RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 PTPRAP18433 802 aa28.05■■■□□ 2.08
CDKN3-207ENST00000543789 MAP3K10Q02779 954 aa28.05■■■□□ 2.08
CDKN3-207ENST00000543789 RASGRF1Q13972 1273 aa28.05■■■□□ 2.08
CDKN3-207ENST00000543789 ATRNL1Q5VV63 1379 aa28.05■■■□□ 2.08
CDKN3-207ENST00000543789 SPTY2D1Q68D10 685 aaPredicted RBP28.05■■■□□ 2.08
CDKN3-207ENST00000543789 SH3BP5LQ7L8J4 393 aa28.05■■■□□ 2.08
CDKN3-207ENST00000543789 FCGRTP55899 365 aa28.04■■■□□ 2.08
CDKN3-207ENST00000543789 COLQQ9Y215 455 aaPredicted RBP28.04■■■□□ 2.08
CDKN3-207ENST00000543789 AKAP2Q9Y2D5 859 aa28.04■■■□□ 2.08
CDKN3-207ENST00000543789 AFG3L2Q9Y4W6 797 aa28.04■■■□□ 2.08
CDKN3-207ENST00000543789 PDS5AQ29RF7 1337 aaKnown RBP28.03■■■□□ 2.08
CDKN3-207ENST00000543789 A0A0G2JLL6 359 aaPredicted RBP28.03■■■□□ 2.08
CDKN3-207ENST00000543789 PRRT2Q7Z6L0 340 aaPredicted RBP28.03■■■□□ 2.08
CDKN3-207ENST00000543789 NKX2-3Q8TAU0 364 aa28.03■■■□□ 2.08
CDKN3-207ENST00000543789 A0A1B0GUL7 405 aa28.02■■■□□ 2.08
CDKN3-207ENST00000543789 DDTLA6NHG4 134 aaPredicted RBP28.02■■■□□ 2.08
CDKN3-207ENST00000543789 H0YGN5 161 aa28.02■■■□□ 2.08
CDKN3-207ENST00000543789 CTNND1O60716 968 aaKnown RBP28.02■■■□□ 2.08
CDKN3-207ENST00000543789 XAGE2Q96GT9 111 aa28.02■■■□□ 2.08
CDKN3-207ENST00000543789 BIN2Q9UBW5 565 aaPredicted RBP28.02■■■□□ 2.08
CDKN3-207ENST00000543789 BTDP43251 543 aa28.01■■■□□ 2.07
CDKN3-207ENST00000543789 FXR1P51114 621 aaKnown RBP eCLIP28.01■■■□□ 2.07
CDKN3-207ENST00000543789 PRKCZQ05513 592 aa28.01■■■□□ 2.07
CDKN3-207ENST00000543789 PICALMQ13492 652 aa28.01■■■□□ 2.07
CDKN3-207ENST00000543789 MVPQ14764 893 aaKnown RBP28.01■■■□□ 2.07
CDKN3-207ENST00000543789 SHISA4Q96DD7 197 aa28.01■■■□□ 2.07
CDKN3-207ENST00000543789 DDX4Q9NQI0 724 aaKnown RBP28.01■■■□□ 2.07
CDKN3-207ENST00000543789 SRGAP3O43295 1099 aa28■■■□□ 2.07
CDKN3-207ENST00000543789 GJB1P08034 283 aa28■■■□□ 2.07
CDKN3-207ENST00000543789 GNAI3P08754 354 aa28■■■□□ 2.07
CDKN3-207ENST00000543789 CCL5P13501 91 aa28■■■□□ 2.07
CDKN3-207ENST00000543789 UBXN2AP68543 259 aa28■■■□□ 2.07
CDKN3-207ENST00000543789 TFCP2Q12800 502 aa28■■■□□ 2.07
CDKN3-207ENST00000543789 GADL1Q6ZQY3 521 aa28■■■□□ 2.07
CDKN3-207ENST00000543789 ERICH6Q7L0X2 663 aa28■■■□□ 2.07
CDKN3-207ENST00000543789 ARHGAP45Q92619 1136 aa28■■■□□ 2.07
CDKN3-207ENST00000543789 SLC45A1Q9Y2W3 748 aa28■■■□□ 2.07
CDKN3-207ENST00000543789 GJA8P48165 433 aa27.99■■■□□ 2.07
CDKN3-207ENST00000543789 RARSP54136 660 aaKnown RBP27.99■■■□□ 2.07
CDKN3-207ENST00000543789 RNF208Q9H0X6 261 aa27.99■■■□□ 2.07
CDKN3-207ENST00000543789 ZSWIM8A7E2V4 1837 aa27.99■■■□□ 2.07
CDKN3-207ENST00000543789 RFX7Q2KHR2 1363 aa27.99■■■□□ 2.07
CDKN3-207ENST00000543789 MROH7-TTC4A0A0A0MT08 1334 aa27.98■■■□□ 2.07
CDKN3-207ENST00000543789 GPR75-ASB3A0A0A6YYF3 556 aa27.98■■■□□ 2.07
CDKN3-207ENST00000543789 SLURP2P0DP57 97 aa27.98■■■□□ 2.07
CDKN3-207ENST00000543789 MECOMQ03112 1051 aa27.98■■■□□ 2.07
CDKN3-207ENST00000543789 SLAIN1Q8ND83 568 aa27.98■■■□□ 2.07
CDKN3-207ENST00000543789 DPF3Q92784 378 aa27.98■■■□□ 2.07
CDKN3-207ENST00000543789 NEUROD6Q96NK8 337 aa27.97■■■□□ 2.07
CDKN3-207ENST00000543789 GABRQQ9UN88 632 aa27.97■■■□□ 2.07
CDKN3-207ENST00000543789 TRIM75PA6NK02 468 aa27.96■■■□□ 2.07
CDKN3-207ENST00000543789 TBC1D12O60347 775 aa27.96■■■□□ 2.07
CDKN3-207ENST00000543789 RHBDL3P58872 404 aa27.96■■■□□ 2.07
CDKN3-207ENST00000543789 MTX1Q13505 466 aa27.96■■■□□ 2.07
CDKN3-207ENST00000543789 NPM3O75607 178 aaKnown RBP27.95■■■□□ 2.06
CDKN3-207ENST00000543789 SMCR8Q8TEV9 937 aaPredicted RBP27.95■■■□□ 2.06
CDKN3-207ENST00000543789 LDHCP07864 332 aa27.94■■■□□ 2.06
CDKN3-207ENST00000543789 GSTO1P78417 241 aa27.94■■■□□ 2.06
CDKN3-207ENST00000543789 GORABQ5T7V8 394 aa27.94■■■□□ 2.06
CDKN3-207ENST00000543789 UBE2Q1Q7Z7E8 422 aa27.94■■■□□ 2.06
CDKN3-207ENST00000543789 ZNF384Q8TF68 577 aa27.94■■■□□ 2.06
CDKN3-207ENST00000543789 HMG20BQ9P0W2 317 aa27.94■■■□□ 2.06
CDKN3-207ENST00000543789 AK9Q5TCS8 1911 aa27.94■■■□□ 2.06
CDKN3-207ENST00000543789 MYH13Q9UKX3 1938 aa27.94■■■□□ 2.06
CDKN3-207ENST00000543789 ADCY3O60266 1144 aa27.93■■■□□ 2.06
CDKN3-207ENST00000543789 MAP4K4O95819 1239 aaPredicted RBP27.93■■■□□ 2.06
CDKN3-207ENST00000543789 FLT3LGP49771 235 aa27.93■■■□□ 2.06
CDKN3-207ENST00000543789 SPATA5Q8NB90 893 aa27.93■■■□□ 2.06
CDKN3-207ENST00000543789 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.93■■■□□ 2.06
CDKN3-207ENST00000543789 AGTPBP1Q9UPW5 1226 aa27.93■■■□□ 2.06
CDKN3-207ENST00000543789 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.93■■■□□ 2.06
CDKN3-207ENST00000543789 TNPO2O14787 897 aaKnown RBP27.92■■■□□ 2.06
CDKN3-207ENST00000543789 U2AF1L4Q8WU68 220 aaKnown RBP27.92■■■□□ 2.06
CDKN3-207ENST00000543789 HTATIP2Q9BUP3 242 aa27.92■■■□□ 2.06
CDKN3-207ENST00000543789 UNC93B1Q9H1C4 597 aa27.92■■■□□ 2.06
CDKN3-207ENST00000543789 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.92■■■□□ 2.06
CDKN3-207ENST00000543789 TBC1D9Q6ZT07 1266 aa27.91■■■□□ 2.06
CDKN3-207ENST00000543789 CCDC84Q86UT8 332 aaPredicted RBP27.91■■■□□ 2.06
CDKN3-207ENST00000543789 PXYLP1Q8TE99 480 aa27.91■■■□□ 2.06
CDKN3-207ENST00000543789 NSUN4Q96CB9 384 aaKnown RBP27.91■■■□□ 2.06
CDKN3-207ENST00000543789 OSBPL5Q9H0X9 879 aaPredicted RBP27.91■■■□□ 2.06
CDKN3-207ENST00000543789 IPO8O15397 1037 aaKnown RBP27.9■■■□□ 2.06
CDKN3-207ENST00000543789 PI16Q6UXB8 463 aa27.9■■■□□ 2.06
CDKN3-207ENST00000543789 CHRDL2Q6WN34 429 aa27.9■■■□□ 2.06
CDKN3-207ENST00000543789 RAI14Q9P0K7 980 aa27.9■■■□□ 2.06
CDKN3-207ENST00000543789 SGPL1O95470 568 aa27.89■■■□□ 2.06
CDKN3-207ENST00000543789 GNAI2P04899 355 aa27.89■■■□□ 2.06
CDKN3-207ENST00000543789 G3BP1Q13283 466 aaKnown RBP eCLIP27.89■■■□□ 2.06
CDKN3-207ENST00000543789 IRF5Q13568 498 aa27.89■■■□□ 2.06
CDKN3-207ENST00000543789 ANKRD13CQ8N6S4 541 aa27.89■■■□□ 2.06
CDKN3-207ENST00000543789 PNMA3Q9UL41 463 aa27.89■■■□□ 2.06
CDKN3-207ENST00000543789 FAM196BA6NMK8 535 aa27.88■■■□□ 2.05
CDKN3-207ENST00000543789 INHAP05111 366 aa27.88■■■□□ 2.05
CDKN3-207ENST00000543789 ELNP15502 786 aa27.88■■■□□ 2.05
CDKN3-207ENST00000543789 SPP2Q13103 211 aa27.88■■■□□ 2.05
CDKN3-207ENST00000543789 TREML2Q5T2D2 321 aa27.88■■■□□ 2.05
CDKN3-207ENST00000543789 PROCA1Q8NCQ7 364 aaPredicted RBP27.88■■■□□ 2.05
CDKN3-207ENST00000543789 COA7Q96BR5 231 aa27.88■■■□□ 2.05
CDKN3-207ENST00000543789 FARP2O94887 1054 aaPredicted RBP27.87■■■□□ 2.05
CDKN3-207ENST00000543789 ARID4AP29374 1257 aaPredicted RBP27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms