RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 SDSP20132 328 aa7.58□□□□□ -1.2
LTBR-212ENST00000543542 APLP1P51693 650 aa7.58□□□□□ -1.2
LTBR-212ENST00000543542 MFAP1P55081 439 aaKnown RBP7.58□□□□□ -1.2
LTBR-212ENST00000543542 RHBDL3P58872 404 aa7.58□□□□□ -1.2
LTBR-212ENST00000543542 NMIQ13287 307 aaPredicted RBP7.58□□□□□ -1.2
LTBR-212ENST00000543542 SLC4A8Q2Y0W8 1093 aa7.58□□□□□ -1.2
LTBR-212ENST00000543542 FKBP1CQ5VVH2 108 aa7.58□□□□□ -1.2
LTBR-212ENST00000543542 CASC1Q6TDU7 716 aa7.58□□□□□ -1.2
LTBR-212ENST00000543542 CWC27Q6UX04 472 aaKnown RBP7.58□□□□□ -1.2
LTBR-212ENST00000543542 LCORLQ8N3X6 602 aa7.58□□□□□ -1.2
LTBR-212ENST00000543542 CRACR2BQ8N4Y2 399 aaPredicted RBP7.58□□□□□ -1.2
LTBR-212ENST00000543542 RUFY2Q8WXA3 655 aa7.58□□□□□ -1.2
LTBR-212ENST00000543542 CSRNP1Q96S65 589 aa7.58□□□□□ -1.2
LTBR-212ENST00000543542 SEC62Q99442 399 aaKnown RBP7.58□□□□□ -1.2
LTBR-212ENST00000543542 IDI2Q9BXS1 227 aa7.58□□□□□ -1.2
LTBR-212ENST00000543542 PUS7LQ9H0K6 701 aaKnown RBP7.58□□□□□ -1.2
LTBR-212ENST00000543542 HELLSQ9NRZ9 838 aa7.58□□□□□ -1.2
LTBR-212ENST00000543542 FAM198AQ9UFP1 575 aa7.58□□□□□ -1.2
LTBR-212ENST00000543542 SAP30BPQ9UHR5 308 aaKnown RBP7.58□□□□□ -1.2
LTBR-212ENST00000543542 MYH1P12882 1939 aa7.58□□□□□ -1.2
LTBR-212ENST00000543542 RFX7Q2KHR2 1363 aa7.58□□□□□ -1.2
LTBR-212ENST00000543542 FOCADQ5VW36 1801 aa7.57□□□□□ -1.2
LTBR-212ENST00000543542 FLT1P17948 1338 aa7.57□□□□□ -1.2
LTBR-212ENST00000543542 M0R2C6 588 aa7.57□□□□□ -1.2
LTBR-212ENST00000543542 GPAA1O43292 621 aa7.57□□□□□ -1.2
LTBR-212ENST00000543542 WDHD1O75717 1129 aaPredicted RBP7.57□□□□□ -1.2
LTBR-212ENST00000543542 GNAT2P19087 354 aa7.57□□□□□ -1.2
LTBR-212ENST00000543542 IREB2P48200 963 aaKnown RBP7.57□□□□□ -1.2
LTBR-212ENST00000543542 TDO2P48775 406 aa7.57□□□□□ -1.2
LTBR-212ENST00000543542 MCMDC2Q4G0Z9 681 aa7.57□□□□□ -1.2
LTBR-212ENST00000543542 ZMYM1Q5SVZ6 1142 aa7.57□□□□□ -1.2
LTBR-212ENST00000543542 NBPF12Q5TAG4 269 aaPredicted RBP7.57□□□□□ -1.2
LTBR-212ENST00000543542 DCAF15Q66K64 600 aa7.57□□□□□ -1.2
LTBR-212ENST00000543542 CCDC129Q6ZRS4 1044 aa7.57□□□□□ -1.2
LTBR-212ENST00000543542 ARMC9Q7Z3E5 817 aa7.57□□□□□ -1.2
LTBR-212ENST00000543542 SDR42E1Q8WUS8 393 aa7.57□□□□□ -1.2
LTBR-212ENST00000543542 OSBP2Q969R2 916 aa7.57□□□□□ -1.2
LTBR-212ENST00000543542 FAM227BQ96M60 508 aa7.57□□□□□ -1.2
LTBR-212ENST00000543542 RIOK1Q9BRS2 568 aaKnown RBP7.57□□□□□ -1.2
LTBR-212ENST00000543542 NACAP1Q9BZK3 213 aa7.57□□□□□ -1.2
LTBR-212ENST00000543542 OSBPL5Q9H0X9 879 aaPredicted RBP7.57□□□□□ -1.2
LTBR-212ENST00000543542 GBA2Q9HCG7 927 aaPredicted RBP7.57□□□□□ -1.2
LTBR-212ENST00000543542 DDX4Q9NQI0 724 aaKnown RBP7.57□□□□□ -1.2
LTBR-212ENST00000543542 MCM9Q9NXL9 1143 aa7.57□□□□□ -1.2
LTBR-212ENST00000543542 ANGEL1Q9UNK9 670 aaKnown RBP7.57□□□□□ -1.2
LTBR-212ENST00000543542 CNTNAP1P78357 1384 aa7.57□□□□□ -1.2
LTBR-212ENST00000543542 PASKQ96RG2 1323 aa7.56□□□□□ -1.2
LTBR-212ENST00000543542 A0A0D9SFI3 127 aa7.56□□□□□ -1.2
LTBR-212ENST00000543542 PRKAB2O43741 272 aa7.56□□□□□ -1.2
LTBR-212ENST00000543542 GRM1Q13255 1194 aa7.56□□□□□ -1.2
LTBR-212ENST00000543542 BMP2KLQ5H9B9 411 aa7.56□□□□□ -1.2
LTBR-212ENST00000543542 MIGA2Q7L4E1 593 aa7.56□□□□□ -1.2
LTBR-212ENST00000543542 TTC6Q86TZ1 520 aa7.56□□□□□ -1.2
LTBR-212ENST00000543542 TICAM2Q86XR7 235 aa7.56□□□□□ -1.2
LTBR-212ENST00000543542 ZFPM1Q8IX07 1006 aa7.56□□□□□ -1.2
LTBR-212ENST00000543542 STRBPQ96SI9 672 aaKnown RBP7.56□□□□□ -1.2
LTBR-212ENST00000543542 ZNF341Q9BYN7 854 aa7.56□□□□□ -1.2
LTBR-212ENST00000543542 NAPBQ9H115 298 aa7.56□□□□□ -1.2
LTBR-212ENST00000543542 DHX36Q9H2U1 1008 aaKnown RBP7.56□□□□□ -1.2
LTBR-212ENST00000543542 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.56□□□□□ -1.2
LTBR-212ENST00000543542 ATP8A2Q9NTI2 1148 aa7.56□□□□□ -1.2
LTBR-212ENST00000543542 PALD1Q9ULE6 856 aa7.56□□□□□ -1.2
LTBR-212ENST00000543542 RPAP1Q9BWH6 1393 aaPredicted RBP7.56□□□□□ -1.2
LTBR-212ENST00000543542 CCDC171Q6TFL3 1326 aa7.55□□□□□ -1.2
LTBR-212ENST00000543542 BAZ2AQ9UIF9 1905 aaKnown RBP7.55□□□□□ -1.2
LTBR-212ENST00000543542 DDTLA6NHG4 134 aaPredicted RBP7.55□□□□□ -1.2
LTBR-212ENST00000543542 MINDY4BA8MYZ0 360 aa7.55□□□□□ -1.2
LTBR-212ENST00000543542 PATL2C9JE40 543 aaKnown RBP7.55□□□□□ -1.2
LTBR-212ENST00000543542 UBE2Q2LH0YL09 131 aa7.55□□□□□ -1.2
LTBR-212ENST00000543542 CDC45O75419 566 aa7.55□□□□□ -1.2
LTBR-212ENST00000543542 NPM3O75607 178 aaKnown RBP7.55□□□□□ -1.2
LTBR-212ENST00000543542 HSPA6P17066 643 aa7.55□□□□□ -1.2
LTBR-212ENST00000543542 HUNKP57058 714 aa7.55□□□□□ -1.2
LTBR-212ENST00000543542 FKBP1BP68106 108 aa7.55□□□□□ -1.2
LTBR-212ENST00000543542 CST9Q5W186 159 aa7.55□□□□□ -1.2
LTBR-212ENST00000543542 KIAA1211Q6ZU35 1233 aa7.55□□□□□ -1.2
LTBR-212ENST00000543542 MOB2Q70IA6 237 aa7.55□□□□□ -1.2
LTBR-212ENST00000543542 CDAN1Q8IWY9 1227 aa7.55□□□□□ -1.2
LTBR-212ENST00000543542 STK11IPQ8N1F8 1099 aa7.55□□□□□ -1.2
LTBR-212ENST00000543542 TEPSINQ96N21 525 aa7.55□□□□□ -1.2
LTBR-212ENST00000543542 DCP1AQ9NPI6 582 aaPredicted RBP7.55□□□□□ -1.2
LTBR-212ENST00000543542 CREBZFQ9NS37 354 aa7.55□□□□□ -1.2
LTBR-212ENST00000543542 PI4KBQ9UBF8 816 aa7.55□□□□□ -1.2
LTBR-212ENST00000543542 FZD1Q9UP38 647 aa7.55□□□□□ -1.2
LTBR-212ENST00000543542 CSADQ9Y600 493 aa7.55□□□□□ -1.2
LTBR-212ENST00000543542 PAPPA2Q9BXP8 1791 aa7.55□□□□□ -1.2
LTBR-212ENST00000543542 FAM196BA6NMK8 535 aa7.54□□□□□ -1.2
LTBR-212ENST00000543542 SLC3A2P08195 630 aaKnown RBP7.54□□□□□ -1.2
LTBR-212ENST00000543542 CHMLP26374 656 aa7.54□□□□□ -1.2
LTBR-212ENST00000543542 ZNF157P51786 506 aaPredicted RBP7.54□□□□□ -1.2
LTBR-212ENST00000543542 DEFB115Q30KQ5 88 aa7.54□□□□□ -1.2
LTBR-212ENST00000543542 SH3BP5LQ7L8J4 393 aa7.54□□□□□ -1.2
LTBR-212ENST00000543542 FOXP4Q8IVH2 680 aaPredicted RBP7.54□□□□□ -1.2
LTBR-212ENST00000543542 IFNL3Q8IZI9 196 aa7.54□□□□□ -1.2
LTBR-212ENST00000543542 WRNIP1Q96S55 665 aa7.54□□□□□ -1.2
LTBR-212ENST00000543542 ARPP21Q9UBL0 812 aaPredicted RBP7.54□□□□□ -1.2
LTBR-212ENST00000543542 HERC5Q9UII4 1024 aaKnown RBP7.54□□□□□ -1.2
LTBR-212ENST00000543542 SERPINB13Q9UIV8 391 aa7.54□□□□□ -1.2
LTBR-212ENST00000543542 COL2A1P02458 1487 aaPredicted RBP7.54□□□□□ -1.2
LTBR-212ENST00000543542 MYH8P13535 1937 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms