RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 CLASRPQ8N2M8 674 aaKnown RBP20.97■□□□□ 0.95
CACNA2D4-211ENST00000540728 ZKSCAN4Q969J2 545 aaPredicted RBP20.97■□□□□ 0.95
CACNA2D4-211ENST00000540728 KIF1BPQ96EK5 621 aa20.97■□□□□ 0.95
CACNA2D4-211ENST00000540728 TLR7Q9NYK1 1049 aaKnown RBP20.97■□□□□ 0.95
CACNA2D4-211ENST00000540728 SNCAIPQ9Y6H5 919 aa20.97■□□□□ 0.95
CACNA2D4-211ENST00000540728 CCL15-CCL14A0A0B4J2E2 113 aa20.96■□□□□ 0.95
CACNA2D4-211ENST00000540728 APBB1O00213 710 aa20.96■□□□□ 0.95
CACNA2D4-211ENST00000540728 RAB11FIP3O75154 756 aa20.96■□□□□ 0.95
CACNA2D4-211ENST00000540728 WDHD1O75717 1129 aaPredicted RBP20.96■□□□□ 0.95
CACNA2D4-211ENST00000540728 BAG3O95817 575 aa20.96■□□□□ 0.95
CACNA2D4-211ENST00000540728 CYP2E1P05181 493 aaPredicted RBP20.96■□□□□ 0.95
CACNA2D4-211ENST00000540728 ZAP70P43403 619 aa20.96■□□□□ 0.95
CACNA2D4-211ENST00000540728 CRHR2Q13324 411 aa20.96■□□□□ 0.95
CACNA2D4-211ENST00000540728 CCL15Q16663 113 aa20.96■□□□□ 0.95
CACNA2D4-211ENST00000540728 ZFPM1Q8IX07 1006 aa20.96■□□□□ 0.95
CACNA2D4-211ENST00000540728 ZNF384Q8TF68 577 aa20.96■□□□□ 0.95
CACNA2D4-211ENST00000540728 IL1RAPL2Q9NP60 686 aa20.96■□□□□ 0.95
CACNA2D4-211ENST00000540728 TESPA1A2RU30 521 aaPredicted RBP20.95■□□□□ 0.94
CACNA2D4-211ENST00000540728 NPM3O75607 178 aaKnown RBP20.95■□□□□ 0.94
CACNA2D4-211ENST00000540728 RHBDL3P58872 404 aa20.95■□□□□ 0.94
CACNA2D4-211ENST00000540728 PKN2Q16513 984 aaKnown RBP20.95■□□□□ 0.94
CACNA2D4-211ENST00000540728 ZNF112Q9UJU3 913 aa20.95■□□□□ 0.94
CACNA2D4-211ENST00000540728 PLCG2P16885 1265 aa20.94■□□□□ 0.94
CACNA2D4-211ENST00000540728 INPP5BP32019 993 aa20.94■□□□□ 0.94
CACNA2D4-211ENST00000540728 SOX10P56693 466 aa20.94■□□□□ 0.94
CACNA2D4-211ENST00000540728 SIRT2Q8IXJ6 389 aa20.94■□□□□ 0.94
CACNA2D4-211ENST00000540728 BRI3BPQ8WY22 251 aa20.94■□□□□ 0.94
CACNA2D4-211ENST00000540728 MS4A4AQ96JQ5 239 aa20.94■□□□□ 0.94
CACNA2D4-211ENST00000540728 PTPN18Q99952 460 aa20.94■□□□□ 0.94
CACNA2D4-211ENST00000540728 DDX4Q9NQI0 724 aaKnown RBP20.94■□□□□ 0.94
CACNA2D4-211ENST00000540728 HPS5Q9UPZ3 1129 aa20.94■□□□□ 0.94
CACNA2D4-211ENST00000540728 MAST2Q6P0Q8 1798 aa20.94■□□□□ 0.94
CACNA2D4-211ENST00000540728 RFX7Q2KHR2 1363 aa20.94■□□□□ 0.94
CACNA2D4-211ENST00000540728 IFIT2P09913 472 aaKnown RBP20.93■□□□□ 0.94
CACNA2D4-211ENST00000540728 PPATQ06203 517 aa20.93■□□□□ 0.94
CACNA2D4-211ENST00000540728 PPIL2Q13356 520 aa20.93■□□□□ 0.94
CACNA2D4-211ENST00000540728 SNAPC2Q13487 334 aa20.93■□□□□ 0.94
CACNA2D4-211ENST00000540728 TEX11Q8IYF3 940 aa20.93■□□□□ 0.94
CACNA2D4-211ENST00000540728 CETPP11597 493 aa20.92■□□□□ 0.94
CACNA2D4-211ENST00000540728 MLLT1Q03111 559 aaPredicted RBP20.92■□□□□ 0.94
CACNA2D4-211ENST00000540728 TAF1CQ15572 869 aaPredicted RBP20.92■□□□□ 0.94
CACNA2D4-211ENST00000540728 BCL11AQ9H165 835 aa20.92■□□□□ 0.94
CACNA2D4-211ENST00000540728 DDTLA6NHG4 134 aaPredicted RBP20.91■□□□□ 0.94
CACNA2D4-211ENST00000540728 IRF6O14896 467 aa20.91■□□□□ 0.94
CACNA2D4-211ENST00000540728 IDH1O75874 414 aaKnown RBP20.91■□□□□ 0.94
CACNA2D4-211ENST00000540728 NOL9Q5SY16 702 aaKnown RBP20.91■□□□□ 0.94
CACNA2D4-211ENST00000540728 FBXO46Q6PJ61 603 aaPredicted RBP20.91■□□□□ 0.94
CACNA2D4-211ENST00000540728 SH3BP5LQ7L8J4 393 aa20.91■□□□□ 0.94
CACNA2D4-211ENST00000540728 ERO1AQ96HE7 468 aa20.91■□□□□ 0.94
CACNA2D4-211ENST00000540728 YTHDC1Q96MU7 727 aaKnown RBP20.91■□□□□ 0.94
CACNA2D4-211ENST00000540728 PIH1D3Q9NQM4 214 aaKnown RBP20.91■□□□□ 0.94
CACNA2D4-211ENST00000540728 AATFQ9NY61 560 aaKnown RBP eCLIP20.91■□□□□ 0.94
CACNA2D4-211ENST00000540728 TRIM17Q9Y577 477 aa20.91■□□□□ 0.94
CACNA2D4-211ENST00000540728 PPP4CP60510 307 aa20.9■□□□□ 0.94
CACNA2D4-211ENST00000540728 MAP3K12Q12852 859 aa20.9■□□□□ 0.94
CACNA2D4-211ENST00000540728 FAM43AQ8N2R8 423 aa20.9■□□□□ 0.94
CACNA2D4-211ENST00000540728 PICK1Q9NRD5 415 aa20.9■□□□□ 0.94
CACNA2D4-211ENST00000540728 ATRNL1Q5VV63 1379 aa20.89■□□□□ 0.93
CACNA2D4-211ENST00000540728 CYP7A1P22680 504 aa20.89■□□□□ 0.93
CACNA2D4-211ENST00000540728 MAP3K10Q02779 954 aa20.89■□□□□ 0.93
CACNA2D4-211ENST00000540728 TTF1Q15361 905 aaPredicted RBP20.89■□□□□ 0.93
CACNA2D4-211ENST00000540728 TMED8Q6PL24 325 aaPredicted RBP20.89■□□□□ 0.93
CACNA2D4-211ENST00000540728 CERS3Q8IU89 383 aa20.89■□□□□ 0.93
CACNA2D4-211ENST00000540728 CD99L2Q8TCZ2 262 aa20.89■□□□□ 0.93
CACNA2D4-211ENST00000540728 SH3RF3Q8TEJ3 882 aaPredicted RBP20.89■□□□□ 0.93
CACNA2D4-211ENST00000540728 OSBPL5Q9H0X9 879 aaPredicted RBP20.89■□□□□ 0.93
CACNA2D4-211ENST00000540728 ZFYVE28Q9HCC9 887 aa20.89■□□□□ 0.93
CACNA2D4-211ENST00000540728 MYO5AQ9Y4I1 1855 aaKnown RBP20.88■□□□□ 0.93
CACNA2D4-211ENST00000540728 SCYL3Q8IZE3 742 aa20.88■□□□□ 0.93
CACNA2D4-211ENST00000540728 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.88■□□□□ 0.93
CACNA2D4-211ENST00000540728 COL2A1P02458 1487 aaPredicted RBP20.88■□□□□ 0.93
CACNA2D4-211ENST00000540728 PHF20L1A8MW92 1017 aa20.87■□□□□ 0.93
CACNA2D4-211ENST00000540728 TBC1D12O60347 775 aa20.87■□□□□ 0.93
CACNA2D4-211ENST00000540728 CTNND1O60716 968 aaKnown RBP20.87■□□□□ 0.93
CACNA2D4-211ENST00000540728 OTOP1Q7RTM1 612 aa20.87■□□□□ 0.93
CACNA2D4-211ENST00000540728 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.87■□□□□ 0.93
CACNA2D4-211ENST00000540728 DHX36Q9H2U1 1008 aaKnown RBP20.87■□□□□ 0.93
CACNA2D4-211ENST00000540728 ZCCHC17Q9NP64 241 aaKnown RBP20.87■□□□□ 0.93
CACNA2D4-211ENST00000540728 NDUFB9Q9Y6M9 179 aa20.87■□□□□ 0.93
CACNA2D4-211ENST00000540728 DOCK1Q14185 1865 aa20.86■□□□□ 0.93
CACNA2D4-211ENST00000540728 RGS19P49795 217 aa20.86■□□□□ 0.93
CACNA2D4-211ENST00000540728 SP3Q02447 781 aa20.86■□□□□ 0.93
CACNA2D4-211ENST00000540728 ADGRA1Q86SQ6 560 aa20.86■□□□□ 0.93
CACNA2D4-211ENST00000540728 MAGEB6Q8N7X4 407 aa20.86■□□□□ 0.93
CACNA2D4-211ENST00000540728 TGFBRAP1Q8WUH2 860 aa20.86■□□□□ 0.93
CACNA2D4-211ENST00000540728 LRRCC1Q9C099 1032 aa20.86■□□□□ 0.93
CACNA2D4-211ENST00000540728 ANTXR1Q9H6X2 564 aa20.86■□□□□ 0.93
CACNA2D4-211ENST00000540728 KCNH4Q9UQ05 1017 aa20.86■□□□□ 0.93
CACNA2D4-211ENST00000540728 BTBD19C9JJ37 291 aa20.85■□□□□ 0.93
CACNA2D4-211ENST00000540728 PI4KBQ9UBF8 816 aa20.85■□□□□ 0.93
CACNA2D4-211ENST00000540728 ZHX2Q9Y6X8 837 aa20.85■□□□□ 0.93
CACNA2D4-211ENST00000540728 CXCL11O14625 94 aa20.84■□□□□ 0.93
CACNA2D4-211ENST00000540728 PTPRAP18433 802 aa20.84■□□□□ 0.93
CACNA2D4-211ENST00000540728 RRP1P56182 461 aaKnown RBP20.84■□□□□ 0.93
CACNA2D4-211ENST00000540728 MAPKAPK5Q8IW41 473 aa20.84■□□□□ 0.93
CACNA2D4-211ENST00000540728 DNAJC2Q99543 621 aaKnown RBP20.84■□□□□ 0.93
CACNA2D4-211ENST00000540728 EFCC1Q9HA90 598 aa20.84■□□□□ 0.93
CACNA2D4-211ENST00000540728 HERC5Q9UII4 1024 aaKnown RBP20.84■□□□□ 0.93
CACNA2D4-211ENST00000540728 DYNLL1P63167 89 aaKnown RBP20.83■□□□□ 0.93
CACNA2D4-211ENST00000540728 ARHGEF6Q15052 776 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms