RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 RPAP2Q8IXW5 612 aaPredicted RBP22.83■■□□□ 1.25
TMED3-204ENST00000543455 DDTLA6NHG4 134 aaPredicted RBP22.82■■□□□ 1.24
TMED3-204ENST00000543455 ALDH1A1P00352 501 aa22.82■■□□□ 1.24
TMED3-204ENST00000543455 CENPBP07199 599 aaPredicted RBP22.82■■□□□ 1.24
TMED3-204ENST00000543455 PDE3AQ14432 1141 aa22.82■■□□□ 1.24
TMED3-204ENST00000543455 PIH1D3Q9NQM4 214 aaKnown RBP22.82■■□□□ 1.24
TMED3-204ENST00000543455 RHPN1Q8TCX5 695 aa22.81■■□□□ 1.24
TMED3-204ENST00000543455 IL1RAPL2Q9NP60 686 aa22.81■■□□□ 1.24
TMED3-204ENST00000543455 LRP2BPQ9P2M1 347 aa22.81■■□□□ 1.24
TMED3-204ENST00000543455 PHF20L1A8MW92 1017 aa22.8■■□□□ 1.24
TMED3-204ENST00000543455 GSTO1P78417 241 aa22.8■■□□□ 1.24
TMED3-204ENST00000543455 PICALMQ13492 652 aa22.8■■□□□ 1.24
TMED3-204ENST00000543455 CTU1Q7Z7A3 348 aaKnown RBP22.8■■□□□ 1.24
TMED3-204ENST00000543455 ADGRA1Q86SQ6 560 aa22.8■■□□□ 1.24
TMED3-204ENST00000543455 ERO1BQ86YB8 467 aa22.8■■□□□ 1.24
TMED3-204ENST00000543455 ERC1Q8IUD2 1116 aa22.8■■□□□ 1.24
TMED3-204ENST00000543455 NDUFB9Q9Y6M9 179 aa22.8■■□□□ 1.24
TMED3-204ENST00000543455 IRF6O14896 467 aa22.79■■□□□ 1.24
TMED3-204ENST00000543455 LDHCP07864 332 aa22.79■■□□□ 1.24
TMED3-204ENST00000543455 MAP3K10Q02779 954 aa22.79■■□□□ 1.24
TMED3-204ENST00000543455 AACSQ86V21 672 aa22.79■■□□□ 1.24
TMED3-204ENST00000543455 FOCADQ5VW36 1801 aa22.79■■□□□ 1.24
TMED3-204ENST00000543455 CCL15-CCL14A0A0B4J2E2 113 aa22.79■■□□□ 1.24
TMED3-204ENST00000543455 GTF2A2P52657 109 aa22.79■■□□□ 1.24
TMED3-204ENST00000543455 CRHR2Q13324 411 aa22.79■■□□□ 1.24
TMED3-204ENST00000543455 PPIL2Q13356 520 aa22.79■■□□□ 1.24
TMED3-204ENST00000543455 CCL15Q16663 113 aa22.79■■□□□ 1.24
TMED3-204ENST00000543455 NOL9Q5SY16 702 aaKnown RBP22.79■■□□□ 1.24
TMED3-204ENST00000543455 SIPA1L1O43166 1804 aa22.79■■□□□ 1.24
TMED3-204ENST00000543455 FKTNO75072 461 aa22.78■■□□□ 1.24
TMED3-204ENST00000543455 NPM3O75607 178 aaKnown RBP22.78■■□□□ 1.24
TMED3-204ENST00000543455 FAM43AQ8N2R8 423 aa22.78■■□□□ 1.24
TMED3-204ENST00000543455 HSP90AB4PQ58FF6 505 aa22.77■■□□□ 1.24
TMED3-204ENST00000543455 NAA16Q6N069 864 aaPredicted RBP22.77■■□□□ 1.24
TMED3-204ENST00000543455 SH3RF3Q8TEJ3 882 aaPredicted RBP22.77■■□□□ 1.24
TMED3-204ENST00000543455 ANTXR1Q9H6X2 564 aa22.77■■□□□ 1.24
TMED3-204ENST00000543455 COL2A1P02458 1487 aaPredicted RBP22.77■■□□□ 1.24
TMED3-204ENST00000543455 PHIPQ8WWQ0 1821 aa22.77■■□□□ 1.24
TMED3-204ENST00000543455 CCDC85CA6NKD9 419 aa22.76■■□□□ 1.23
TMED3-204ENST00000543455 APBB1O00213 710 aa22.76■■□□□ 1.23
TMED3-204ENST00000543455 MAP4K4O95819 1239 aaPredicted RBP22.76■■□□□ 1.23
TMED3-204ENST00000543455 CAP1Q01518 475 aa22.76■■□□□ 1.23
TMED3-204ENST00000543455 PPATQ06203 517 aa22.76■■□□□ 1.23
TMED3-204ENST00000543455 ZSCAN29Q8IWY8 852 aaPredicted RBP22.76■■□□□ 1.23
TMED3-204ENST00000543455 DOCK1Q14185 1865 aa22.76■■□□□ 1.23
TMED3-204ENST00000543455 HMMRO75330 724 aa22.75■■□□□ 1.23
TMED3-204ENST00000543455 AATFQ9NY61 560 aaKnown RBP eCLIP22.75■■□□□ 1.23
TMED3-204ENST00000543455 BTBD19C9JJ37 291 aa22.74■■□□□ 1.23
TMED3-204ENST00000543455 PPP4CP60510 307 aa22.74■■□□□ 1.23
TMED3-204ENST00000543455 MOGSQ13724 837 aa22.74■■□□□ 1.23
TMED3-204ENST00000543455 OTUD7BQ6GQQ9 843 aa22.74■■□□□ 1.23
TMED3-204ENST00000543455 TEX11Q8IYF3 940 aa22.74■■□□□ 1.23
TMED3-204ENST00000543455 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.74■■□□□ 1.23
TMED3-204ENST00000543455 KIF1BPQ96EK5 621 aa22.74■■□□□ 1.23
TMED3-204ENST00000543455 OSBPL5Q9H0X9 879 aaPredicted RBP22.74■■□□□ 1.23
TMED3-204ENST00000543455 KCNH4Q9UQ05 1017 aa22.74■■□□□ 1.23
TMED3-204ENST00000543455 PTPRFP10586 1907 aa22.74■■□□□ 1.23
TMED3-204ENST00000543455 CETPP11597 493 aa22.73■■□□□ 1.23
TMED3-204ENST00000543455 SNAPC2Q13487 334 aa22.73■■□□□ 1.23
TMED3-204ENST00000543455 CHMP4BQ9H444 224 aaKnown RBP22.73■■□□□ 1.23
TMED3-204ENST00000543455 HTTP42858 3142 aa22.73■■□□□ 1.23
TMED3-204ENST00000543455 FAM196BA6NMK8 535 aa22.73■■□□□ 1.23
TMED3-204ENST00000543455 IGSF3O75054 1194 aa22.72■■□□□ 1.23
TMED3-204ENST00000543455 RAB11FIP3O75154 756 aa22.72■■□□□ 1.23
TMED3-204ENST00000543455 SCYL3Q8IZE3 742 aa22.72■■□□□ 1.23
TMED3-204ENST00000543455 CLASRPQ8N2M8 674 aaKnown RBP22.72■■□□□ 1.23
TMED3-204ENST00000543455 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.72■■□□□ 1.23
TMED3-204ENST00000543455 TBC1D12O60347 775 aa22.71■■□□□ 1.23
TMED3-204ENST00000543455 IDH1O75874 414 aaKnown RBP22.71■■□□□ 1.23
TMED3-204ENST00000543455 DYNLL1P63167 89 aaKnown RBP22.71■■□□□ 1.23
TMED3-204ENST00000543455 TAF1CQ15572 869 aaPredicted RBP22.71■■□□□ 1.23
TMED3-204ENST00000543455 ATAD5Q96QE3 1844 aa22.71■■□□□ 1.23
TMED3-204ENST00000543455 ZSWIM8A7E2V4 1837 aa22.7■■□□□ 1.22
TMED3-204ENST00000543455 PTPRAP18433 802 aa22.7■■□□□ 1.22
TMED3-204ENST00000543455 CYP7A1P22680 504 aa22.7■■□□□ 1.22
TMED3-204ENST00000543455 RRP1BQ14684 758 aaKnown RBP22.7■■□□□ 1.22
TMED3-204ENST00000543455 HPS5Q9UPZ3 1129 aa22.7■■□□□ 1.22
TMED3-204ENST00000543455 FLT1P17948 1338 aa22.69■■□□□ 1.22
TMED3-204ENST00000543455 BAG3O95817 575 aa22.69■■□□□ 1.22
TMED3-204ENST00000543455 PKN2Q16513 984 aaKnown RBP22.69■■□□□ 1.22
TMED3-204ENST00000543455 CD99L2Q8TCZ2 262 aa22.69■■□□□ 1.22
TMED3-204ENST00000543455 TGFBRAP1Q8WUH2 860 aa22.69■■□□□ 1.22
TMED3-204ENST00000543455 CTNND1O60716 968 aaKnown RBP22.68■■□□□ 1.22
TMED3-204ENST00000543455 OTOP1Q7RTM1 612 aa22.68■■□□□ 1.22
TMED3-204ENST00000543455 CCDC84Q86UT8 332 aaPredicted RBP22.68■■□□□ 1.22
TMED3-204ENST00000543455 MAPKAPK5Q8IW41 473 aa22.68■■□□□ 1.22
TMED3-204ENST00000543455 MAGEB6Q8N7X4 407 aa22.68■■□□□ 1.22
TMED3-204ENST00000543455 NOL10Q9BSC4 688 aaKnown RBP22.68■■□□□ 1.22
TMED3-204ENST00000543455 ZCCHC17Q9NP64 241 aaKnown RBP22.68■■□□□ 1.22
TMED3-204ENST00000543455 IFIT2P09913 472 aaKnown RBP22.67■■□□□ 1.22
TMED3-204ENST00000543455 PLCG2P16885 1265 aa22.67■■□□□ 1.22
TMED3-204ENST00000543455 MIGA1Q8NAN2 632 aa22.67■■□□□ 1.22
TMED3-204ENST00000543455 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.67■■□□□ 1.22
TMED3-204ENST00000543455 DNAJC18Q9H819 358 aa22.67■■□□□ 1.22
TMED3-204ENST00000543455 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.67■■□□□ 1.22
TMED3-204ENST00000543455 ZFYVE28Q9HCC9 887 aa22.67■■□□□ 1.22
TMED3-204ENST00000543455 AFG3L2Q9Y4W6 797 aa22.67■■□□□ 1.22
TMED3-204ENST00000543455 ZHX2Q9Y6X8 837 aa22.67■■□□□ 1.22
TMED3-204ENST00000543455 MYH1P12882 1939 aa22.67■■□□□ 1.22
TMED3-204ENST00000543455 SP3Q02447 781 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 213.7 ms