RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 SMARCA4P51532 1647 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 THOC2Q8NI27 1593 aaKnown RBP5.86□□□□□ -1.47
SNHG1-218ENST00000541615 SPATA31E1Q6ZUB1 1445 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 EME2A4GXA9 379 aaPredicted RBP5.86□□□□□ -1.47
SNHG1-218ENST00000541615 TMEM221A6NGB7 291 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 SRRM3A6NNA2 597 aaPredicted RBP5.86□□□□□ -1.47
SNHG1-218ENST00000541615 BIRC5O15392 142 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 P4HA2O15460 535 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 PRC1O43663 620 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 TBCAO75347 108 aaKnown RBP5.86□□□□□ -1.47
SNHG1-218ENST00000541615 ATP6V1G1O75348 118 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 STAM2O75886 525 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 SMARCA1P28370 1054 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 LIG3P49916 1009 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 CCT8P50990 548 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 ZNF132P52740 706 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 HDAC4P56524 1084 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 TUBA1BP68363 451 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 TUBA4AP68366 448 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 PHEXP78562 749 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 SLC7A5Q01650 507 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 ZBTB17Q13105 803 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 SNX1Q13596 522 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 RCN1Q15293 331 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 ERCC6LQ2NKX8 1250 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 CCDC40Q4G0X9 1142 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 CCDC122Q5T0U0 273 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 NBPF14Q5TI25 921 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 MIS18BP1Q6P0N0 1132 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 CWC27Q6UX04 472 aaKnown RBP5.86□□□□□ -1.47
SNHG1-218ENST00000541615 TUBA1AQ71U36 451 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 KIAA0825Q8IV33 1275 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 MYO1HQ8N1T3 1032 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 C17orf53Q8N3J3 647 aaPredicted RBP5.86□□□□□ -1.47
SNHG1-218ENST00000541615 TRIML1Q8N9V2 468 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 ZBTB8BQ8NAP8 495 aaPredicted RBP5.86□□□□□ -1.47
SNHG1-218ENST00000541615 PPP1R14CQ8TAE6 165 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 AFAP1L1Q8TED9 768 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 KAT2BQ92831 832 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 SMARCC1Q92922 1105 aaPredicted RBP5.86□□□□□ -1.47
SNHG1-218ENST00000541615 NACC2Q96BF6 587 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 LRCH3Q96II8 777 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 MAML3Q96JK9 1138 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 TTC14Q96N46 770 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 FUT8Q9BYC5 575 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 SEZ6LQ9BYH1 1024 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 VCX3AQ9NNX9 186 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 SEPT10Q9P0V9 454 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 VPS18Q9P253 973 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 ANKIB1Q9P2G1 1089 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 ATXN10Q9UBB4 475 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 ZMAT5Q9UDW3 170 aaKnown RBP5.86□□□□□ -1.47
SNHG1-218ENST00000541615 DNAI1Q9UI46 699 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 PHF24Q9UPV7 400 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 CAPN7Q9Y6W3 813 aa5.86□□□□□ -1.47
SNHG1-218ENST00000541615 EIF4G1Q04637 1599 aaKnown RBP5.85□□□□□ -1.47
SNHG1-218ENST00000541615 REREQ9P2R6 1566 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 FYCO1Q9BQS8 1478 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 AATKQ6ZMQ8 1374 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 PABPN1LA6NDY0 278 aaKnown RBP5.85□□□□□ -1.47
SNHG1-218ENST00000541615 RASSF10A6NK89 507 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 SPDYE16A6NNV3 312 aaPredicted RBP5.85□□□□□ -1.47
SNHG1-218ENST00000541615 TMEM110-MUSTN1A8MSY1 372 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 SLC27A2O14975 620 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 MGEA5O60502 916 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 SHOX2O60902 331 aaPredicted RBP5.85□□□□□ -1.47
SNHG1-218ENST00000541615 VIMP08670 466 aaKnown RBP5.85□□□□□ -1.47
SNHG1-218ENST00000541615 RPSAP08865 295 aaKnown RBP5.85□□□□□ -1.47
SNHG1-218ENST00000541615 PSMC4P43686 418 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 USP5P45974 858 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 CSE1LP55060 971 aaKnown RBP5.85□□□□□ -1.47
SNHG1-218ENST00000541615 MRPS25P82663 173 aaKnown RBP5.85□□□□□ -1.47
SNHG1-218ENST00000541615 SNW1Q13573 536 aaKnown RBP5.85□□□□□ -1.47
SNHG1-218ENST00000541615 EIF4A2Q14240 407 aaKnown RBP5.85□□□□□ -1.47
SNHG1-218ENST00000541615 AKNAD1Q5T1N1 836 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 NUTM2DQ5VT03 806 aaPredicted RBP5.85□□□□□ -1.47
SNHG1-218ENST00000541615 THOC7Q6I9Y2 204 aaKnown RBP5.85□□□□□ -1.47
SNHG1-218ENST00000541615 OLFML1Q6UWY5 402 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 TMEM110Q86TL2 294 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 SKAP1Q86WV1 359 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 SLF2Q8IX21 1173 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 CEP57L1Q8IYX8 460 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 ARHGAP18Q8N392 663 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 TRPC4APQ8TEL6 797 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 LEO1Q8WVC0 666 aaPredicted RBP5.85□□□□□ -1.47
SNHG1-218ENST00000541615 ZNF653Q96CK0 615 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 TBC1D31Q96DN5 1066 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 SMC6Q96SB8 1091 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 MPHOSPH8Q99549 860 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 CORO1BQ9BR76 489 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 PHACTR1Q9C0D0 580 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 TAOK3Q9H2K8 898 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 MRPL46Q9H2W6 279 aaKnown RBP5.85□□□□□ -1.47
SNHG1-218ENST00000541615 RPAP3Q9H6T3 665 aaPredicted RBP5.85□□□□□ -1.47
SNHG1-218ENST00000541615 MIS18AQ9NYP9 233 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 IMPACTQ9P2X3 320 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 PCSK1NQ9UHG2 260 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 FBXO9Q9UK97 447 aaPredicted RBP5.85□□□□□ -1.47
SNHG1-218ENST00000541615 EXOC6BQ9Y2D4 811 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 CARD8Q9Y2G2 431 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms