000543928 PATL2C9JE40 543 aaKnown RBP16.31■□□□□ 0.2
SP140-213ENST00000543928 CDC45O75419 566 aa16.31■□□□□ 0.2
SP140-213ENST00000543928 POLR3DP05423 398 aaPredicted RBP16.31■□□□□ 0.2
SP140-213ENST00000543928 MFAP1P55081 439 aaKnown RBP16.31■□□□□ 0.2
SP140-213ENST00000543928 VPS53Q5VIR6 699 aa16.31■□□□□ 0.2
SP140-213ENST00000543928 GIMAP6Q6P9H5 292 aa16.31■□□□□ 0.2
SP140-213ENST00000543928 MOB2Q70IA6 237 aa16.31■□□□□ 0.2
SP140-213ENST00000543928 IFNL3Q8IZI9 196 aa16.31■□□□□ 0.2
SP140-213ENST00000543928 C2orf69Q8N8R5 385 aa16.31■□□□□ 0.2
SP140-213ENST00000543928 IL25Q9H293 177 aa16.31■□□□□ 0.2
SP140-213ENST00000543928 EPB41L4AQ9HCS5 686 aaPredicted RBP16.31■□□□□ 0.2
SP140-213ENST00000543928 PI4KBQ9UBF8 816 aa16.31■□□□□ 0.2
SP140-213ENST00000543928 BAZ2AQ9UIF9 1905 aaKnown RBP16.31■□□□□ 0.2
SP140-213ENST00000543928 FOXP2O15409 715 aa16.3■□□□□ 0.2
SP140-213ENST00000543928 PPP1R12BO60237 982 aaPredicted RBP16.3■□□□□ 0.2
SP140-213ENST00000543928 HLA-DOAP06340 250 aa16.3■□□□□ 0.2
SP140-213ENST00000543928 SLURP2P0DP57 97 aa16.3■□□□□ 0.2
SP140-213ENST00000543928 TDO2P48775 406 aa16.3■□□□□ 0.2
SP140-213ENST00000543928 FKBP1BP68106 108 aa16.3■□□□□ 0.2
SP140-213ENST00000543928 DCAF15Q66K64 600 aa16.3■□□□□ 0.2
SP140-213ENST00000543928 TTC6Q86TZ1 520 aa16.3■□□□□ 0.2
SP140-213ENST00000543928 NACAP1Q9BZK3 213 aa16.3■□□□□ 0.2
SP140-213ENST00000543928 ANGEL1Q9UNK9 670 aaKnown RBP16.3■□□□□ 0.2
SP140-213ENST00000543928 PAPPA2Q9BXP8 1791 aa16.3■□□□□ 0.2
SP140-213ENST00000543928 CYP2D7A0A087X1C5 515 aa16.29■□□□□ 0.2
SP140-213ENST00000543928 USP17L12C9JPN9 530 aa16.29■□□□□ 0.2
SP140-213ENST00000543928 USP17L21D6R901 530 aa16.29■□□□□ 0.2
SP140-213ENST00000543928 SGSM2O43147 1006 aa16.29■□□□□ 0.2
SP140-213ENST00000543928 USP2O75604 605 aaPredicted RBP16.29■□□□□ 0.2
SP140-213ENST00000543928 CYP2D6P10635 497 aa16.29■□□□□ 0.2
SP140-213ENST00000543928 HSPD1P10809 573 aaKnown RBP16.29■□□□□ 0.2
SP140-213ENST00000543928 PLCD1P51178 756 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms