RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 PCDHGC5Q9Y5F6 944 aa6.77□□□□□ -1.33
SNHG1-217ENST00000541578 CPSF6Q16630 551 aaKnown RBP eCLIP6.76□□□□□ -1.33
SNHG1-217ENST00000541578 DUSP27Q5VZP5 1158 aa6.76□□□□□ -1.33
SNHG1-217ENST00000541578 LLGL2Q6P1M3 1020 aa6.76□□□□□ -1.33
SNHG1-217ENST00000541578 SMYD4Q8IYR2 804 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-217ENST00000541578 SHISA5Q8N114 240 aa6.76□□□□□ -1.33
SNHG1-217ENST00000541578 ZNF428Q96B54 188 aa6.76□□□□□ -1.33
SNHG1-217ENST00000541578 LGR6Q9HBX8 967 aa6.76□□□□□ -1.33
SNHG1-217ENST00000541578 RNF19AQ9NV58 838 aa6.76□□□□□ -1.33
SNHG1-217ENST00000541578 PARP2Q9UGN5 583 aa6.76□□□□□ -1.33
SNHG1-217ENST00000541578 CYP8B1Q9UNU6 501 aa6.76□□□□□ -1.33
SNHG1-217ENST00000541578 KIAA1324LA8MWY0 1029 aaPredicted RBP6.75□□□□□ -1.33
SNHG1-217ENST00000541578 DYNC1LI2O43237 492 aaPredicted RBP6.75□□□□□ -1.33
SNHG1-217ENST00000541578 RNGTTO60942 597 aaKnown RBP6.75□□□□□ -1.33
SNHG1-217ENST00000541578 TRIM37O94972 964 aa6.75□□□□□ -1.33
SNHG1-217ENST00000541578 CELA3AP09093 270 aa6.75□□□□□ -1.33
SNHG1-217ENST00000541578 ERCC3P19447 782 aa6.75□□□□□ -1.33
SNHG1-217ENST00000541578 XPCQ01831 940 aaPredicted RBP6.75□□□□□ -1.33
SNHG1-217ENST00000541578 CYP27A1Q02318 531 aa6.75□□□□□ -1.33
SNHG1-217ENST00000541578 PSMD2Q13200 908 aa6.75□□□□□ -1.33
SNHG1-217ENST00000541578 TTLL4Q14679 1199 aa6.75□□□□□ -1.33
SNHG1-217ENST00000541578 ZC3H12AQ5D1E8 599 aaKnown RBP6.75□□□□□ -1.33
SNHG1-217ENST00000541578 PCNX4Q63HM2 1172 aa6.75□□□□□ -1.33
SNHG1-217ENST00000541578 SCARA3Q6AZY7 606 aa6.75□□□□□ -1.33
SNHG1-217ENST00000541578 SEZ6L2Q6UXD5 910 aa6.75□□□□□ -1.33
SNHG1-217ENST00000541578 MPRIPQ6WCQ1 1025 aa6.75□□□□□ -1.33
SNHG1-217ENST00000541578 GATA6Q92908 595 aa6.75□□□□□ -1.33
SNHG1-217ENST00000541578 C1GALT1Q9NS00 363 aa6.75□□□□□ -1.33
SNHG1-217ENST00000541578 CACNA2D2Q9NY47 1150 aa6.75□□□□□ -1.33
SNHG1-217ENST00000541578 FAM170BA6NMN3 283 aa6.74□□□□□ -1.33
SNHG1-217ENST00000541578 ERVK-24P63145 666 aa6.74□□□□□ -1.33
SNHG1-217ENST00000541578 CCDC85BQ15834 202 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-217ENST00000541578 SSU72Q9NP77 194 aaKnown RBP6.74□□□□□ -1.33
SNHG1-217ENST00000541578 PCOLCE2Q9UKZ9 415 aa6.74□□□□□ -1.33
SNHG1-217ENST00000541578 HCLS1P14317 486 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-217ENST00000541578 FOSL1P15407 271 aa6.73□□□□□ -1.33
SNHG1-217ENST00000541578 HOXA10P31260 410 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-217ENST00000541578 DAB2P98082 770 aa6.73□□□□□ -1.33
SNHG1-217ENST00000541578 RASIP1Q5U651 963 aa6.73□□□□□ -1.33
SNHG1-217ENST00000541578 OGFOD3Q6PK18 319 aa6.73□□□□□ -1.33
SNHG1-217ENST00000541578 FBXO33Q7Z6M2 555 aa6.73□□□□□ -1.33
SNHG1-217ENST00000541578 RNF214Q8ND24 703 aa6.73□□□□□ -1.33
SNHG1-217ENST00000541578 CYP26A1O43174 497 aa6.72□□□□□ -1.33
SNHG1-217ENST00000541578 SPINK2P20155 84 aa6.72□□□□□ -1.33
SNHG1-217ENST00000541578 ZNF765Q7L2R6 523 aa6.72□□□□□ -1.33
SNHG1-217ENST00000541578 DTX1Q86Y01 620 aa6.72□□□□□ -1.33
SNHG1-217ENST00000541578 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.72□□□□□ -1.33
SNHG1-217ENST00000541578 PICK1Q9NRD5 415 aa6.72□□□□□ -1.33
SNHG1-217ENST00000541578 PCDHA4Q9UN74 947 aa6.72□□□□□ -1.33
SNHG1-217ENST00000541578 CSADQ9Y600 493 aa6.72□□□□□ -1.33
SNHG1-217ENST00000541578 DCDC2CA8MYV0 355 aa6.71□□□□□ -1.34
SNHG1-217ENST00000541578 NEFMP07197 916 aa6.71□□□□□ -1.34
SNHG1-217ENST00000541578 CDK5R2Q13319 367 aa6.71□□□□□ -1.34
SNHG1-217ENST00000541578 CYP27C1Q4G0S4 372 aa6.71□□□□□ -1.34
SNHG1-217ENST00000541578 TTBK2Q6IQ55 1244 aa6.71□□□□□ -1.34
SNHG1-217ENST00000541578 TMC4Q7Z404 712 aa6.71□□□□□ -1.34
SNHG1-217ENST00000541578 ISL2Q96A47 359 aa6.71□□□□□ -1.34
SNHG1-217ENST00000541578 LMNB1P20700 586 aa6.7□□□□□ -1.34
SNHG1-217ENST00000541578 PPM1JQ5JR12 505 aa6.7□□□□□ -1.34
SNHG1-217ENST00000541578 C12orf40Q86WS4 652 aa6.7□□□□□ -1.34
SNHG1-217ENST00000541578 FAM161BQ96MY7 647 aa6.7□□□□□ -1.34
SNHG1-217ENST00000541578 BCL11AQ9H165 835 aa6.7□□□□□ -1.34
SNHG1-217ENST00000541578 LRRC4CQ9HCJ2 640 aa6.7□□□□□ -1.34
SNHG1-217ENST00000541578 FANCGO15287 622 aa6.69□□□□□ -1.34
SNHG1-217ENST00000541578 WNT11O96014 354 aa6.69□□□□□ -1.34
SNHG1-217ENST00000541578 FAM87AP0C7U9 286 aa6.69□□□□□ -1.34
SNHG1-217ENST00000541578 RPS26P62854 115 aaKnown RBP6.69□□□□□ -1.34
SNHG1-217ENST00000541578 TAGLNQ01995 201 aaKnown RBP6.69□□□□□ -1.34
SNHG1-217ENST00000541578 PTPN11Q06124 597 aaPredicted RBP6.69□□□□□ -1.34
SNHG1-217ENST00000541578 TAF1CQ15572 869 aaPredicted RBP6.69□□□□□ -1.34
SNHG1-217ENST00000541578 MAP3K11Q16584 847 aa6.69□□□□□ -1.34
SNHG1-217ENST00000541578 MEI1Q5TIA1 1274 aa6.69□□□□□ -1.34
SNHG1-217ENST00000541578 HDXQ7Z353 690 aa6.69□□□□□ -1.34
SNHG1-217ENST00000541578 ELMO3Q96BJ8 720 aa6.69□□□□□ -1.34
SNHG1-217ENST00000541578 SORBS3O60504 671 aa6.68□□□□□ -1.34
SNHG1-217ENST00000541578 RLBP1P12271 317 aa6.68□□□□□ -1.34
SNHG1-217ENST00000541578 ITGAEP38570 1179 aa6.68□□□□□ -1.34
SNHG1-217ENST00000541578 RING1Q06587 406 aa6.68□□□□□ -1.34
SNHG1-217ENST00000541578 MSMPQ1L6U9 139 aa6.68□□□□□ -1.34
SNHG1-217ENST00000541578 CDC37L1Q7L3B6 337 aa6.68□□□□□ -1.34
SNHG1-217ENST00000541578 MRS2Q9HD23 443 aa6.68□□□□□ -1.34
SNHG1-217ENST00000541578 ADAMTS4O75173 837 aa6.67□□□□□ -1.34
SNHG1-217ENST00000541578 LIG3P49916 1009 aa6.67□□□□□ -1.34
SNHG1-217ENST00000541578 ST13P50502 369 aaKnown RBP6.67□□□□□ -1.34
SNHG1-217ENST00000541578 INPP5AQ14642 412 aa6.67□□□□□ -1.34
SNHG1-217ENST00000541578 ZBTB37Q5TC79 503 aa6.67□□□□□ -1.34
SNHG1-217ENST00000541578 AGMOQ6ZNB7 445 aa6.67□□□□□ -1.34
SNHG1-217ENST00000541578 NOC4LQ9BVI4 516 aaKnown RBP6.67□□□□□ -1.34
SNHG1-217ENST00000541578 BSDC1Q9NW68 430 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-217ENST00000541578 VTI1BQ9UEU0 232 aa6.67□□□□□ -1.34
SNHG1-217ENST00000541578 ANGEL1Q9UNK9 670 aaKnown RBP6.67□□□□□ -1.34
SNHG1-217ENST00000541578 USP31Q70CQ4 1352 aa6.67□□□□□ -1.34
SNHG1-217ENST00000541578 CTSHP09668 335 aa6.66□□□□□ -1.34
SNHG1-217ENST00000541578 NTF4P34130 210 aa6.66□□□□□ -1.34
SNHG1-217ENST00000541578 GP2P55259 537 aaKnown RBP6.66□□□□□ -1.34
SNHG1-217ENST00000541578 LRFN4Q6PJG9 635 aa6.66□□□□□ -1.34
SNHG1-217ENST00000541578 CYFIP1Q7L576 1253 aa6.66□□□□□ -1.34
SNHG1-217ENST00000541578 KCT2Q8NC54 265 aa6.66□□□□□ -1.34
SNHG1-217ENST00000541578 ZNF507Q8TCN5 953 aa6.66□□□□□ -1.34
SNHG1-217ENST00000541578 GAL3ST3Q96A11 431 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms