RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 DDTLA6NHG4 134 aaPredicted RBP13.41□□□□□ -0.26
DDB1-222ENST00000543627 ENTPD3O75355 529 aa13.41□□□□□ -0.26
DDB1-222ENST00000543627 WDHD1O75717 1129 aaPredicted RBP13.41□□□□□ -0.26
DDB1-222ENST00000543627 TRPA1O75762 1119 aa13.41□□□□□ -0.26
DDB1-222ENST00000543627 SLURP2P0DP57 97 aa13.41□□□□□ -0.26
DDB1-222ENST00000543627 ATP5JP18859 108 aa13.41□□□□□ -0.26
DDB1-222ENST00000543627 USP5P45974 858 aa13.41□□□□□ -0.26
DDB1-222ENST00000543627 RHBDL3P58872 404 aa13.41□□□□□ -0.26
DDB1-222ENST00000543627 IDI2Q9BXS1 227 aa13.41□□□□□ -0.26
DDB1-222ENST00000543627 ECHDC1Q9NTX5 307 aa13.41□□□□□ -0.26
DDB1-222ENST00000543627 SAP30BPQ9UHR5 308 aaKnown RBP13.41□□□□□ -0.26
DDB1-222ENST00000543627 PLCG2P16885 1265 aa13.4□□□□□ -0.26
DDB1-222ENST00000543627 VGLL4Q14135 290 aa13.4□□□□□ -0.26
DDB1-222ENST00000543627 MAP3K11Q16584 847 aa13.4□□□□□ -0.26
DDB1-222ENST00000543627 SLFNL1Q499Z3 407 aa13.4□□□□□ -0.26
DDB1-222ENST00000543627 SPRYD7Q5W111 196 aa13.4□□□□□ -0.26
DDB1-222ENST00000543627 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.4□□□□□ -0.26
DDB1-222ENST00000543627 CNKSR2Q8WXI2 1034 aa13.4□□□□□ -0.26
DDB1-222ENST00000543627 OPTNQ96CV9 577 aa13.4□□□□□ -0.26
DDB1-222ENST00000543627 OTUD5Q96G74 571 aa13.4□□□□□ -0.26
DDB1-222ENST00000543627 WNK4Q96J92 1243 aa13.4□□□□□ -0.26
DDB1-222ENST00000543627 AKAP11Q9UKA4 1901 aa13.4□□□□□ -0.26
DDB1-222ENST00000543627 ZNF532Q9HCE3 1301 aa13.39□□□□□ -0.27
DDB1-222ENST00000543627 MAGEB6P1A0A0J9YX57 407 aa13.39□□□□□ -0.27
DDB1-222ENST00000543627 FAM196BA6NMK8 535 aa13.39□□□□□ -0.27
DDB1-222ENST00000543627 INPP5BP32019 993 aa13.39□□□□□ -0.27
DDB1-222ENST00000543627 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.39□□□□□ -0.27
DDB1-222ENST00000543627 SH3BP5LQ7L8J4 393 aa13.39□□□□□ -0.27
DDB1-222ENST00000543627 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.39□□□□□ -0.27
DDB1-222ENST00000543627 OTUD7AQ8TE49 926 aaPredicted RBP13.39□□□□□ -0.27
DDB1-222ENST00000543627 GCC1Q96CN9 775 aa13.39□□□□□ -0.27
DDB1-222ENST00000543627 HAUS7Q99871 368 aa13.39□□□□□ -0.27
DDB1-222ENST00000543627 TRIM34Q9BYJ4 488 aa13.39□□□□□ -0.27
DDB1-222ENST00000543627 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.39□□□□□ -0.27
DDB1-222ENST00000543627 MYO5AQ9Y4I1 1855 aaKnown RBP13.38□□□□□ -0.27
DDB1-222ENST00000543627 IGHDP01880 384 aa13.38□□□□□ -0.27
DDB1-222ENST00000543627 HSPA8P11142 646 aaKnown RBP13.38□□□□□ -0.27
DDB1-222ENST00000543627 PDE6AP16499 860 aa13.38□□□□□ -0.27
DDB1-222ENST00000543627 SREBF2Q12772 1141 aa13.38□□□□□ -0.27
DDB1-222ENST00000543627 HDAC1Q13547 482 aaPredicted RBP13.38□□□□□ -0.27
DDB1-222ENST00000543627 COL13A1Q5TAT6 717 aaPredicted RBP13.38□□□□□ -0.27
DDB1-222ENST00000543627 LNPKQ9C0E8 428 aa13.38□□□□□ -0.27
DDB1-222ENST00000543627 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.38□□□□□ -0.272e-11■□□□□ 9.4
DDB1-222ENST00000543627 OSBPL5Q9H0X9 879 aaPredicted RBP13.38□□□□□ -0.27
DDB1-222ENST00000543627 RNF186Q9NXI6 227 aa13.38□□□□□ -0.27
DDB1-222ENST00000543627 TBC1D8O95759 1140 aa13.37□□□□□ -0.27
DDB1-222ENST00000543627 PPP4CP60510 307 aa13.37□□□□□ -0.27
DDB1-222ENST00000543627 AAMPQ13685 434 aa13.37□□□□□ -0.27
DDB1-222ENST00000543627 CRACR2BQ8N4Y2 399 aaPredicted RBP13.37□□□□□ -0.27
DDB1-222ENST00000543627 PALD1Q9ULE6 856 aa13.37□□□□□ -0.27
DDB1-222ENST00000543627 MANSC4A6NHS7 340 aaPredicted RBP13.36□□□□□ -0.27
DDB1-222ENST00000543627 ERC2O15083 957 aa13.36□□□□□ -0.27
DDB1-222ENST00000543627 CHGBP05060 677 aa13.36□□□□□ -0.27
DDB1-222ENST00000543627 GJA5P36382 358 aa13.36□□□□□ -0.27
DDB1-222ENST00000543627 REM2Q8IYK8 340 aaPredicted RBP13.36□□□□□ -0.27
DDB1-222ENST00000543627 ARMT1Q9H993 441 aa13.36□□□□□ -0.27
DDB1-222ENST00000543627 PICK1Q9NRD5 415 aa13.36□□□□□ -0.27
DDB1-222ENST00000543627 RPAP1Q9BWH6 1393 aaPredicted RBP13.35□□□□□ -0.27
DDB1-222ENST00000543627 UNCXA6NJT0 531 aa13.35□□□□□ -0.27
DDB1-222ENST00000543627 CA12O43570 354 aa13.35□□□□□ -0.27
DDB1-222ENST00000543627 POLR3DP05423 398 aaPredicted RBP13.35□□□□□ -0.27
DDB1-222ENST00000543627 HLA-DOAP06340 250 aa13.35□□□□□ -0.27
DDB1-222ENST00000543627 ZBTB48P10074 688 aaPredicted RBP13.35□□□□□ -0.27
DDB1-222ENST00000543627 MX1P20591 662 aa13.35□□□□□ -0.27
DDB1-222ENST00000543627 ZSCAN25Q6NSZ9 544 aa13.35□□□□□ -0.27
DDB1-222ENST00000543627 ERO1BQ86YB8 467 aa13.35□□□□□ -0.27
DDB1-222ENST00000543627 SNCAIPQ9Y6H5 919 aa13.35□□□□□ -0.27
DDB1-222ENST00000543627 FLT1P17948 1338 aa13.35□□□□□ -0.27
DDB1-222ENST00000543627 CCL15-CCL14A0A0B4J2E2 113 aa13.34□□□□□ -0.27
DDB1-222ENST00000543627 IGSF3O75054 1194 aa13.34□□□□□ -0.27
DDB1-222ENST00000543627 MBD4O95243 580 aa13.34□□□□□ -0.27
DDB1-222ENST00000543627 ADD2P35612 726 aa13.34□□□□□ -0.27
DDB1-222ENST00000543627 TM4SF4P48230 202 aa13.34□□□□□ -0.27
DDB1-222ENST00000543627 CCL15Q16663 113 aa13.34□□□□□ -0.27
DDB1-222ENST00000543627 OTUD7BQ6GQQ9 843 aa13.34□□□□□ -0.27
DDB1-222ENST00000543627 LCORLQ8N3X6 602 aa13.34□□□□□ -0.27
DDB1-222ENST00000543627 SDR42E1Q8WUS8 393 aa13.34□□□□□ -0.27
DDB1-222ENST00000543627 FSD1Q9BTV5 496 aa13.34□□□□□ -0.27
DDB1-222ENST00000543627 CRNKL1Q9BZJ0 848 aaKnown RBP13.34□□□□□ -0.27
DDB1-222ENST00000543627 DHX36Q9H2U1 1008 aaKnown RBP13.34□□□□□ -0.27
DDB1-222ENST00000543627 PI4KBQ9UBF8 816 aa13.34□□□□□ -0.27
DDB1-222ENST00000543627 SPDYE5A6NIY4 337 aa13.33□□□□□ -0.28
DDB1-222ENST00000543627 IRF6O14896 467 aa13.33□□□□□ -0.28
DDB1-222ENST00000543627 GLRX3O76003 335 aaKnown RBP13.33□□□□□ -0.28
DDB1-222ENST00000543627 GTF2A2P52657 109 aa13.33□□□□□ -0.28
DDB1-222ENST00000543627 INHBEP58166 350 aa13.33□□□□□ -0.28
DDB1-222ENST00000543627 CCDC84Q86UT8 332 aaPredicted RBP13.33□□□□□ -0.28
DDB1-222ENST00000543627 IFNL1Q8IU54 200 aa13.33□□□□□ -0.28
DDB1-222ENST00000543627 CERS3Q8IU89 383 aa13.33□□□□□ -0.28
DDB1-222ENST00000543627 TNS4Q8IZW8 715 aa13.33□□□□□ -0.28
DDB1-222ENST00000543627 MCM9Q9NXL9 1143 aa13.33□□□□□ -0.28
DDB1-222ENST00000543627 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.33□□□□□ -0.28
DDB1-222ENST00000543627 ZHX2Q9Y6X8 837 aa13.33□□□□□ -0.28
DDB1-222ENST00000543627 TTC41PQ6P2S7 1318 aa13.33□□□□□ -0.28
DDB1-222ENST00000543627 TCRBV5S4A2TA0A5A2 114 aa13.32□□□□□ -0.28
DDB1-222ENST00000543627 PHF20L1A8MW92 1017 aa13.32□□□□□ -0.28
DDB1-222ENST00000543627 TRIM6-TRIM34B2RNG4 842 aa13.32□□□□□ -0.28
DDB1-222ENST00000543627 PRKAB2O43741 272 aa13.32□□□□□ -0.28
DDB1-222ENST00000543627 NPM3O75607 178 aaKnown RBP13.32□□□□□ -0.28
DDB1-222ENST00000543627 CHD1LQ86WJ1 897 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms