RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 NIP7Q9Y221 180 aaKnown RBP eCLIP11.97□□□□□ -0.49
LMO3-224ENST00000540848 SLC27A5Q9Y2P5 690 aa11.97□□□□□ -0.49
LMO3-224ENST00000540848 E7EWF7 191 aa11.96□□□□□ -0.49
LMO3-224ENST00000540848 M0R2C6 588 aa11.96□□□□□ -0.49
LMO3-224ENST00000540848 IRF6O14896 467 aa11.96□□□□□ -0.49
LMO3-224ENST00000540848 PFKFB2O60825 505 aa11.96□□□□□ -0.49
LMO3-224ENST00000540848 ADD2P35612 726 aa11.96□□□□□ -0.49
LMO3-224ENST00000540848 EXOSC10Q01780 885 aaKnown RBP11.96□□□□□ -0.49
LMO3-224ENST00000540848 ST3GAL1Q11201 340 aa11.96□□□□□ -0.49
LMO3-224ENST00000540848 FOXD4L5Q5VV16 416 aaPredicted RBP11.96□□□□□ -0.49
LMO3-224ENST00000540848 CCDC102BQ68D86 513 aa11.96□□□□□ -0.49
LMO3-224ENST00000540848 Q6ZUG5 572 aa11.96□□□□□ -0.49
LMO3-224ENST00000540848 RGS22Q8NE09 1264 aa11.96□□□□□ -0.49
LMO3-224ENST00000540848 FOXD4L4Q8WXT5 416 aaPredicted RBP11.96□□□□□ -0.49
LMO3-224ENST00000540848 BRPF3Q9ULD4 1205 aa11.96□□□□□ -0.49
LMO3-224ENST00000540848 ELP1O95163 1332 aa11.96□□□□□ -0.5
LMO3-224ENST00000540848 EVCP57679 992 aa11.96□□□□□ -0.5
LMO3-224ENST00000540848 LRSAM1Q6UWE0 723 aa11.96□□□□□ -0.5
LMO3-224ENST00000540848 USP48Q86UV5 1035 aa11.96□□□□□ -0.5
LMO3-224ENST00000540848 SULF1Q8IWU6 871 aa11.96□□□□□ -0.5
LMO3-224ENST00000540848 NYXQ9GZU5 481 aa11.96□□□□□ -0.5
LMO3-224ENST00000540848 DOCK2Q92608 1830 aa11.96□□□□□ -0.5
LMO3-224ENST00000540848 GPAA1O43292 621 aa11.95□□□□□ -0.5
LMO3-224ENST00000540848 HMGB2P26583 209 aaKnown RBP11.95□□□□□ -0.5
LMO3-224ENST00000540848 KRT85P78386 507 aa11.95□□□□□ -0.5
LMO3-224ENST00000540848 MAP3K12Q12852 859 aa11.95□□□□□ -0.5
LMO3-224ENST00000540848 SCARF1Q14162 830 aa11.95□□□□□ -0.5
LMO3-224ENST00000540848 SF3B3Q15393 1217 aaKnown RBP11.95□□□□□ -0.5
LMO3-224ENST00000540848 ALX1Q15699 326 aa11.95□□□□□ -0.5
LMO3-224ENST00000540848 FAM160A2Q8N612 972 aaPredicted RBP11.95□□□□□ -0.5
LMO3-224ENST00000540848 NECAB1Q8N987 351 aa11.95□□□□□ -0.5
LMO3-224ENST00000540848 C8orf37Q96NL8 207 aa11.95□□□□□ -0.5
LMO3-224ENST00000540848 ZSCAN16Q9H4T2 348 aaPredicted RBP11.95□□□□□ -0.5
LMO3-224ENST00000540848 TAF6LQ9Y6J9 622 aa11.95□□□□□ -0.5
LMO3-224ENST00000540848 TCHHQ07283 1943 aa11.95□□□□□ -0.5
LMO3-224ENST00000540848 CARMIL3Q8ND23 1372 aa11.94□□□□□ -0.5
LMO3-224ENST00000540848 VPS37CA5D8V6 355 aaPredicted RBP11.94□□□□□ -0.5
LMO3-224ENST00000540848 DHX16O60231 1041 aaKnown RBP11.94□□□□□ -0.5
LMO3-224ENST00000540848 HCLS1P14317 486 aaPredicted RBP11.94□□□□□ -0.5
LMO3-224ENST00000540848 MCM5P33992 734 aa11.94□□□□□ -0.5
LMO3-224ENST00000540848 NASPP49321 788 aaPredicted RBP11.94□□□□□ -0.5
LMO3-224ENST00000540848 CCDC173Q0VFZ6 552 aa11.94□□□□□ -0.5
LMO3-224ENST00000540848 SLC10A5Q5PT55 438 aa11.94□□□□□ -0.5
LMO3-224ENST00000540848 TMED8Q6PL24 325 aaPredicted RBP11.94□□□□□ -0.5
LMO3-224ENST00000540848 STOX1Q6ZVD7 989 aa11.94□□□□□ -0.5
LMO3-224ENST00000540848 GAS2L3Q86XJ1 694 aa11.94□□□□□ -0.5
LMO3-224ENST00000540848 SMARCC2Q8TAQ2 1214 aa11.94□□□□□ -0.5
LMO3-224ENST00000540848 BRF1Q92994 677 aa11.94□□□□□ -0.5
LMO3-224ENST00000540848 SCAND2PQ9GZW5 306 aaPredicted RBP11.94□□□□□ -0.5
LMO3-224ENST00000540848 COL24A1Q17RW2 1714 aa11.94□□□□□ -0.5
LMO3-224ENST00000540848 BTAF1O14981 1849 aa11.93□□□□□ -0.5
LMO3-224ENST00000540848 RPS6KA4O75676 772 aa11.93□□□□□ -0.5
LMO3-224ENST00000540848 FGAP02671 866 aa11.93□□□□□ -0.5
LMO3-224ENST00000540848 CD46P15529 392 aa11.93□□□□□ -0.5
LMO3-224ENST00000540848 GNAT2P19087 354 aa11.93□□□□□ -0.5
LMO3-224ENST00000540848 CCDC183Q5T5S1 534 aa11.93□□□□□ -0.5
LMO3-224ENST00000540848 SLC9C2Q5TAH2 1124 aa11.93□□□□□ -0.5
LMO3-224ENST00000540848 ATL3Q6DD88 541 aa11.93□□□□□ -0.5
LMO3-224ENST00000540848 NAA16Q6N069 864 aaPredicted RBP11.93□□□□□ -0.5
LMO3-224ENST00000540848 ZNF598Q86UK7 904 aaKnown RBP11.93□□□□□ -0.5
LMO3-224ENST00000540848 FAM43AQ8N2R8 423 aa11.93□□□□□ -0.5
LMO3-224ENST00000540848 SPATA5Q8NB90 893 aa11.93□□□□□ -0.5
LMO3-224ENST00000540848 LINC00116Q8NCU8 138 aa11.93□□□□□ -0.5
LMO3-224ENST00000540848 NCOA7Q8NI08 942 aa11.93□□□□□ -0.5
LMO3-224ENST00000540848 TMEM63CQ9P1W3 806 aa11.93□□□□□ -0.5
LMO3-224ENST00000540848 ZNF213O14771 459 aa11.92□□□□□ -0.5
LMO3-224ENST00000540848 KCNQ2O43526 872 aa11.92□□□□□ -0.5
LMO3-224ENST00000540848 IGSF3O75054 1194 aa11.92□□□□□ -0.5
LMO3-224ENST00000540848 CHGBP05060 677 aa11.92□□□□□ -0.5
LMO3-224ENST00000540848 PDE6AP16499 860 aa11.92□□□□□ -0.5
LMO3-224ENST00000540848 PHKA1P46020 1223 aa11.92□□□□□ -0.5
LMO3-224ENST00000540848 TRDNQ13061 729 aa11.92□□□□□ -0.5
LMO3-224ENST00000540848 UBE4AQ14139 1066 aa11.92□□□□□ -0.5
LMO3-224ENST00000540848 RALYLQ86SE5 291 aaKnown RBP11.92□□□□□ -0.5
LMO3-224ENST00000540848 FAM184AQ8NB25 1140 aa11.92□□□□□ -0.5
LMO3-224ENST00000540848 TCEANC2Q96MN5 208 aa11.92□□□□□ -0.5
LMO3-224ENST00000540848 PUS7LQ9H0K6 701 aaKnown RBP11.92□□□□□ -0.5
LMO3-224ENST00000540848 GNL3LQ9NVN8 582 aaKnown RBP11.92□□□□□ -0.5
LMO3-224ENST00000540848 NARFQ9UHQ1 456 aa11.92□□□□□ -0.5
LMO3-224ENST00000540848 USP21Q9UK80 565 aa11.92□□□□□ -0.5
LMO3-224ENST00000540848 CNPY2Q9Y2B0 182 aa11.92□□□□□ -0.5
LMO3-224ENST00000540848 IDH1O75874 414 aaKnown RBP11.92□□□□□ -0.5
LMO3-224ENST00000540848 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.92□□□□□ -0.5
LMO3-224ENST00000540848 ANKRD18AQ8IVF6 992 aa11.92□□□□□ -0.5
LMO3-224ENST00000540848 BSDC1Q9NW68 430 aaPredicted RBP11.92□□□□□ -0.5
LMO3-224ENST00000540848 LY75O60449 1722 aa11.91□□□□□ -0.5
LMO3-224ENST00000540848 ZNF532Q9HCE3 1301 aa11.91□□□□□ -0.5
LMO3-224ENST00000540848 TCRBV5S4A2TA0A5A2 114 aa11.91□□□□□ -0.5
LMO3-224ENST00000540848 H3BQV1 296 aa11.91□□□□□ -0.5
LMO3-224ENST00000540848 FOXP2O15409 715 aa11.91□□□□□ -0.5
LMO3-224ENST00000540848 MDM2Q00987 491 aaPredicted RBP11.91□□□□□ -0.5
LMO3-224ENST00000540848 SCRN1Q12765 414 aa11.91□□□□□ -0.5
LMO3-224ENST00000540848 BRICD5Q6PL45 260 aa11.91□□□□□ -0.5
LMO3-224ENST00000540848 RNF19BQ6ZMZ0 732 aa11.91□□□□□ -0.5
LMO3-224ENST00000540848 MB21D2Q8IYB1 491 aaPredicted RBP11.91□□□□□ -0.5
LMO3-224ENST00000540848 CCDC102AQ96A19 550 aa11.91□□□□□ -0.5
LMO3-224ENST00000540848 AIDAQ96BJ3 306 aa11.91□□□□□ -0.5
LMO3-224ENST00000540848 PPP1R9BQ96SB3 815 aa11.91□□□□□ -0.5
LMO3-224ENST00000540848 PIH1D3Q9NQM4 214 aaKnown RBP11.91□□□□□ -0.5
LMO3-224ENST00000540848 PRDM9Q9NQV7 894 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 191.2 ms