RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 GRIN3AQ8TCU5 1115 aa8.78□□□□□ -1
XRCC4-206ENST00000542685 CEP44Q9C0F1 390 aa8.78□□□□□ -1
XRCC4-206ENST00000542685 ZC3H7BQ9UGR2 993 aaKnown RBP8.78□□□□□ -1
XRCC4-206ENST00000542685 COL17A1Q9UMD9 1497 aaPredicted RBP8.77□□□□□ -1
XRCC4-206ENST00000542685 GIPC1O14908 333 aa8.77□□□□□ -1.01
XRCC4-206ENST00000542685 LDHBP07195 334 aaKnown RBP8.77□□□□□ -1.01
XRCC4-206ENST00000542685 ZNF252P-AS1Q0IIN9 211 aa8.77□□□□□ -1.01
XRCC4-206ENST00000542685 SSU72Q9NP77 194 aaKnown RBP8.77□□□□□ -1.01
XRCC4-206ENST00000542685 BSDC1Q9NW68 430 aaPredicted RBP8.77□□□□□ -1.01
XRCC4-206ENST00000542685 PPM1HQ9ULR3 514 aa8.77□□□□□ -1.01
XRCC4-206ENST00000542685 FAM87AP0C7U9 286 aa8.76□□□□□ -1.01
XRCC4-206ENST00000542685 BMP6P22004 513 aa8.76□□□□□ -1.01
XRCC4-206ENST00000542685 ZC3H12AQ5D1E8 599 aaKnown RBP8.76□□□□□ -1.01
XRCC4-206ENST00000542685 VSIG10LQ86VR7 867 aa8.76□□□□□ -1.01
XRCC4-206ENST00000542685 C12orf49Q9H741 205 aa8.76□□□□□ -1.01
XRCC4-206ENST00000542685 SAMM50Q9Y512 469 aa8.76□□□□□ -1.01
XRCC4-206ENST00000542685 CSADQ9Y600 493 aa8.76□□□□□ -1.01
XRCC4-206ENST00000542685 PRNPP04156 253 aa8.75□□□□□ -1.01
XRCC4-206ENST00000542685 NEFMP07197 916 aa8.75□□□□□ -1.01
XRCC4-206ENST00000542685 TAL1P17542 331 aaPredicted RBP8.75□□□□□ -1.01
XRCC4-206ENST00000542685 CYP27C1Q4G0S4 372 aa8.75□□□□□ -1.01
XRCC4-206ENST00000542685 AEBP1Q8IUX7 1158 aa8.75□□□□□ -1.01
XRCC4-206ENST00000542685 ABI1Q8IZP0 508 aa8.75□□□□□ -1.01
XRCC4-206ENST00000542685 FAM8A1Q9UBU6 413 aa8.75□□□□□ -1.01
XRCC4-206ENST00000542685 PCOLCE2Q9UKZ9 415 aa8.75□□□□□ -1.01
XRCC4-206ENST00000542685 USP17L7P0C7H9 530 aa8.74□□□□□ -1.01
XRCC4-206ENST00000542685 ERVK-24P63145 666 aa8.74□□□□□ -1.01
XRCC4-206ENST00000542685 TP53INP2Q8IXH6 220 aa8.74□□□□□ -1.01
XRCC4-206ENST00000542685 ISL2Q96A47 359 aa8.74□□□□□ -1.01
XRCC4-206ENST00000542685 CELA3AP09093 270 aa8.73□□□□□ -1.01
XRCC4-206ENST00000542685 PPM1JQ5JR12 505 aa8.73□□□□□ -1.01
XRCC4-206ENST00000542685 LLGL2Q6P1M3 1020 aa8.73□□□□□ -1.01
XRCC4-206ENST00000542685 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.73□□□□□ -1.01
XRCC4-206ENST00000542685 RNF214Q8ND24 703 aa8.73□□□□□ -1.01
XRCC4-206ENST00000542685 FBXL18Q96ME1 805 aa8.73□□□□□ -1.01
XRCC4-206ENST00000542685 PICK1Q9NRD5 415 aa8.73□□□□□ -1.01
XRCC4-206ENST00000542685 DCDC2CA8MYV0 355 aa8.72□□□□□ -1.01
XRCC4-206ENST00000542685 LEFTY1O75610 366 aa8.72□□□□□ -1.01
XRCC4-206ENST00000542685 RASIP1Q5U651 963 aa8.72□□□□□ -1.01
XRCC4-206ENST00000542685 NFXL1Q6ZNB6 911 aa8.72□□□□□ -1.01
XRCC4-206ENST00000542685 FAM181AQ8N9Y4 354 aa8.72□□□□□ -1.01
XRCC4-206ENST00000542685 FLCNQ8NFG4 579 aa8.72□□□□□ -1.01
XRCC4-206ENST00000542685 CACNA2D2Q9NY47 1150 aa8.72□□□□□ -1.01
XRCC4-206ENST00000542685 TRIM37O94972 964 aa8.71□□□□□ -1.02
XRCC4-206ENST00000542685 LRRC14Q15048 493 aa8.71□□□□□ -1.02
XRCC4-206ENST00000542685 C12orf40Q86WS4 652 aa8.71□□□□□ -1.02
XRCC4-206ENST00000542685 KRTAP9-2Q9BYQ4 174 aa8.71□□□□□ -1.02
XRCC4-206ENST00000542685 ADGRE2Q9UHX3 823 aa8.71□□□□□ -1.02
XRCC4-206ENST00000542685 PCDHA4Q9UN74 947 aa8.71□□□□□ -1.02
XRCC4-206ENST00000542685 TTF2Q9UNY4 1162 aaKnown RBP8.71□□□□□ -1.02
XRCC4-206ENST00000542685 MYO15BQ96JP2 1530 aa8.7□□□□□ -1.02
XRCC4-206ENST00000542685 PAX4O43316 350 aa8.7□□□□□ -1.02
XRCC4-206ENST00000542685 PDIA4P13667 645 aaKnown RBP8.7□□□□□ -1.02
XRCC4-206ENST00000542685 PCNX4Q63HM2 1172 aa8.7□□□□□ -1.02
XRCC4-206ENST00000542685 DUSP23Q9BVJ7 150 aa8.7□□□□□ -1.02
XRCC4-206ENST00000542685 ANKRD33BA6NCL7 494 aa8.69□□□□□ -1.02
XRCC4-206ENST00000542685 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.69□□□□□ -1.02
XRCC4-206ENST00000542685 EIF4BP23588 611 aaKnown RBP8.69□□□□□ -1.02
XRCC4-206ENST00000542685 GNA15P30679 374 aa8.69□□□□□ -1.02
XRCC4-206ENST00000542685 SND1Q7KZF4 910 aaKnown RBP eCLIP8.69□□□□□ -1.02
XRCC4-206ENST00000542685 TOP6BLQ8N6T0 577 aa8.69□□□□□ -1.02
XRCC4-206ENST00000542685 ANKRD24Q8TF21 1146 aa8.69□□□□□ -1.02
XRCC4-206ENST00000542685 FRMD6Q96NE9 622 aa8.69□□□□□ -1.02
XRCC4-206ENST00000542685 RNF19AQ9NV58 838 aa8.69□□□□□ -1.02
XRCC4-206ENST00000542685 CYP8B1Q9UNU6 501 aa8.69□□□□□ -1.02
XRCC4-206ENST00000542685 PRPF40AO75400 957 aaKnown RBP8.68□□□□□ -1.02
XRCC4-206ENST00000542685 ARHGAP27Q6ZUM4 889 aa8.68□□□□□ -1.02
XRCC4-206ENST00000542685 PLD6Q8N2A8 252 aaKnown RBP8.68□□□□□ -1.02
XRCC4-206ENST00000542685 BCL7CQ8WUZ0 217 aaPredicted RBP8.68□□□□□ -1.02
XRCC4-206ENST00000542685 PAK6Q9NQU5 681 aaPredicted RBP8.68□□□□□ -1.02
XRCC4-206ENST00000542685 SLC5A6Q9Y289 635 aa8.68□□□□□ -1.02
XRCC4-206ENST00000542685 EAPPQ56P03 285 aaPredicted RBP8.67□□□□□ -1.02
XRCC4-206ENST00000542685 ZNF574Q6ZN55 896 aaPredicted RBP8.67□□□□□ -1.02
XRCC4-206ENST00000542685 UBE3DQ7Z6J8 389 aa8.67□□□□□ -1.02
XRCC4-206ENST00000542685 AGBL5Q8NDL9 886 aa8.67□□□□□ -1.02
XRCC4-206ENST00000542685 ELMO3Q96BJ8 720 aa8.67□□□□□ -1.02
XRCC4-206ENST00000542685 DUSP9Q99956 384 aaKnown RBP8.67□□□□□ -1.02
XRCC4-206ENST00000542685 U3KQE9 123 aa8.67□□□□□ -1.02
XRCC4-206ENST00000542685 KRTAP9-6A0A140TA67 174 aa8.66□□□□□ -1.02
XRCC4-206ENST00000542685 NTF4P34130 210 aa8.66□□□□□ -1.02
XRCC4-206ENST00000542685 BNIP3Q12983 259 aa8.66□□□□□ -1.02
XRCC4-206ENST00000542685 ZBTB37Q5TC79 503 aa8.66□□□□□ -1.02
XRCC4-206ENST00000542685 SV2BQ7L1I2 683 aa8.66□□□□□ -1.02
XRCC4-206ENST00000542685 CDC37L1Q7L3B6 337 aa8.66□□□□□ -1.02
XRCC4-206ENST00000542685 FAM9AQ8IZU1 332 aaPredicted RBP8.66□□□□□ -1.02
XRCC4-206ENST00000542685 NETO1Q8TDF5 533 aa8.66□□□□□ -1.02
XRCC4-206ENST00000542685 FANCGO15287 622 aa8.65□□□□□ -1.02
XRCC4-206ENST00000542685 PTPN11Q06124 597 aaPredicted RBP8.65□□□□□ -1.02
XRCC4-206ENST00000542685 RING1Q06587 406 aa8.65□□□□□ -1.02
XRCC4-206ENST00000542685 INPP5AQ14642 412 aa8.65□□□□□ -1.02
XRCC4-206ENST00000542685 SPRED2Q7Z698 418 aa8.65□□□□□ -1.02
XRCC4-206ENST00000542685 STK11IPQ8N1F8 1099 aa8.65□□□□□ -1.02
XRCC4-206ENST00000542685 AK5Q9Y6K8 562 aa8.65□□□□□ -1.02
XRCC4-206ENST00000542685 PRAMEF27A3QJZ7 478 aa8.64□□□□□ -1.03
XRCC4-206ENST00000542685 COL19A1Q14993 1142 aa8.64□□□□□ -1.03
XRCC4-206ENST00000542685 CCDC85BQ15834 202 aaPredicted RBP8.64□□□□□ -1.03
XRCC4-206ENST00000542685 SCARA3Q6AZY7 606 aa8.64□□□□□ -1.03
XRCC4-206ENST00000542685 TTBK2Q6IQ55 1244 aa8.64□□□□□ -1.03
XRCC4-206ENST00000542685 ITIH2P19823 946 aa8.63□□□□□ -1.03
XRCC4-206ENST00000542685 OXCT1P55809 520 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms