RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 OXER1Q8TDS5 423 aa11.02□□□□□ -0.65
LDHA-220ENST00000542179 RIOK1Q9BRS2 568 aaKnown RBP11.02□□□□□ -0.65
LDHA-220ENST00000542179 CCDC88AQ3V6T2 1871 aa11.02□□□□□ -0.65
LDHA-220ENST00000542179 MAGEB6P1A0A0J9YX57 407 aa11.01□□□□□ -0.65
LDHA-220ENST00000542179 MBD4O95243 580 aa11.01□□□□□ -0.65
LDHA-220ENST00000542179 FGAP02671 866 aa11.01□□□□□ -0.65
LDHA-220ENST00000542179 LDHCP07864 332 aa11.01□□□□□ -0.65
LDHA-220ENST00000542179 CYP21A2P08686 494 aa11.01□□□□□ -0.65
LDHA-220ENST00000542179 PSMA5P28066 241 aa11.01□□□□□ -0.65
LDHA-220ENST00000542179 PRDX5P30044 214 aa11.01□□□□□ -0.65
LDHA-220ENST00000542179 NEK4P51957 841 aa11.01□□□□□ -0.65
LDHA-220ENST00000542179 FKBP1AP62942 108 aaKnown RBP11.01□□□□□ -0.65
LDHA-220ENST00000542179 LSM11P83369 360 aaKnown RBP eCLIP11.01□□□□□ -0.65
LDHA-220ENST00000542179 DALRD3Q5D0E6 543 aaKnown RBP11.01□□□□□ -0.65
LDHA-220ENST00000542179 ADGRA1Q86SQ6 560 aa11.01□□□□□ -0.65
LDHA-220ENST00000542179 HSCBQ8IWL3 235 aa11.01□□□□□ -0.65
LDHA-220ENST00000542179 SPON1Q9HCB6 807 aa11.01□□□□□ -0.65
LDHA-220ENST00000542179 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.01□□□□□ -0.65
LDHA-220ENST00000542179 DAXXQ9UER7 740 aaPredicted RBP11.01□□□□□ -0.65
LDHA-220ENST00000542179 BRCA1P38398 1863 aaKnown RBP11.01□□□□□ -0.65
LDHA-220ENST00000542179 PPP4CP60510 307 aa11□□□□□ -0.65
LDHA-220ENST00000542179 GTF2IP78347 998 aa11□□□□□ -0.65
LDHA-220ENST00000542179 MFSD14BQ5SR56 506 aa11□□□□□ -0.65
LDHA-220ENST00000542179 DZIP1Q86YF9 867 aaKnown RBP11□□□□□ -0.65
LDHA-220ENST00000542179 CERS3Q8IU89 383 aa11□□□□□ -0.65
LDHA-220ENST00000542179 LCORLQ8N3X6 602 aa11□□□□□ -0.65
LDHA-220ENST00000542179 ALDH8A1Q9H2A2 487 aaPredicted RBP11□□□□□ -0.65
LDHA-220ENST00000542179 ARMT1Q9H993 441 aa11□□□□□ -0.65
LDHA-220ENST00000542179 GSG1L2A8MUP6 293 aa10.99□□□□□ -0.65
LDHA-220ENST00000542179 CD2BP2O95400 341 aaKnown RBP10.99□□□□□ -0.65
LDHA-220ENST00000542179 IMMTQ16891 758 aaKnown RBP10.99□□□□□ -0.65
LDHA-220ENST00000542179 ADCK5Q3MIX3 580 aa10.99□□□□□ -0.65
LDHA-220ENST00000542179 PPP4R3BQ5MIZ7 849 aa10.99□□□□□ -0.65
LDHA-220ENST00000542179 STRIP1Q5VSL9 837 aa10.99□□□□□ -0.65
LDHA-220ENST00000542179 TTLL5Q6EMB2 1281 aa10.99□□□□□ -0.65
LDHA-220ENST00000542179 GIMAP6Q6P9H5 292 aa10.99□□□□□ -0.65
LDHA-220ENST00000542179 RUFY3Q7L099 469 aa10.99□□□□□ -0.65
LDHA-220ENST00000542179 SLF2Q8IX21 1173 aa10.99□□□□□ -0.65
LDHA-220ENST00000542179 IFNL3Q8IZI9 196 aa10.99□□□□□ -0.65
LDHA-220ENST00000542179 MIGA1Q8NAN2 632 aa10.99□□□□□ -0.65
LDHA-220ENST00000542179 JAKMIP1Q96N16 626 aaKnown RBP10.99□□□□□ -0.65
LDHA-220ENST00000542179 TTC14Q96N46 770 aa10.99□□□□□ -0.65
LDHA-220ENST00000542179 MRIQ9BWK5 157 aa10.99□□□□□ -0.65
LDHA-220ENST00000542179 NACAP1Q9BZK3 213 aa10.99□□□□□ -0.65
LDHA-220ENST00000542179 JAG2Q9Y219 1238 aa10.99□□□□□ -0.65
LDHA-220ENST00000542179 CYP46A1Q9Y6A2 500 aa10.99□□□□□ -0.65
LDHA-220ENST00000542179 CHD4Q14839 1912 aa10.99□□□□□ -0.65
LDHA-220ENST00000542179 GPR75-ASB3A0A0A6YYF3 556 aa10.98□□□□□ -0.65
LDHA-220ENST00000542179 K7ELQ4 463 aaPredicted RBP10.98□□□□□ -0.65
LDHA-220ENST00000542179 ZNF213O14771 459 aa10.98□□□□□ -0.65
LDHA-220ENST00000542179 ECE2O60344 883 aa10.98□□□□□ -0.65
LDHA-220ENST00000542179 BAG3O95817 575 aa10.98□□□□□ -0.65
LDHA-220ENST00000542179 APPP05067 770 aa10.98□□□□□ -0.65
LDHA-220ENST00000542179 HMGB1P09429 215 aaKnown RBP10.98□□□□□ -0.65
LDHA-220ENST00000542179 GRIK5Q16478 980 aa10.98□□□□□ -0.65
LDHA-220ENST00000542179 NEK1Q96PY6 1258 aa10.98□□□□□ -0.65
LDHA-220ENST00000542179 TAF6LQ9Y6J9 622 aa10.98□□□□□ -0.65
LDHA-220ENST00000542179 SLC4A4Q9Y6R1 1079 aa10.98□□□□□ -0.65
LDHA-220ENST00000542179 MROH7-TTC4A0A0A0MT08 1334 aa10.98□□□□□ -0.65
LDHA-220ENST00000542179 GAKO14976 1311 aa10.98□□□□□ -0.65
LDHA-220ENST00000542179 USP17L3A6NCW0 530 aa10.97□□□□□ -0.65
LDHA-220ENST00000542179 USP17L4A6NCW7 530 aa10.97□□□□□ -0.65
LDHA-220ENST00000542179 E7EWF7 191 aa10.97□□□□□ -0.65
LDHA-220ENST00000542179 ARHGAP33O14559 1287 aa10.97□□□□□ -0.65
LDHA-220ENST00000542179 PPIP5K2O43314 1243 aa10.97□□□□□ -0.65
LDHA-220ENST00000542179 CASTP20810 708 aaKnown RBP10.97□□□□□ -0.65
LDHA-220ENST00000542179 SLC4A3P48751 1232 aa10.97□□□□□ -0.65
LDHA-220ENST00000542179 DYNLL1P63167 89 aaKnown RBP10.97□□□□□ -0.65
LDHA-220ENST00000542179 MFSD10Q14728 455 aa10.97□□□□□ -0.65
LDHA-220ENST00000542179 AOC3Q16853 763 aa10.97□□□□□ -0.65
LDHA-220ENST00000542179 DACT2Q5SW24 774 aa10.97□□□□□ -0.65
LDHA-220ENST00000542179 BLOC1S2Q6QNY1 142 aa10.97□□□□□ -0.65
LDHA-220ENST00000542179 USP17L1Q7RTZ2 530 aa10.97□□□□□ -0.65
LDHA-220ENST00000542179 CERS5Q8N5B7 392 aa10.97□□□□□ -0.65
LDHA-220ENST00000542179 SPRYD3Q8NCJ5 442 aa10.97□□□□□ -0.65
LDHA-220ENST00000542179 UPF3BQ9BZI7 483 aaKnown RBP10.97□□□□□ -0.65
LDHA-220ENST00000542179 CRNKL1Q9BZJ0 848 aaKnown RBP10.97□□□□□ -0.65
LDHA-220ENST00000542179 NAPBQ9H115 298 aa10.97□□□□□ -0.65
LDHA-220ENST00000542179 DBNDD1Q9H9R9 158 aa10.97□□□□□ -0.65
LDHA-220ENST00000542179 EPB41L4AQ9HCS5 686 aaPredicted RBP10.97□□□□□ -0.65
LDHA-220ENST00000542179 ATP8A2Q9NTI2 1148 aa10.97□□□□□ -0.65
LDHA-220ENST00000542179 FER1L6Q2WGJ9 1857 aa10.96□□□□□ -0.65
LDHA-220ENST00000542179 ZNF646O15015 1829 aaPredicted RBP10.96□□□□□ -0.65
LDHA-220ENST00000542179 LTBP3Q9NS15 1303 aa10.96□□□□□ -0.65
LDHA-220ENST00000542179 PRKAB2O43741 272 aa10.96□□□□□ -0.65
LDHA-220ENST00000542179 RPS6KB1P23443 525 aa10.96□□□□□ -0.65
LDHA-220ENST00000542179 HDLBPQ00341 1268 aaKnown RBP10.96□□□□□ -0.65
LDHA-220ENST00000542179 HHIPL2Q6UWX4 724 aa10.96□□□□□ -0.65
LDHA-220ENST00000542179 STOX1Q6ZVD7 989 aa10.96□□□□□ -0.65
LDHA-220ENST00000542179 FBXL16Q8N461 479 aa10.96□□□□□ -0.65
LDHA-220ENST00000542179 RNF166Q96A37 237 aaPredicted RBP10.96□□□□□ -0.65
LDHA-220ENST00000542179 NOL10Q9BSC4 688 aaKnown RBP10.96□□□□□ -0.65
LDHA-220ENST00000542179 PDRG1Q9NUG6 133 aa10.96□□□□□ -0.65
LDHA-220ENST00000542179 AATFQ9NY61 560 aaKnown RBP eCLIP10.96□□□□□ -0.65
LDHA-220ENST00000542179 PPP1R1BQ9UD71 204 aaPredicted RBP10.96□□□□□ -0.65
LDHA-220ENST00000542179 ANAPC4Q9UJX5 808 aa10.96□□□□□ -0.65
LDHA-220ENST00000542179 LAMA4Q16363 1823 aa10.95□□□□□ -0.66
LDHA-220ENST00000542179 WDR19Q8NEZ3 1342 aa10.95□□□□□ -0.66
LDHA-220ENST00000542179 IARSP41252 1262 aaKnown RBP10.95□□□□□ -0.66
LDHA-220ENST00000542179 AK2P54819 239 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms