RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 PPIL2Q13356 520 aa21.37■■□□□ 1.01
LTBR-210ENST00000542830 ZSCAN29Q8IWY8 852 aaPredicted RBP21.37■■□□□ 1.01
LTBR-210ENST00000542830 ZFPM1Q8IX07 1006 aa21.37■■□□□ 1.01
LTBR-210ENST00000542830 NOL10Q9BSC4 688 aaKnown RBP21.37■■□□□ 1.01
LTBR-210ENST00000542830 CCDC8Q9H0W5 538 aaPredicted RBP21.37■■□□□ 1.01
LTBR-210ENST00000542830 SNRKQ9NRH2 765 aa21.37■■□□□ 1.01
LTBR-210ENST00000542830 CCL15-CCL14A0A0B4J2E2 113 aa21.36■■□□□ 1.01
LTBR-210ENST00000542830 INPP5BP32019 993 aa21.36■■□□□ 1.01
LTBR-210ENST00000542830 PPATQ06203 517 aa21.36■■□□□ 1.01
LTBR-210ENST00000542830 PICALMQ13492 652 aa21.36■■□□□ 1.01
LTBR-210ENST00000542830 CCL15Q16663 113 aa21.36■■□□□ 1.01
LTBR-210ENST00000542830 NAA16Q6N069 864 aaPredicted RBP21.36■■□□□ 1.01
LTBR-210ENST00000542830 PTPN18Q99952 460 aa21.36■■□□□ 1.01
LTBR-210ENST00000542830 R3HDMLQ9H3Y0 253 aa21.36■■□□□ 1.01
LTBR-210ENST00000542830 CYP2E1P05181 493 aaPredicted RBP21.35■■□□□ 1.01
LTBR-210ENST00000542830 CETPP11597 493 aa21.35■■□□□ 1.01
LTBR-210ENST00000542830 SNAPC2Q13487 334 aa21.35■■□□□ 1.01
LTBR-210ENST00000542830 NOL9Q5SY16 702 aaKnown RBP21.35■■□□□ 1.01
LTBR-210ENST00000542830 AACSQ86V21 672 aa21.35■■□□□ 1.01
LTBR-210ENST00000542830 RHPN1Q8TCX5 695 aa21.35■■□□□ 1.01
LTBR-210ENST00000542830 BRI3BPQ8WY22 251 aa21.35■■□□□ 1.01
LTBR-210ENST00000542830 DDX4Q9NQI0 724 aaKnown RBP21.35■■□□□ 1.01
LTBR-210ENST00000542830 TLR7Q9NYK1 1049 aaKnown RBP21.35■■□□□ 1.01
LTBR-210ENST00000542830 ATRNL1Q5VV63 1379 aa21.35■■□□□ 1.01
LTBR-210ENST00000542830 IRF6O14896 467 aa21.34■■□□□ 1.01
LTBR-210ENST00000542830 BAG3O95817 575 aa21.34■■□□□ 1.01
LTBR-210ENST00000542830 PLCG2P16885 1265 aa21.34■■□□□ 1.01
LTBR-210ENST00000542830 ZAP70P43403 619 aa21.34■■□□□ 1.01
LTBR-210ENST00000542830 KIF1BPQ96EK5 621 aa21.34■■□□□ 1.01
LTBR-210ENST00000542830 MAP3K10Q02779 954 aa21.33■■□□□ 1.01
LTBR-210ENST00000542830 CRHR2Q13324 411 aa21.33■■□□□ 1.01
LTBR-210ENST00000542830 SH3BP5LQ7L8J4 393 aa21.33■■□□□ 1.01
LTBR-210ENST00000542830 CLASRPQ8N2M8 674 aaKnown RBP21.33■■□□□ 1.01
LTBR-210ENST00000542830 ZCCHC17Q9NP64 241 aaKnown RBP21.33■■□□□ 1.01
LTBR-210ENST00000542830 DOCK2Q92608 1830 aa21.32■■□□□ 1
LTBR-210ENST00000542830 DDTLA6NHG4 134 aaPredicted RBP21.32■■□□□ 1
LTBR-210ENST00000542830 RAB11FIP3O75154 756 aa21.32■■□□□ 1
LTBR-210ENST00000542830 SIRT2Q8IXJ6 389 aa21.32■■□□□ 1
LTBR-210ENST00000542830 TEX11Q8IYF3 940 aa21.32■■□□□ 1
LTBR-210ENST00000542830 ZFYVE28Q9HCC9 887 aa21.32■■□□□ 1
LTBR-210ENST00000542830 MAST2Q6P0Q8 1798 aa21.32■■□□□ 1
LTBR-210ENST00000542830 COL2A1P02458 1487 aaPredicted RBP21.32■■□□□ 1
LTBR-210ENST00000542830 PHF20L1A8MW92 1017 aa21.31■■□□□ 1
LTBR-210ENST00000542830 PPP4CP60510 307 aa21.31■■□□□ 1
LTBR-210ENST00000542830 TAF1CQ15572 869 aaPredicted RBP21.31■■□□□ 1
LTBR-210ENST00000542830 TMED8Q6PL24 325 aaPredicted RBP21.31■■□□□ 1
LTBR-210ENST00000542830 OSBPL5Q9H0X9 879 aaPredicted RBP21.31■■□□□ 1
LTBR-210ENST00000542830 IL1RAPL2Q9NP60 686 aa21.31■■□□□ 1
LTBR-210ENST00000542830 TBC1D12O60347 775 aa21.3■■□□□ 1
LTBR-210ENST00000542830 C20orf194Q5TEA3 1177 aa21.3■■□□□ 1
LTBR-210ENST00000542830 SCYL3Q8IZE3 742 aa21.3■■□□□ 1
LTBR-210ENST00000542830 FAM43AQ8N2R8 423 aa21.3■■□□□ 1
LTBR-210ENST00000542830 ERO1AQ96HE7 468 aa21.3■■□□□ 1
LTBR-210ENST00000542830 PIH1D3Q9NQM4 214 aaKnown RBP21.3■■□□□ 1
LTBR-210ENST00000542830 PICK1Q9NRD5 415 aa21.3■■□□□ 1
LTBR-210ENST00000542830 AATFQ9NY61 560 aaKnown RBP eCLIP21.3■■□□□ 1
LTBR-210ENST00000542830 KCNH4Q9UQ05 1017 aa21.3■■□□□ 1
LTBR-210ENST00000542830 FBXO46Q6PJ61 603 aaPredicted RBP21.29■■□□□ 1
LTBR-210ENST00000542830 SH3RF3Q8TEJ3 882 aaPredicted RBP21.29■■□□□ 1
LTBR-210ENST00000542830 BTBD19C9JJ37 291 aa21.28■■□□□ 1
LTBR-210ENST00000542830 APBB1O00213 710 aa21.28■■□□□ 1
LTBR-210ENST00000542830 CXCL11O14625 94 aa21.28■■□□□ 1
LTBR-210ENST00000542830 CTNND1O60716 968 aaKnown RBP21.28■■□□□ 1
LTBR-210ENST00000542830 IDH1O75874 414 aaKnown RBP21.28■■□□□ 1
LTBR-210ENST00000542830 IFIT2P09913 472 aaKnown RBP21.28■■□□□ 1
LTBR-210ENST00000542830 SP3Q02447 781 aa21.28■■□□□ 1
LTBR-210ENST00000542830 CERS3Q8IU89 383 aa21.28■■□□□ 1
LTBR-210ENST00000542830 DHX36Q9H2U1 1008 aaKnown RBP21.28■■□□□ 1
LTBR-210ENST00000542830 CYP7A1P22680 504 aa21.27■■□□□ 1
LTBR-210ENST00000542830 MAP3K12Q12852 859 aa21.27■■□□□ 1
LTBR-210ENST00000542830 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.27■■□□□ 1
LTBR-210ENST00000542830 HPS5Q9UPZ3 1129 aa21.27■■□□□ 1
LTBR-210ENST00000542830 PTPRAP18433 802 aa21.26■□□□□ 0.99
LTBR-210ENST00000542830 TTF1Q15361 905 aaPredicted RBP21.26■□□□□ 0.99
LTBR-210ENST00000542830 ANKRD23Q86SG2 305 aa21.26■□□□□ 0.99
LTBR-210ENST00000542830 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.26■□□□□ 0.99
LTBR-210ENST00000542830 TRIM17Q9Y577 477 aa21.26■□□□□ 0.99
LTBR-210ENST00000542830 ARHGEF6Q15052 776 aa21.25■□□□□ 0.99
LTBR-210ENST00000542830 OTOP1Q7RTM1 612 aa21.25■□□□□ 0.99
LTBR-210ENST00000542830 ADGRA1Q86SQ6 560 aa21.25■□□□□ 0.99
LTBR-210ENST00000542830 TGFBRAP1Q8WUH2 860 aa21.25■□□□□ 0.99
LTBR-210ENST00000542830 PI4KBQ9UBF8 816 aa21.25■□□□□ 0.99
LTBR-210ENST00000542830 HERC5Q9UII4 1024 aaKnown RBP21.25■□□□□ 0.99
LTBR-210ENST00000542830 ZHX2Q9Y6X8 837 aa21.25■□□□□ 0.99
LTBR-210ENST00000542830 TLR2O60603 784 aa21.24■□□□□ 0.99
LTBR-210ENST00000542830 RGS19P49795 217 aa21.24■□□□□ 0.99
LTBR-210ENST00000542830 MAGEB6Q8N7X4 407 aa21.24■□□□□ 0.99
LTBR-210ENST00000542830 CD99L2Q8TCZ2 262 aa21.24■□□□□ 0.99
LTBR-210ENST00000542830 ANTXR1Q9H6X2 564 aa21.24■□□□□ 0.99
LTBR-210ENST00000542830 NDUFB9Q9Y6M9 179 aa21.24■□□□□ 0.99
LTBR-210ENST00000542830 FLT1P17948 1338 aa21.24■□□□□ 0.99
LTBR-210ENST00000542830 MYO5AQ9Y4I1 1855 aaKnown RBP21.24■□□□□ 0.99
LTBR-210ENST00000542830 FASTKD5Q7L8L6 764 aaKnown RBP21.23■□□□□ 0.99
LTBR-210ENST00000542830 EFCC1Q9HA90 598 aa21.23■□□□□ 0.99
LTBR-210ENST00000542830 AFG3L2Q9Y4W6 797 aa21.23■□□□□ 0.99
LTBR-210ENST00000542830 SLURP2P0DP57 97 aa21.22■□□□□ 0.99
LTBR-210ENST00000542830 MAPKAPK5Q8IW41 473 aa21.22■□□□□ 0.99
LTBR-210ENST00000542830 TBC1D2Q9BYX2 928 aa21.22■□□□□ 0.99
LTBR-210ENST00000542830 LRRCC1Q9C099 1032 aa21.22■□□□□ 0.99
LTBR-210ENST00000542830 DOCK1Q14185 1865 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms