RNA–Protein interactions for RNA: ENST00000541425.5

SLC3A2-217, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-217ENST00000541425 RPAP1Q9BWH6 1393 aaPredicted RBP13.22□□□□□ -0.29
SLC3A2-217ENST00000541425 SALL3Q9BXA9 1300 aa13.22□□□□□ -0.29
SLC3A2-217ENST00000541425 WDR33Q9C0J8 1336 aaKnown RBP13.22□□□□□ -0.29
SLC3A2-217ENST00000541425 TRIM6-TRIM34B2RNG4 842 aa13.22□□□□□ -0.29
SLC3A2-217ENST00000541425 ADD2P35612 726 aa13.22□□□□□ -0.29
SLC3A2-217ENST00000541425 VEGFBP49765 207 aa13.22□□□□□ -0.29
SLC3A2-217ENST00000541425 MIGA2Q7L4E1 593 aa13.22□□□□□ -0.29
SLC3A2-217ENST00000541425 ZFPM1Q8IX07 1006 aa13.22□□□□□ -0.29
SLC3A2-217ENST00000541425 DNAJC5GQ8N7S2 189 aa13.22□□□□□ -0.29
SLC3A2-217ENST00000541425 HHIPL1Q96JK4 782 aa13.22□□□□□ -0.29
SLC3A2-217ENST00000541425 CCDC136Q96JN2 1154 aa13.22□□□□□ -0.29
SLC3A2-217ENST00000541425 CSRNP1Q96S65 589 aa13.22□□□□□ -0.29
SLC3A2-217ENST00000541425 DDX4Q9NQI0 724 aaKnown RBP13.22□□□□□ -0.29
SLC3A2-217ENST00000541425 STAP2Q9UGK3 403 aa13.22□□□□□ -0.29
SLC3A2-217ENST00000541425 SSC5DA1L4H1 1573 aa13.22□□□□□ -0.29
SLC3A2-217ENST00000541425 MYH1P12882 1939 aa13.21□□□□□ -0.29
SLC3A2-217ENST00000541425 NAV1Q8NEY1 1877 aa13.21□□□□□ -0.29
SLC3A2-217ENST00000541425 SLFNL1Q499Z3 407 aa13.21□□□□□ -0.29
SLC3A2-217ENST00000541425 MAPKAPK5Q8IW41 473 aa13.21□□□□□ -0.29
SLC3A2-217ENST00000541425 RILPL2Q969X0 211 aa13.21□□□□□ -0.29
SLC3A2-217ENST00000541425 CRNKL1Q9BZJ0 848 aaKnown RBP13.21□□□□□ -0.29
SLC3A2-217ENST00000541425 OSBPL5Q9H0X9 879 aaPredicted RBP13.21□□□□□ -0.29
SLC3A2-217ENST00000541425 OTOFQ9HC10 1997 aa13.21□□□□□ -0.29
SLC3A2-217ENST00000541425 RFX7Q2KHR2 1363 aa13.2□□□□□ -0.3
SLC3A2-217ENST00000541425 TCRBV5S4A2TA0A5A2 114 aa13.2□□□□□ -0.3
SLC3A2-217ENST00000541425 USP2O75604 605 aaPredicted RBP13.2□□□□□ -0.3
SLC3A2-217ENST00000541425 MBD4O95243 580 aa13.2□□□□□ -0.3
SLC3A2-217ENST00000541425 ZFYP08048 801 aaPredicted RBP13.2□□□□□ -0.3
SLC3A2-217ENST00000541425 UBE3CQ15386 1083 aa13.2□□□□□ -0.3
SLC3A2-217ENST00000541425 PLEKHM2Q8IWE5 1019 aa13.2□□□□□ -0.3
SLC3A2-217ENST00000541425 ANKRD13AQ8IZ07 590 aa13.2□□□□□ -0.3
SLC3A2-217ENST00000541425 CCDC102AQ96A19 550 aa13.2□□□□□ -0.3
SLC3A2-217ENST00000541425 AIDAQ96BJ3 306 aa13.2□□□□□ -0.3
SLC3A2-217ENST00000541425 EVI5LQ96CN4 794 aa13.2□□□□□ -0.3
SLC3A2-217ENST00000541425 ZNF341Q9BYN7 854 aa13.2□□□□□ -0.3
SLC3A2-217ENST00000541425 ARMT1Q9H993 441 aa13.2□□□□□ -0.3
SLC3A2-217ENST00000541425 SAP30BPQ9UHR5 308 aaKnown RBP13.2□□□□□ -0.3
SLC3A2-217ENST00000541425 CSADQ9Y600 493 aa13.2□□□□□ -0.3
SLC3A2-217ENST00000541425 FLT1P17948 1338 aa13.19□□□□□ -0.3
SLC3A2-217ENST00000541425 DDTLA6NHG4 134 aaPredicted RBP13.19□□□□□ -0.3
SLC3A2-217ENST00000541425 RNF113AO15541 343 aaKnown RBP13.19□□□□□ -0.3
SLC3A2-217ENST00000541425 NPM3O75607 178 aaKnown RBP13.19□□□□□ -0.3
SLC3A2-217ENST00000541425 CHGBP05060 677 aa13.19□□□□□ -0.3
SLC3A2-217ENST00000541425 SLC4A8Q2Y0W8 1093 aa13.19□□□□□ -0.3
SLC3A2-217ENST00000541425 CENPQQ7L2Z9 268 aaPredicted RBP13.19□□□□□ -0.3
SLC3A2-217ENST00000541425 LCORLQ8N3X6 602 aa13.19□□□□□ -0.3
SLC3A2-217ENST00000541425 SLC10A4Q96EP9 437 aa13.19□□□□□ -0.3
SLC3A2-217ENST00000541425 WRNIP1Q96S55 665 aa13.19□□□□□ -0.3
SLC3A2-217ENST00000541425 RIOK1Q9BRS2 568 aaKnown RBP13.19□□□□□ -0.3
SLC3A2-217ENST00000541425 TRIM34Q9BYJ4 488 aa13.19□□□□□ -0.3
SLC3A2-217ENST00000541425 AOC2O75106 756 aa13.18□□□□□ -0.3
SLC3A2-217ENST00000541425 HLA-DOAP06340 250 aa13.18□□□□□ -0.3
SLC3A2-217ENST00000541425 MAP3K9P80192 1104 aa13.18□□□□□ -0.3
SLC3A2-217ENST00000541425 MKRN3Q13064 507 aaKnown RBP13.18□□□□□ -0.3
SLC3A2-217ENST00000541425 MAP3K11Q16584 847 aa13.18□□□□□ -0.3
SLC3A2-217ENST00000541425 SH3BP5LQ7L8J4 393 aa13.18□□□□□ -0.3
SLC3A2-217ENST00000541425 CRACR2BQ8N4Y2 399 aaPredicted RBP13.18□□□□□ -0.3
SLC3A2-217ENST00000541425 APPBP2Q92624 585 aa13.18□□□□□ -0.3
SLC3A2-217ENST00000541425 DDRGK1Q96HY6 314 aa13.18□□□□□ -0.3
SLC3A2-217ENST00000541425 CLMNQ96JQ2 1002 aa13.18□□□□□ -0.3
SLC3A2-217ENST00000541425 DHX36Q9H2U1 1008 aaKnown RBP13.18□□□□□ -0.3
SLC3A2-217ENST00000541425 COL2A1P02458 1487 aaPredicted RBP13.17□□□□□ -0.3
SLC3A2-217ENST00000541425 POLR3DP05423 398 aaPredicted RBP13.17□□□□□ -0.3
SLC3A2-217ENST00000541425 PDE4AP27815 886 aa13.17□□□□□ -0.3
SLC3A2-217ENST00000541425 NOGQ13253 232 aa13.17□□□□□ -0.3
SLC3A2-217ENST00000541425 LDLRAD1Q5T700 205 aa13.17□□□□□ -0.3
SLC3A2-217ENST00000541425 RASAL3Q86YV0 1011 aa13.17□□□□□ -0.3
SLC3A2-217ENST00000541425 SDR42E1Q8WUS8 393 aa13.17□□□□□ -0.3
SLC3A2-217ENST00000541425 PUS7LQ9H0K6 701 aaKnown RBP13.17□□□□□ -0.3
SLC3A2-217ENST00000541425 OSBPL3Q9H4L5 887 aa13.17□□□□□ -0.3
SLC3A2-217ENST00000541425 ELP3Q9H9T3 547 aa13.17□□□□□ -0.3
SLC3A2-217ENST00000541425 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.17□□□□□ -0.3
SLC3A2-217ENST00000541425 PI4KBQ9UBF8 816 aa13.17□□□□□ -0.3
SLC3A2-217ENST00000541425 PALD1Q9ULE6 856 aa13.17□□□□□ -0.3
SLC3A2-217ENST00000541425 SLC4A4Q9Y6R1 1079 aa13.17□□□□□ -0.3
SLC3A2-217ENST00000541425 ATRNL1Q5VV63 1379 aa13.17□□□□□ -0.3
SLC3A2-217ENST00000541425 BAZ2AQ9UIF9 1905 aaKnown RBP13.16□□□□□ -0.3
SLC3A2-217ENST00000541425 UNCXA6NJT0 531 aa13.16□□□□□ -0.3
SLC3A2-217ENST00000541425 FAM196BA6NMK8 535 aa13.16□□□□□ -0.3
SLC3A2-217ENST00000541425 SLC10A3P09131 477 aa13.16□□□□□ -0.3
SLC3A2-217ENST00000541425 VGLL4Q14135 290 aa13.16□□□□□ -0.3
SLC3A2-217ENST00000541425 AMOTL1Q8IY63 956 aa13.16□□□□□ -0.3
SLC3A2-217ENST00000541425 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.16□□□□□ -0.33e-10■■□□□ 11.9
SLC3A2-217ENST00000541425 ZKSCAN4Q969J2 545 aaPredicted RBP13.16□□□□□ -0.3
SLC3A2-217ENST00000541425 MCM9Q9NXL9 1143 aa13.16□□□□□ -0.3
SLC3A2-217ENST00000541425 ATAD5Q96QE3 1844 aa13.16□□□□□ -0.3
SLC3A2-217ENST00000541425 THSD7BQ9C0I4 1608 aa13.15□□□□□ -0.3
SLC3A2-217ENST00000541425 FAM155AB1AL88 458 aaPredicted RBP13.15□□□□□ -0.3
SLC3A2-217ENST00000541425 PRKAB2O43741 272 aa13.15□□□□□ -0.3
SLC3A2-217ENST00000541425 APPP05067 770 aa13.15□□□□□ -0.3
SLC3A2-217ENST00000541425 MAP2K2P36507 400 aa13.15□□□□□ -0.3
SLC3A2-217ENST00000541425 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.15□□□□□ -0.3
SLC3A2-217ENST00000541425 TTC6Q86TZ1 520 aa13.15□□□□□ -0.3
SLC3A2-217ENST00000541425 OSBP2Q969R2 916 aa13.15□□□□□ -0.3
SLC3A2-217ENST00000541425 OPTNQ96CV9 577 aa13.15□□□□□ -0.3
SLC3A2-217ENST00000541425 BEGAINQ9BUH8 593 aa13.15□□□□□ -0.3
SLC3A2-217ENST00000541425 SIPA1L1O43166 1804 aa13.15□□□□□ -0.3
SLC3A2-217ENST00000541425 DOCK1Q14185 1865 aa13.14□□□□□ -0.31
SLC3A2-217ENST00000541425 DDX60LQ5H9U9 1706 aaKnown RBP13.14□□□□□ -0.31
SLC3A2-217ENST00000541425 MYH8P13535 1937 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms