RNA–Protein interactions for RNA: ENST00000540803.1

RAB35-204, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 2

Gene RAB35, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-204ENST00000540803 NAA16Q6N069 864 aaPredicted RBP23.41■■□□□ 1.34
RAB35-204ENST00000540803 IFNL1Q8IU54 200 aa23.41■■□□□ 1.34
RAB35-204ENST00000540803 ZNF112Q9UJU3 913 aa23.41■■□□□ 1.34
RAB35-204ENST00000540803 NDUFB9Q9Y6M9 179 aa23.41■■□□□ 1.34
RAB35-204ENST00000540803 FOCADQ5VW36 1801 aa23.4■■□□□ 1.34
RAB35-204ENST00000540803 TESPA1A2RU30 521 aaPredicted RBP23.4■■□□□ 1.34
RAB35-204ENST00000540803 DDTLA6NHG4 134 aaPredicted RBP23.4■■□□□ 1.34
RAB35-204ENST00000540803 SPDYE5A6NIY4 337 aa23.4■■□□□ 1.34
RAB35-204ENST00000540803 MAP4K4O95819 1239 aaPredicted RBP23.4■■□□□ 1.34
RAB35-204ENST00000540803 INPP5BP32019 993 aa23.4■■□□□ 1.34
RAB35-204ENST00000540803 RRP1P56182 461 aaKnown RBP23.4■■□□□ 1.34
RAB35-204ENST00000540803 OTUD5Q96G74 571 aa23.4■■□□□ 1.34
RAB35-204ENST00000540803 MS4A4AQ96JQ5 239 aa23.4■■□□□ 1.34
RAB35-204ENST00000540803 CFHR5Q9BXR6 569 aa23.4■■□□□ 1.34
RAB35-204ENST00000540803 IGSF3O75054 1194 aa23.39■■□□□ 1.33
RAB35-204ENST00000540803 NPM3O75607 178 aaKnown RBP23.39■■□□□ 1.33
RAB35-204ENST00000540803 ADGRA1Q86SQ6 560 aa23.39■■□□□ 1.33
RAB35-204ENST00000540803 R3HDMLQ9H3Y0 253 aa23.39■■□□□ 1.33
RAB35-204ENST00000540803 CAPN15O75808 1086 aa23.38■■□□□ 1.33
RAB35-204ENST00000540803 ALDH1A1P00352 501 aa23.38■■□□□ 1.33
RAB35-204ENST00000540803 ERO1BQ86YB8 467 aa23.38■■□□□ 1.33
RAB35-204ENST00000540803 ZSCAN29Q8IWY8 852 aaPredicted RBP23.38■■□□□ 1.33
RAB35-204ENST00000540803 PTPN18Q99952 460 aa23.38■■□□□ 1.33
RAB35-204ENST00000540803 ANTXR1Q9H6X2 564 aa23.38■■□□□ 1.33
RAB35-204ENST00000540803 AATFQ9NY61 560 aaKnown RBP eCLIP23.38■■□□□ 1.33
RAB35-204ENST00000540803 IFIT2P09913 472 aaKnown RBP23.37■■□□□ 1.33
RAB35-204ENST00000540803 TEX11Q8IYF3 940 aa23.37■■□□□ 1.33
RAB35-204ENST00000540803 SH3RF3Q8TEJ3 882 aaPredicted RBP23.37■■□□□ 1.33
RAB35-204ENST00000540803 COL2A1P02458 1487 aaPredicted RBP23.36■■□□□ 1.33
RAB35-204ENST00000540803 PHF20L1A8MW92 1017 aa23.36■■□□□ 1.33
RAB35-204ENST00000540803 IDH1O75874 414 aaKnown RBP23.36■■□□□ 1.33
RAB35-204ENST00000540803 SLURP2P0DP57 97 aa23.36■■□□□ 1.33
RAB35-204ENST00000540803 PPP4CP60510 307 aa23.36■■□□□ 1.33
RAB35-204ENST00000540803 MAP3K10Q02779 954 aa23.36■■□□□ 1.33
RAB35-204ENST00000540803 NOM1Q5C9Z4 860 aaKnown RBP23.36■■□□□ 1.33
RAB35-204ENST00000540803 ZNF296Q8WUU4 475 aaPredicted RBP23.36■■□□□ 1.33
RAB35-204ENST00000540803 BRI3BPQ8WY22 251 aa23.36■■□□□ 1.33
RAB35-204ENST00000540803 NOL10Q9BSC4 688 aaKnown RBP23.36■■□□□ 1.33
RAB35-204ENST00000540803 MCOLN1Q9GZU1 580 aa23.36■■□□□ 1.33
RAB35-204ENST00000540803 BCL11AQ9H165 835 aa23.36■■□□□ 1.33
RAB35-204ENST00000540803 DOCK1Q14185 1865 aa23.35■■□□□ 1.33
RAB35-204ENST00000540803 GPR25O00155 361 aa23.35■■□□□ 1.33
RAB35-204ENST00000540803 BAG3O95817 575 aa23.35■■□□□ 1.33
RAB35-204ENST00000540803 GTF2A2P52657 109 aa23.35■■□□□ 1.33
RAB35-204ENST00000540803 PPIL2Q13356 520 aa23.35■■□□□ 1.33
RAB35-204ENST00000540803 DGKZQ13574 1117 aa23.35■■□□□ 1.33
RAB35-204ENST00000540803 NOL9Q5SY16 702 aaKnown RBP23.35■■□□□ 1.33
RAB35-204ENST00000540803 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.35■■□□□ 1.33
RAB35-204ENST00000540803 ABHD8Q96I13 439 aa23.35■■□□□ 1.33
RAB35-204ENST00000540803 OSBPL5Q9H0X9 879 aaPredicted RBP23.35■■□□□ 1.33
RAB35-204ENST00000540803 SIPA1L1O43166 1804 aa23.35■■□□□ 1.33
RAB35-204ENST00000540803 CCL15-CCL14A0A0B4J2E2 113 aa23.34■■□□□ 1.33
RAB35-204ENST00000540803 IRF6O14896 467 aa23.34■■□□□ 1.33
RAB35-204ENST00000540803 PPATQ06203 517 aa23.34■■□□□ 1.33
RAB35-204ENST00000540803 CCL15Q16663 113 aa23.34■■□□□ 1.33
RAB35-204ENST00000540803 PLCG2P16885 1265 aa23.33■■□□□ 1.33
RAB35-204ENST00000540803 CYP7A1P22680 504 aa23.33■■□□□ 1.33
RAB35-204ENST00000540803 OTUD7BQ6GQQ9 843 aa23.33■■□□□ 1.33
RAB35-204ENST00000540803 MAGEB6Q8N7X4 407 aa23.33■■□□□ 1.33
RAB35-204ENST00000540803 LRRCC1Q9C099 1032 aa23.33■■□□□ 1.33
RAB35-204ENST00000540803 PHIPQ8WWQ0 1821 aa23.32■■□□□ 1.32
RAB35-204ENST00000540803 SMARCA5O60264 1052 aaPredicted RBP23.32■■□□□ 1.32
RAB35-204ENST00000540803 DCTPP1Q9H773 170 aa23.32■■□□□ 1.32
RAB35-204ENST00000540803 PCDHB15Q9Y5E8 787 aa23.32■■□□□ 1.32
RAB35-204ENST00000540803 ATAD5Q96QE3 1844 aa23.31■■□□□ 1.32
RAB35-204ENST00000540803 TBC1D12O60347 775 aa23.31■■□□□ 1.32
RAB35-204ENST00000540803 DYNLL1P63167 89 aaKnown RBP23.31■■□□□ 1.32
RAB35-204ENST00000540803 MAP3K12Q12852 859 aa23.31■■□□□ 1.32
RAB35-204ENST00000540803 CRHR2Q13324 411 aa23.31■■□□□ 1.32
RAB35-204ENST00000540803 SNAPC2Q13487 334 aa23.31■■□□□ 1.32
RAB35-204ENST00000540803 TGFBRAP1Q8WUH2 860 aa23.31■■□□□ 1.32
RAB35-204ENST00000540803 MYH1P12882 1939 aa23.3■■□□□ 1.32
RAB35-204ENST00000540803 CETPP11597 493 aa23.3■■□□□ 1.32
RAB35-204ENST00000540803 TTF1Q15361 905 aaPredicted RBP23.3■■□□□ 1.32
RAB35-204ENST00000540803 CTU1Q7Z7A3 348 aaKnown RBP23.3■■□□□ 1.32
RAB35-204ENST00000540803 SCYL3Q8IZE3 742 aa23.3■■□□□ 1.32
RAB35-204ENST00000540803 FAM43AQ8N2R8 423 aa23.3■■□□□ 1.32
RAB35-204ENST00000540803 MIGA1Q8NAN2 632 aa23.3■■□□□ 1.32
RAB35-204ENST00000540803 DNAJC2Q99543 621 aaKnown RBP23.3■■□□□ 1.32
RAB35-204ENST00000540803 FLT1P17948 1338 aa23.3■■□□□ 1.32
RAB35-204ENST00000540803 PTPRFP10586 1907 aa23.29■■□□□ 1.32
RAB35-204ENST00000540803 FAM196BA6NMK8 535 aa23.29■■□□□ 1.32
RAB35-204ENST00000540803 GOLIM4O00461 696 aa23.29■■□□□ 1.32
RAB35-204ENST00000540803 FKTNO75072 461 aa23.29■■□□□ 1.32
RAB35-204ENST00000540803 ATP5JP18859 108 aa23.29■■□□□ 1.32
RAB35-204ENST00000540803 TMED8Q6PL24 325 aaPredicted RBP23.29■■□□□ 1.32
RAB35-204ENST00000540803 MAPKAPK5Q8IW41 473 aa23.29■■□□□ 1.32
RAB35-204ENST00000540803 CRBNQ96SW2 442 aa23.29■■□□□ 1.32
RAB35-204ENST00000540803 KCNH4Q9UQ05 1017 aa23.29■■□□□ 1.32
RAB35-204ENST00000540803 MYH7P12883 1935 aa23.29■■□□□ 1.32
RAB35-204ENST00000540803 EDC3Q96F86 508 aaKnown RBP23.28■■□□□ 1.32
RAB35-204ENST00000540803 BOLA2Q9H3K6 86 aa23.28■■□□□ 1.32
RAB35-204ENST00000540803 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.28■■□□□ 1.32
RAB35-204ENST00000540803 BTBD19C9JJ37 291 aa23.27■■□□□ 1.32
RAB35-204ENST00000540803 CTNND1O60716 968 aaKnown RBP23.27■■□□□ 1.32
RAB35-204ENST00000540803 DHX36Q9H2U1 1008 aaKnown RBP23.27■■□□□ 1.32
RAB35-204ENST00000540803 PICK1Q9NRD5 415 aa23.27■■□□□ 1.32
RAB35-204ENST00000540803 PDE6AP16499 860 aa23.26■■□□□ 1.31
RAB35-204ENST00000540803 PTPRAP18433 802 aa23.26■■□□□ 1.31
RAB35-204ENST00000540803 TAF1CQ15572 869 aaPredicted RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms