RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 SYNRGQ9UMZ2 1314 aa21.8■■□□□ 1.08
SUDS3-204ENST00000543473 KBTBD3Q8NAB2 608 aa21.8■■□□□ 1.08
SUDS3-204ENST00000543473 TMEM94Q12767 1356 aa21.8■■□□□ 1.08
SUDS3-204ENST00000543473 HOOK3Q86VS8 718 aa21.8■■□□□ 1.08
SUDS3-204ENST00000543473 SELENOSQ9BQE4 189 aa21.8■■□□□ 1.08
SUDS3-204ENST00000543473 CALML3P27482 149 aa21.79■■□□□ 1.08
SUDS3-204ENST00000543473 FBF1Q8TES7 1133 aa21.79■■□□□ 1.08
SUDS3-204ENST00000543473 ANGEL1Q9UNK9 670 aaKnown RBP21.79■■□□□ 1.08
SUDS3-204ENST00000543473 NLRP1Q9C000 1473 aa21.79■■□□□ 1.08
SUDS3-204ENST00000543473 TLDC2A0PJX2 215 aa21.79■■□□□ 1.08
SUDS3-204ENST00000543473 ARAP3Q8WWN8 1544 aa21.79■■□□□ 1.08
SUDS3-204ENST00000543473 MYSM1Q5VVJ2 828 aa21.79■■□□□ 1.08
SUDS3-204ENST00000543473 PDLIM2Q96JY6 352 aa21.79■■□□□ 1.08
SUDS3-204ENST00000543473 C8orf74Q6P047 294 aa21.79■■□□□ 1.08
SUDS3-204ENST00000543473 DIS3L2Q8IYB7 885 aaKnown RBP21.79■■□□□ 1.08
SUDS3-204ENST00000543473 TRMT44Q8IYL2 757 aaKnown RBP21.79■■□□□ 1.08
SUDS3-204ENST00000543473 PPP2R2CQ9Y2T4 447 aa21.78■■□□□ 1.08
SUDS3-204ENST00000543473 NDUFB9Q9Y6M9 179 aa21.78■■□□□ 1.08
SUDS3-204ENST00000543473 IRS4O14654 1257 aaPredicted RBP21.78■■□□□ 1.08
SUDS3-204ENST00000543473 POSTNQ15063 836 aa21.78■■□□□ 1.08
SUDS3-204ENST00000543473 SLC4A8Q2Y0W8 1093 aa21.78■■□□□ 1.08
SUDS3-204ENST00000543473 CRACR2BQ8N4Y2 399 aaPredicted RBP21.78■■□□□ 1.08
SUDS3-204ENST00000543473 STAP2Q9UGK3 403 aa21.78■■□□□ 1.08
SUDS3-204ENST00000543473 HPDP32754 393 aaPredicted RBP21.78■■□□□ 1.08
SUDS3-204ENST00000543473 SIRT2Q8IXJ6 389 aa21.78■■□□□ 1.08
SUDS3-204ENST00000543473 LMBR1Q8WVP7 490 aa21.78■■□□□ 1.08
SUDS3-204ENST00000543473 B4E1Z4 1266 aa21.78■■□□□ 1.08
SUDS3-204ENST00000543473 UNC5CLQ8IV45 518 aa21.78■■□□□ 1.08
SUDS3-204ENST00000543473 RASAL2Q9UJF2 1139 aa21.78■■□□□ 1.08
SUDS3-204ENST00000543473 KIF1BO60333 1816 aa21.77■■□□□ 1.08
SUDS3-204ENST00000543473 ZNF174Q15697 407 aa21.77■■□□□ 1.08
SUDS3-204ENST00000543473 LONRF3Q496Y0 759 aa21.77■■□□□ 1.08
SUDS3-204ENST00000543473 KRT40Q6A162 431 aa21.77■■□□□ 1.08
SUDS3-204ENST00000543473 HEATR3Q7Z4Q2 680 aa21.77■■□□□ 1.08
SUDS3-204ENST00000543473 SLF1Q9BQI6 1058 aa21.77■■□□□ 1.08
SUDS3-204ENST00000543473 DESI2Q9BSY9 194 aa21.77■■□□□ 1.08
SUDS3-204ENST00000543473 CCDC172P0C7W6 258 aa21.77■■□□□ 1.08
SUDS3-204ENST00000543473 CALM1P0DP23 149 aa21.77■■□□□ 1.08
SUDS3-204ENST00000543473 CALM2P0DP24 149 aa21.77■■□□□ 1.08
SUDS3-204ENST00000543473 CALM3P0DP25 149 aa21.77■■□□□ 1.08
SUDS3-204ENST00000543473 JAKMIP2Q96AA8 810 aa21.77■■□□□ 1.08
SUDS3-204ENST00000543473 ZNF496Q96IT1 587 aaPredicted RBP21.77■■□□□ 1.08
SUDS3-204ENST00000543473 CRNKL1Q9BZJ0 848 aaKnown RBP21.77■■□□□ 1.08
SUDS3-204ENST00000543473 GNAQP50148 359 aa21.77■■□□□ 1.08
SUDS3-204ENST00000543473 DTHD1Q6ZMT9 781 aa21.77■■□□□ 1.08
SUDS3-204ENST00000543473 TMEM87BQ96K49 555 aa21.77■■□□□ 1.08
SUDS3-204ENST00000543473 LSG1Q9H089 658 aaKnown RBP21.77■■□□□ 1.08
SUDS3-204ENST00000543473 STMN4Q9H169 189 aaPredicted RBP21.77■■□□□ 1.08
SUDS3-204ENST00000543473 PFKFB1P16118 471 aa21.77■■□□□ 1.07
SUDS3-204ENST00000543473 CDC25BP30305 580 aa21.77■■□□□ 1.07
SUDS3-204ENST00000543473 MAPK8IP1Q9UQF2 711 aa21.77■■□□□ 1.07
SUDS3-204ENST00000543473 RTL9Q8NET4 1388 aa21.76■■□□□ 1.07
SUDS3-204ENST00000543473 PNOCQ13519 176 aa21.76■■□□□ 1.07
SUDS3-204ENST00000543473 CCDC6Q16204 474 aa21.76■■□□□ 1.07
SUDS3-204ENST00000543473 SUCLG2Q96I99 432 aa21.76■■□□□ 1.07
SUDS3-204ENST00000543473 PRR36Q9H6K5 1346 aa21.76■■□□□ 1.07
SUDS3-204ENST00000543473 A0A1W2PRG0 241 aa21.76■■□□□ 1.07
SUDS3-204ENST00000543473 A1BGP04217 495 aa21.76■■□□□ 1.07
SUDS3-204ENST00000543473 ADCK5Q3MIX3 580 aa21.76■■□□□ 1.07
SUDS3-204ENST00000543473 IL17REQ8NFR9 667 aa21.76■■□□□ 1.07
SUDS3-204ENST00000543473 RSRC1Q96IZ7 334 aaKnown RBP21.76■■□□□ 1.07
SUDS3-204ENST00000543473 TET3O43151 1660 aa21.76■■□□□ 1.07
SUDS3-204ENST00000543473 A0A1B0GUA9 196 aa21.76■■□□□ 1.07
SUDS3-204ENST00000543473 ST5P78524 1137 aa21.76■■□□□ 1.07
SUDS3-204ENST00000543473 PPFIA1Q13136 1202 aa21.76■■□□□ 1.07
SUDS3-204ENST00000543473 NAA25Q14CX7 972 aa21.76■■□□□ 1.07
SUDS3-204ENST00000543473 PLIN2Q99541 437 aa21.76■■□□□ 1.07
SUDS3-204ENST00000543473 SHROOM2Q13796 1616 aa21.76■■□□□ 1.07
SUDS3-204ENST00000543473 A0A0D9SFI3 127 aa21.75■■□□□ 1.07
SUDS3-204ENST00000543473 HELBQ8NG08 1087 aaPredicted RBP21.75■■□□□ 1.07
SUDS3-204ENST00000543473 ZNF622Q969S3 477 aaKnown RBP eCLIP21.75■■□□□ 1.071e-6■■■■□ 22.6
SUDS3-204ENST00000543473 ZKSCAN3Q9BRR0 538 aa21.75■■□□□ 1.07
SUDS3-204ENST00000543473 GOLGA5Q8TBA6 731 aa21.75■■□□□ 1.07
SUDS3-204ENST00000543473 GDAP1L1Q96MZ0 367 aa21.75■■□□□ 1.07
SUDS3-204ENST00000543473 RTCBQ9Y3I0 505 aaKnown RBP21.75■■□□□ 1.07
SUDS3-204ENST00000543473 KRT13P13646 458 aa21.75■■□□□ 1.07
SUDS3-204ENST00000543473 GNAT2P19087 354 aa21.75■■□□□ 1.07
SUDS3-204ENST00000543473 SND1Q7KZF4 910 aaKnown RBP eCLIP21.75■■□□□ 1.07
SUDS3-204ENST00000543473 EDC3Q96F86 508 aaKnown RBP21.75■■□□□ 1.07
SUDS3-204ENST00000543473 FAM89AQ96GI7 184 aa21.75■■□□□ 1.07
SUDS3-204ENST00000543473 PPP1R13BQ96KQ4 1090 aa21.75■■□□□ 1.07
SUDS3-204ENST00000543473 CDCA7Q9BWT1 371 aaPredicted RBP21.75■■□□□ 1.07
SUDS3-204ENST00000543473 PLVAPQ9BX97 442 aa21.75■■□□□ 1.07
SUDS3-204ENST00000543473 SAMD15Q9P1V8 674 aa21.75■■□□□ 1.07
SUDS3-204ENST00000543473 NPHP4O75161 1426 aaPredicted RBP21.75■■□□□ 1.07
SUDS3-204ENST00000543473 EIF4A1P60842 406 aaKnown RBP21.75■■□□□ 1.07
SUDS3-204ENST00000543473 SMIM23A6NLE4 172 aa21.74■■□□□ 1.07
SUDS3-204ENST00000543473 DEXIO95424 95 aa21.74■■□□□ 1.07
SUDS3-204ENST00000543473 PLBD2Q8NHP8 589 aa21.74■■□□□ 1.07
SUDS3-204ENST00000543473 NOC4LQ9BVI4 516 aaKnown RBP21.74■■□□□ 1.07
SUDS3-204ENST00000543473 ARHGAP25P42331 645 aa21.74■■□□□ 1.07
SUDS3-204ENST00000543473 SLF2Q8IX21 1173 aa21.74■■□□□ 1.07
SUDS3-204ENST00000543473 METTL22Q9BUU2 404 aaPredicted RBP21.74■■□□□ 1.07
SUDS3-204ENST00000543473 PCDHA7Q9UN72 937 aa21.74■■□□□ 1.07
SUDS3-204ENST00000543473 LDHCP07864 332 aa21.74■■□□□ 1.07
SUDS3-204ENST00000543473 UBLCP1Q8WVY7 318 aaPredicted RBP21.74■■□□□ 1.07
SUDS3-204ENST00000543473 PAIP2Q9BPZ3 127 aaKnown RBP21.74■■□□□ 1.07
SUDS3-204ENST00000543473 TAB2Q9NYJ8 693 aa21.74■■□□□ 1.07
SUDS3-204ENST00000543473 RBM6P78332 1123 aaKnown RBP21.73■■□□□ 1.07
SUDS3-204ENST00000543473 PHKBQ93100 1093 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms