RNA–Protein interactions for RNA: ENST00000542687.1

MRPL40P1-201, Transcript of mitochondrial ribosomal protein L40 pseudogene 1, humanhuman

BASIC

Gene MRPL40P1, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40P1-201ENST00000542687 ENTPD3O75355 529 aa9.53□□□□□ -0.88
MRPL40P1-201ENST00000542687 NPM3O75607 178 aaKnown RBP9.53□□□□□ -0.88
MRPL40P1-201ENST00000542687 TNNI2P48788 182 aa9.53□□□□□ -0.88
MRPL40P1-201ENST00000542687 CACNB3P54284 484 aa9.53□□□□□ -0.88
MRPL40P1-201ENST00000542687 PPARAQ07869 468 aa9.53□□□□□ -0.88
MRPL40P1-201ENST00000542687 NFIAQ12857 509 aa9.53□□□□□ -0.88
MRPL40P1-201ENST00000542687 TRDNQ13061 729 aa9.53□□□□□ -0.88
MRPL40P1-201ENST00000542687 NBPF9Q3BBW0 867 aa9.53□□□□□ -0.88
MRPL40P1-201ENST00000542687 SPDYE2Q495Y8 402 aa9.53□□□□□ -0.88
MRPL40P1-201ENST00000542687 FKBP1CQ5VVH2 108 aa9.53□□□□□ -0.88
MRPL40P1-201ENST00000542687 TTC6Q86TZ1 520 aa9.53□□□□□ -0.88
MRPL40P1-201ENST00000542687 ZNF526Q8TF50 670 aaPredicted RBP9.53□□□□□ -0.88
MRPL40P1-201ENST00000542687 L3MBTL3Q96JM7 780 aaPredicted RBP9.53□□□□□ -0.88
MRPL40P1-201ENST00000542687 JAKMIP1Q96N16 626 aaKnown RBP9.53□□□□□ -0.88
MRPL40P1-201ENST00000542687 OSBPL5Q9H0X9 879 aaPredicted RBP9.53□□□□□ -0.88
MRPL40P1-201ENST00000542687 RNF41Q9H4P4 317 aaPredicted RBP9.53□□□□□ -0.88
MRPL40P1-201ENST00000542687 VEZTQ9HBM0 779 aa9.53□□□□□ -0.88
MRPL40P1-201ENST00000542687 ADARB2Q9NS39 739 aaKnown RBP9.53□□□□□ -0.88
MRPL40P1-201ENST00000542687 MKRN1Q9UHC7 482 aaKnown RBP9.53□□□□□ -0.88
MRPL40P1-201ENST00000542687 SAP30BPQ9UHR5 308 aaKnown RBP9.53□□□□□ -0.88
MRPL40P1-201ENST00000542687 ANAPC4Q9UJX5 808 aa9.53□□□□□ -0.88
MRPL40P1-201ENST00000542687 FLT1P17948 1338 aa9.53□□□□□ -0.88
MRPL40P1-201ENST00000542687 IQCA1LA6NCM1 817 aa9.52□□□□□ -0.89
MRPL40P1-201ENST00000542687 TCP10L2B9ZVM9 353 aa9.52□□□□□ -0.89
MRPL40P1-201ENST00000542687 E7EWF7 191 aa9.52□□□□□ -0.89
MRPL40P1-201ENST00000542687 EGFRP00533 1210 aa9.52□□□□□ -0.89
MRPL40P1-201ENST00000542687 HLA-DOAP06340 250 aa9.52□□□□□ -0.89
MRPL40P1-201ENST00000542687 CTDSPL2Q05D32 466 aa9.52□□□□□ -0.89
MRPL40P1-201ENST00000542687 TCP10Q12799 353 aa9.52□□□□□ -0.89
MRPL40P1-201ENST00000542687 RABEP1Q15276 862 aa9.52□□□□□ -0.89
MRPL40P1-201ENST00000542687 C12orf60Q5U649 245 aa9.52□□□□□ -0.89
MRPL40P1-201ENST00000542687 MFSD6Q6ZSS7 791 aa9.52□□□□□ -0.89
MRPL40P1-201ENST00000542687 ZSCAN29Q8IWY8 852 aaPredicted RBP9.52□□□□□ -0.89
MRPL40P1-201ENST00000542687 IL27Q8NEV9 243 aa9.52□□□□□ -0.89
MRPL40P1-201ENST00000542687 IL17RAQ96F46 866 aa9.52□□□□□ -0.89
MRPL40P1-201ENST00000542687 NEK1Q96PY6 1258 aa9.52□□□□□ -0.89
MRPL40P1-201ENST00000542687 DHX36Q9H2U1 1008 aaKnown RBP9.52□□□□□ -0.89
MRPL40P1-201ENST00000542687 DDX4Q9NQI0 724 aaKnown RBP9.52□□□□□ -0.89
MRPL40P1-201ENST00000542687 FAM198AQ9UFP1 575 aa9.52□□□□□ -0.89
MRPL40P1-201ENST00000542687 HACL1Q9UJ83 578 aa9.52□□□□□ -0.89
MRPL40P1-201ENST00000542687 RBM19Q9Y4C8 960 aaKnown RBP9.52□□□□□ -0.89
MRPL40P1-201ENST00000542687 CYP2D7A0A087X1C5 515 aa9.51□□□□□ -0.89
MRPL40P1-201ENST00000542687 HMGB1P09429 215 aaKnown RBP9.51□□□□□ -0.89
MRPL40P1-201ENST00000542687 CYP2D6P10635 497 aa9.51□□□□□ -0.89
MRPL40P1-201ENST00000542687 PDE4BQ07343 736 aa9.51□□□□□ -0.89
MRPL40P1-201ENST00000542687 TNFAIP1Q13829 316 aa9.51□□□□□ -0.89
MRPL40P1-201ENST00000542687 ADCK5Q3MIX3 580 aa9.51□□□□□ -0.89
MRPL40P1-201ENST00000542687 AKNAD1Q5T1N1 836 aa9.51□□□□□ -0.89
MRPL40P1-201ENST00000542687 USP50Q70EL3 339 aaPredicted RBP9.51□□□□□ -0.89
MRPL40P1-201ENST00000542687 RALYLQ86SE5 291 aaKnown RBP9.51□□□□□ -0.89
MRPL40P1-201ENST00000542687 FAM83AQ86UY5 434 aa9.51□□□□□ -0.89
MRPL40P1-201ENST00000542687 ZFPM1Q8IX07 1006 aa9.51□□□□□ -0.89
MRPL40P1-201ENST00000542687 NCOA7Q8NI08 942 aa9.51□□□□□ -0.89
MRPL40P1-201ENST00000542687 FAM151AQ8WW52 585 aa9.51□□□□□ -0.89
MRPL40P1-201ENST00000542687 KIF2CQ99661 725 aa9.51□□□□□ -0.89
MRPL40P1-201ENST00000542687 TM6SF1Q9BZW5 370 aa9.51□□□□□ -0.89
MRPL40P1-201ENST00000542687 KRT23Q9C075 422 aa9.51□□□□□ -0.89
MRPL40P1-201ENST00000542687 CNNM2Q9H8M5 875 aa9.51□□□□□ -0.89
MRPL40P1-201ENST00000542687 ZNF287Q9HBT7 754 aa9.51□□□□□ -0.89
MRPL40P1-201ENST00000542687 TOMM22Q9NS69 142 aa9.51□□□□□ -0.89
MRPL40P1-201ENST00000542687 CYP46A1Q9Y6A2 500 aa9.51□□□□□ -0.89
MRPL40P1-201ENST00000542687 ST18O60284 1047 aa9.5□□□□□ -0.89
MRPL40P1-201ENST00000542687 PCP11498 1178 aaKnown RBP9.5□□□□□ -0.89
MRPL40P1-201ENST00000542687 CASTP20810 708 aaKnown RBP9.5□□□□□ -0.89
MRPL40P1-201ENST00000542687 EPHX2P34913 555 aa9.5□□□□□ -0.89
MRPL40P1-201ENST00000542687 ANP32AP39687 249 aaKnown RBP9.5□□□□□ -0.89
MRPL40P1-201ENST00000542687 PLCD1P51178 756 aa9.5□□□□□ -0.89
MRPL40P1-201ENST00000542687 NEK4P51957 841 aa9.5□□□□□ -0.89
MRPL40P1-201ENST00000542687 HIRAP54198 1017 aaPredicted RBP9.5□□□□□ -0.89
MRPL40P1-201ENST00000542687 SLC4A8Q2Y0W8 1093 aa9.5□□□□□ -0.89
MRPL40P1-201ENST00000542687 RRP12Q5JTH9 1297 aaKnown RBP9.5□□□□□ -0.89
MRPL40P1-201ENST00000542687 BLOC1S2Q6QNY1 142 aa9.5□□□□□ -0.89
MRPL40P1-201ENST00000542687 RUFY3Q7L099 469 aa9.5□□□□□ -0.89
MRPL40P1-201ENST00000542687 TBC1D10CQ8IV04 446 aa9.5□□□□□ -0.89
MRPL40P1-201ENST00000542687 FOXP4Q8IVH2 680 aaPredicted RBP9.5□□□□□ -0.89
MRPL40P1-201ENST00000542687 STK11IPQ8N1F8 1099 aa9.5□□□□□ -0.89
MRPL40P1-201ENST00000542687 CRACR2BQ8N4Y2 399 aaPredicted RBP9.5□□□□□ -0.89
MRPL40P1-201ENST00000542687 TRPM4Q8TD43 1214 aa9.5□□□□□ -0.89
MRPL40P1-201ENST00000542687 STAG1Q8WVM7 1258 aa9.5□□□□□ -0.89
MRPL40P1-201ENST00000542687 TRIM34Q9BYJ4 488 aa9.5□□□□□ -0.89
MRPL40P1-201ENST00000542687 UPF3BQ9BZI7 483 aaKnown RBP9.5□□□□□ -0.89
MRPL40P1-201ENST00000542687 MKNK2Q9HBH9 465 aa9.5□□□□□ -0.89
MRPL40P1-201ENST00000542687 ZSWIM6Q9HCJ5 1215 aa9.5□□□□□ -0.89
MRPL40P1-201ENST00000542687 PI4KBQ9UBF8 816 aa9.5□□□□□ -0.89
MRPL40P1-201ENST00000542687 TAF6LQ9Y6J9 622 aa9.5□□□□□ -0.89
MRPL40P1-201ENST00000542687 FGRP09769 529 aa9.49□□□□□ -0.89
MRPL40P1-201ENST00000542687 MCM5P33992 734 aa9.49□□□□□ -0.89
MRPL40P1-201ENST00000542687 NT5C2P49902 561 aa9.49□□□□□ -0.89
MRPL40P1-201ENST00000542687 FGD1P98174 961 aa9.49□□□□□ -0.89
MRPL40P1-201ENST00000542687 RASA3Q14644 834 aa9.49□□□□□ -0.89
MRPL40P1-201ENST00000542687 ANGEL2Q5VTE6 544 aaKnown RBP9.49□□□□□ -0.89
MRPL40P1-201ENST00000542687 STOX1Q6ZVD7 989 aa9.49□□□□□ -0.89
MRPL40P1-201ENST00000542687 DHX32Q7L7V1 743 aaKnown RBP9.49□□□□□ -0.89
MRPL40P1-201ENST00000542687 PNMA8AQ86V59 439 aaPredicted RBP9.49□□□□□ -0.89
MRPL40P1-201ENST00000542687 APOBEC3FQ8IUX4 373 aaKnown RBP9.49□□□□□ -0.89
MRPL40P1-201ENST00000542687 ZNF444Q8N0Y2 327 aaPredicted RBP9.49□□□□□ -0.89
MRPL40P1-201ENST00000542687 ESR2Q92731 530 aa9.49□□□□□ -0.89
MRPL40P1-201ENST00000542687 DCPSQ96C86 337 aaKnown RBP9.49□□□□□ -0.89
MRPL40P1-201ENST00000542687 DYNLL2Q96FJ2 89 aa9.49□□□□□ -0.89
MRPL40P1-201ENST00000542687 NBPF3Q9H094 633 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms