RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 CTAGE5O15320 804 aa12.6□□□□□ -0.39
NECAP1-206ENST00000542095 YEATS4O95619 227 aa12.6□□□□□ -0.39
NECAP1-206ENST00000542095 KLRK1P26718 216 aa12.6□□□□□ -0.39
NECAP1-206ENST00000542095 KIF23Q02241 960 aaPredicted RBP12.6□□□□□ -0.39
NECAP1-206ENST00000542095 MYSM1Q5VVJ2 828 aa12.6□□□□□ -0.39
NECAP1-206ENST00000542095 SASS6Q6UVJ0 657 aa12.6□□□□□ -0.39
NECAP1-206ENST00000542095 CCDC144CPQ8IYA2 1237 aa12.6□□□□□ -0.39
NECAP1-206ENST00000542095 FAM200AQ8TCP9 573 aa12.6□□□□□ -0.39
NECAP1-206ENST00000542095 BRIP1Q9BX63 1249 aa12.6□□□□□ -0.39
NECAP1-206ENST00000542095 POLR3EQ9NVU0 708 aa12.6□□□□□ -0.39
NECAP1-206ENST00000542095 MRVI1Q9Y6F6 885 aa12.6□□□□□ -0.39
NECAP1-206ENST00000542095 DUOX1Q9NRD9 1551 aa12.6□□□□□ -0.39
NECAP1-206ENST00000542095 DLEC1Q9Y238 1755 aa12.6□□□□□ -0.39
NECAP1-206ENST00000542095 ZBTB22O15209 634 aa12.59□□□□□ -0.39
NECAP1-206ENST00000542095 POLR3DP05423 398 aaPredicted RBP12.59□□□□□ -0.39
NECAP1-206ENST00000542095 PTMAP06454 111 aaKnown RBP12.59□□□□□ -0.39
NECAP1-206ENST00000542095 SSRP1Q08945 709 aaKnown RBP12.59□□□□□ -0.39
NECAP1-206ENST00000542095 STK38Q15208 465 aa12.59□□□□□ -0.39
NECAP1-206ENST00000542095 NTRK3Q16288 839 aa12.59□□□□□ -0.39
NECAP1-206ENST00000542095 TMED8Q6PL24 325 aaPredicted RBP12.59□□□□□ -0.39
NECAP1-206ENST00000542095 KCNG4Q8TDN1 519 aa12.59□□□□□ -0.39
NECAP1-206ENST00000542095 MYL10Q9BUA6 226 aa12.59□□□□□ -0.39
NECAP1-206ENST00000542095 FAM217BQ9NTX9 383 aaPredicted RBP12.59□□□□□ -0.39
NECAP1-206ENST00000542095 TFCP2L1Q9NZI6 479 aa12.59□□□□□ -0.39
NECAP1-206ENST00000542095 RCAN1P53805 252 aa12.59□□□□□ -0.39
NECAP1-206ENST00000542095 TRIM29Q14134 588 aa12.59□□□□□ -0.39
NECAP1-206ENST00000542095 NFIXQ14938 502 aa12.59□□□□□ -0.39
NECAP1-206ENST00000542095 SF3A1Q15459 793 aaKnown RBP12.59□□□□□ -0.39
NECAP1-206ENST00000542095 ADALQ6DHV7 355 aa12.59□□□□□ -0.39
NECAP1-206ENST00000542095 CNBD1Q8NA66 436 aa12.59□□□□□ -0.39
NECAP1-206ENST00000542095 LINC00301Q8NCQ3 95 aa12.59□□□□□ -0.39
NECAP1-206ENST00000542095 WASF1Q92558 559 aa12.59□□□□□ -0.39
NECAP1-206ENST00000542095 ESR2Q92731 530 aa12.59□□□□□ -0.39
NECAP1-206ENST00000542095 PHKBQ93100 1093 aa12.59□□□□□ -0.39
NECAP1-206ENST00000542095 NSUN4Q96CB9 384 aaKnown RBP12.59□□□□□ -0.39
NECAP1-206ENST00000542095 UBAC1Q9BSL1 405 aa12.59□□□□□ -0.39
NECAP1-206ENST00000542095 ADCY5O95622 1261 aa12.58□□□□□ -0.4
NECAP1-206ENST00000542095 DYNLL1P63167 89 aaKnown RBP12.58□□□□□ -0.4
NECAP1-206ENST00000542095 FAM160A1Q05DH4 1040 aa12.58□□□□□ -0.4
NECAP1-206ENST00000542095 GRAPQ13588 217 aa12.58□□□□□ -0.4
NECAP1-206ENST00000542095 STK11IPQ8N1F8 1099 aa12.58□□□□□ -0.4
NECAP1-206ENST00000542095 GRAPLQ8TC17 118 aaPredicted RBP12.58□□□□□ -0.4
NECAP1-206ENST00000542095 ZKSCAN3Q9BRR0 538 aa12.58□□□□□ -0.4
NECAP1-206ENST00000542095 GJB4Q9NTQ9 266 aa12.58□□□□□ -0.4
NECAP1-206ENST00000542095 CCDC196A0A1B0GTZ2 297 aa12.58□□□□□ -0.4
NECAP1-206ENST00000542095 A0A1W2PQ27 194 aa12.58□□□□□ -0.4
NECAP1-206ENST00000542095 A0A1W2PQ64 194 aa12.58□□□□□ -0.4
NECAP1-206ENST00000542095 A0A1W2PQD8 194 aa12.58□□□□□ -0.4
NECAP1-206ENST00000542095 KIF28PB7ZC32 967 aa12.58□□□□□ -0.4
NECAP1-206ENST00000542095 RANBP6O60518 1105 aaKnown RBP12.58□□□□□ -0.4
NECAP1-206ENST00000542095 KINO60870 393 aaKnown RBP12.58□□□□□ -0.4
NECAP1-206ENST00000542095 FMNL1O95466 1100 aaPredicted RBP12.58□□□□□ -0.4
NECAP1-206ENST00000542095 PCP11498 1178 aaKnown RBP12.58□□□□□ -0.4
NECAP1-206ENST00000542095 IFNAR1P17181 557 aa12.58□□□□□ -0.4
NECAP1-206ENST00000542095 MECOMQ03112 1051 aa12.58□□□□□ -0.4
NECAP1-206ENST00000542095 CHAF1AQ13111 956 aaPredicted RBP12.58□□□□□ -0.4
NECAP1-206ENST00000542095 RTN1Q16799 776 aa12.58□□□□□ -0.4
NECAP1-206ENST00000542095 KRT40Q6A162 431 aa12.58□□□□□ -0.4
NECAP1-206ENST00000542095 FSIP1Q8NA03 581 aa12.58□□□□□ -0.4
NECAP1-206ENST00000542095 CERKQ8TCT0 537 aa12.58□□□□□ -0.4
NECAP1-206ENST00000542095 ZNF384Q8TF68 577 aa12.58□□□□□ -0.4
NECAP1-206ENST00000542095 MRPS27Q92552 414 aaKnown RBP12.58□□□□□ -0.4
NECAP1-206ENST00000542095 GOLPH3LQ9H4A5 285 aa12.58□□□□□ -0.4
NECAP1-206ENST00000542095 PCDHA7Q9UN72 937 aa12.58□□□□□ -0.4
NECAP1-206ENST00000542095 ZKSCAN5Q9Y2L8 839 aa12.58□□□□□ -0.4
NECAP1-206ENST00000542095 CLIC4Q9Y696 253 aa12.58□□□□□ -0.4
NECAP1-206ENST00000542095 CAVIN2O95810 425 aa12.57□□□□□ -0.4
NECAP1-206ENST00000542095 HSPA1LP34931 641 aa12.57□□□□□ -0.4
NECAP1-206ENST00000542095 SNW1Q13573 536 aaKnown RBP12.57□□□□□ -0.4
NECAP1-206ENST00000542095 GNL2Q13823 731 aaKnown RBP12.57□□□□□ -0.4
NECAP1-206ENST00000542095 ANO6Q4KMQ2 910 aa12.57□□□□□ -0.4
NECAP1-206ENST00000542095 TRIM22Q8IYM9 498 aa12.57□□□□□ -0.4
NECAP1-206ENST00000542095 AIFM3Q96NN9 605 aa12.57□□□□□ -0.4
NECAP1-206ENST00000542095 SLC26A6Q9BXS9 759 aa12.57□□□□□ -0.4
NECAP1-206ENST00000542095 LRRC4BQ9NT99 713 aa12.57□□□□□ -0.4
NECAP1-206ENST00000542095 LEMD3Q9Y2U8 911 aa12.57□□□□□ -0.4
NECAP1-206ENST00000542095 BRWD3Q6RI45 1802 aa12.57□□□□□ -0.4
NECAP1-206ENST00000542095 SPTLC2O15270 562 aa12.57□□□□□ -0.4
NECAP1-206ENST00000542095 ANO1Q5XXA6 986 aa12.57□□□□□ -0.4
NECAP1-206ENST00000542095 SPTY2D1Q68D10 685 aaPredicted RBP12.57□□□□□ -0.4
NECAP1-206ENST00000542095 ENGASEQ8NFI3 743 aa12.57□□□□□ -0.4
NECAP1-206ENST00000542095 CRNKL1Q9BZJ0 848 aaKnown RBP12.57□□□□□ -0.4
NECAP1-206ENST00000542095 ANKIB1Q9P2G1 1089 aa12.57□□□□□ -0.4
NECAP1-206ENST00000542095 IRS2Q9Y4H2 1338 aa12.56□□□□□ -0.4
NECAP1-206ENST00000542095 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.56□□□□□ -0.4
NECAP1-206ENST00000542095 IGSF3O75054 1194 aa12.56□□□□□ -0.4
NECAP1-206ENST00000542095 ZNF654Q8IZM8 581 aa12.56□□□□□ -0.4
NECAP1-206ENST00000542095 TNKSO95271 1327 aa12.56□□□□□ -0.4
NECAP1-206ENST00000542095 PLCB2Q00722 1185 aa12.56□□□□□ -0.4
NECAP1-206ENST00000542095 PPP2R5BQ15173 497 aa12.56□□□□□ -0.4
NECAP1-206ENST00000542095 SLC27A3Q5K4L6 730 aa12.56□□□□□ -0.4
NECAP1-206ENST00000542095 XDHP47989 1333 aa12.55□□□□□ -0.4
NECAP1-206ENST00000542095 FGRP09769 529 aa12.55□□□□□ -0.4
NECAP1-206ENST00000542095 PRDX5P30044 214 aa12.55□□□□□ -0.4
NECAP1-206ENST00000542095 SEC23AQ15436 765 aa12.55□□□□□ -0.4
NECAP1-206ENST00000542095 CTR9Q6PD62 1173 aa12.55□□□□□ -0.4
NECAP1-206ENST00000542095 TXNRD3Q86VQ6 643 aa12.55□□□□□ -0.4
NECAP1-206ENST00000542095 DZIP1Q86YF9 867 aaKnown RBP12.55□□□□□ -0.4
NECAP1-206ENST00000542095 FANCBQ8NB91 859 aa12.55□□□□□ -0.4
NECAP1-206ENST00000542095 RPGRQ92834 1020 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms