RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 GP2P55259 537 aaKnown RBP6.67□□□□□ -1.34
MDM2-227ENST00000540709 CYP27A1Q02318 531 aa6.67□□□□□ -1.34
MDM2-227ENST00000540709 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.67□□□□□ -1.34
MDM2-227ENST00000540709 DUSP9Q99956 384 aaKnown RBP6.67□□□□□ -1.34
MDM2-227ENST00000540709 GSX1Q9H4S2 264 aaPredicted RBP6.67□□□□□ -1.34
MDM2-227ENST00000540709 C1GALT1Q9NS00 363 aa6.67□□□□□ -1.34
MDM2-227ENST00000540709 PPM1HQ9ULR3 514 aa6.67□□□□□ -1.34
MDM2-227ENST00000540709 SYNGAP1Q96PV0 1343 aa6.67□□□□□ -1.34
MDM2-227ENST00000540709 CELA3AP09093 270 aa6.66□□□□□ -1.34
MDM2-227ENST00000540709 FAM87AP0C7U9 286 aa6.66□□□□□ -1.34
MDM2-227ENST00000540709 SPINK2P20155 84 aa6.66□□□□□ -1.34
MDM2-227ENST00000540709 LLGL2Q6P1M3 1020 aa6.66□□□□□ -1.34
MDM2-227ENST00000540709 C12orf40Q86WS4 652 aa6.66□□□□□ -1.34
MDM2-227ENST00000540709 DTX1Q86Y01 620 aa6.66□□□□□ -1.34
MDM2-227ENST00000540709 GATA6Q92908 595 aa6.66□□□□□ -1.34
MDM2-227ENST00000540709 PCDHA4Q9UN74 947 aa6.66□□□□□ -1.34
MDM2-227ENST00000540709 OAS3Q9Y6K5 1087 aaKnown RBP6.66□□□□□ -1.34
MDM2-227ENST00000540709 PRPF40AO75400 957 aaKnown RBP6.65□□□□□ -1.34
MDM2-227ENST00000540709 LMNB1P20700 586 aa6.65□□□□□ -1.34
MDM2-227ENST00000540709 GNA15P30679 374 aa6.65□□□□□ -1.34
MDM2-227ENST00000540709 ZNF252P-AS1Q0IIN9 211 aa6.65□□□□□ -1.34
MDM2-227ENST00000540709 LRRC14Q15048 493 aa6.65□□□□□ -1.34
MDM2-227ENST00000540709 CYP27C1Q4G0S4 372 aa6.65□□□□□ -1.34
MDM2-227ENST00000540709 ZC3H12AQ5D1E8 599 aaKnown RBP6.65□□□□□ -1.34
MDM2-227ENST00000540709 PPM1JQ5JR12 505 aa6.65□□□□□ -1.34
MDM2-227ENST00000540709 PCNX4Q63HM2 1172 aa6.65□□□□□ -1.34
MDM2-227ENST00000540709 OGFOD3Q6PK18 319 aa6.65□□□□□ -1.34
MDM2-227ENST00000540709 SEZ6L2Q6UXD5 910 aa6.65□□□□□ -1.34
MDM2-227ENST00000540709 ELMO3Q96BJ8 720 aa6.65□□□□□ -1.34
MDM2-227ENST00000540709 GZF1Q9H116 711 aaPredicted RBP6.65□□□□□ -1.34
MDM2-227ENST00000540709 PCOLCE2Q9UKZ9 415 aa6.65□□□□□ -1.34
MDM2-227ENST00000540709 PCDHGC5Q9Y5F6 944 aa6.65□□□□□ -1.34
MDM2-227ENST00000540709 IRAK1P51617 712 aa6.64□□□□□ -1.35
MDM2-227ENST00000540709 MAP3K11Q16584 847 aa6.64□□□□□ -1.35
MDM2-227ENST00000540709 CPSF6Q16630 551 aaKnown RBP eCLIP6.64□□□□□ -1.35
MDM2-227ENST00000540709 RASIP1Q5U651 963 aa6.64□□□□□ -1.35
MDM2-227ENST00000540709 ARHGAP27Q6ZUM4 889 aa6.64□□□□□ -1.35
MDM2-227ENST00000540709 ISL2Q96A47 359 aa6.64□□□□□ -1.35
MDM2-227ENST00000540709 FRMD6Q96NE9 622 aa6.64□□□□□ -1.35
MDM2-227ENST00000540709 ZC3H7BQ9UGR2 993 aaKnown RBP6.64□□□□□ -1.35
MDM2-227ENST00000540709 LEFTY1O75610 366 aa6.63□□□□□ -1.35
MDM2-227ENST00000540709 NEFMP07197 916 aa6.63□□□□□ -1.35
MDM2-227ENST00000540709 XPCQ01831 940 aaPredicted RBP6.63□□□□□ -1.35
MDM2-227ENST00000540709 PSMD2Q13200 908 aa6.63□□□□□ -1.35
MDM2-227ENST00000540709 CCDC85BQ15834 202 aaPredicted RBP6.63□□□□□ -1.35
MDM2-227ENST00000540709 CDC37L1Q7L3B6 337 aa6.63□□□□□ -1.35
MDM2-227ENST00000540709 TP53INP2Q8IXH6 220 aa6.63□□□□□ -1.35
MDM2-227ENST00000540709 FAM181AQ8N9Y4 354 aa6.63□□□□□ -1.35
MDM2-227ENST00000540709 RNF214Q8ND24 703 aa6.63□□□□□ -1.35
MDM2-227ENST00000540709 PARP2Q9UGN5 583 aa6.63□□□□□ -1.35
MDM2-227ENST00000540709 CYP8B1Q9UNU6 501 aa6.63□□□□□ -1.35
MDM2-227ENST00000540709 PRAMEF27A3QJZ7 478 aa6.62□□□□□ -1.35
MDM2-227ENST00000540709 TRIM37O94972 964 aa6.62□□□□□ -1.35
MDM2-227ENST00000540709 ERVK-24P63145 666 aa6.62□□□□□ -1.35
MDM2-227ENST00000540709 FGD1P98174 961 aa6.62□□□□□ -1.35
MDM2-227ENST00000540709 MSMPQ1L6U9 139 aa6.62□□□□□ -1.35
MDM2-227ENST00000540709 TTBK2Q6IQ55 1244 aa6.62□□□□□ -1.35
MDM2-227ENST00000540709 TOP6BLQ8N6T0 577 aa6.62□□□□□ -1.35
MDM2-227ENST00000540709 FAM161BQ96MY7 647 aa6.62□□□□□ -1.35
MDM2-227ENST00000540709 BSDC1Q9NW68 430 aaPredicted RBP6.62□□□□□ -1.35
MDM2-227ENST00000540709 CCDC39Q9UFE4 941 aa6.62□□□□□ -1.35
MDM2-227ENST00000540709 AK5Q9Y6K8 562 aa6.62□□□□□ -1.35
MDM2-227ENST00000540709 SV2BQ7L1I2 683 aa6.61□□□□□ -1.35
MDM2-227ENST00000540709 FLCNQ8NFG4 579 aa6.61□□□□□ -1.35
MDM2-227ENST00000540709 KRTAP4-12Q9BQ66 201 aa6.61□□□□□ -1.35
MDM2-227ENST00000540709 PTPN11Q06124 597 aaPredicted RBP6.6□□□□□ -1.35
MDM2-227ENST00000540709 INPP5AQ14642 412 aa6.6□□□□□ -1.35
MDM2-227ENST00000540709 MEI1Q5TIA1 1274 aa6.6□□□□□ -1.35
MDM2-227ENST00000540709 ITIH2P19823 946 aa6.59□□□□□ -1.35
MDM2-227ENST00000540709 COL19A1Q14993 1142 aa6.59□□□□□ -1.35
MDM2-227ENST00000540709 CCDC27Q2M243 656 aa6.59□□□□□ -1.35
MDM2-227ENST00000540709 UBE3DQ7Z6J8 389 aa6.59□□□□□ -1.35
MDM2-227ENST00000540709 VSIG10LQ86VR7 867 aa6.59□□□□□ -1.35
MDM2-227ENST00000540709 ABI1Q8IZP0 508 aa6.59□□□□□ -1.35
MDM2-227ENST00000540709 PLD6Q8N2A8 252 aaKnown RBP6.59□□□□□ -1.35
MDM2-227ENST00000540709 DUSP23Q9BVJ7 150 aa6.59□□□□□ -1.35
MDM2-227ENST00000540709 TAL1P17542 331 aaPredicted RBP6.58□□□□□ -1.36
MDM2-227ENST00000540709 CDK8P49336 464 aa6.58□□□□□ -1.36
MDM2-227ENST00000540709 ETF1P62495 437 aaKnown RBP6.58□□□□□ -1.36
MDM2-227ENST00000540709 BNIP3Q12983 259 aa6.58□□□□□ -1.36
MDM2-227ENST00000540709 SEPT6Q14141 434 aa6.58□□□□□ -1.36
MDM2-227ENST00000540709 LCE3BQ5TA77 95 aa6.58□□□□□ -1.36
MDM2-227ENST00000540709 MCTP1Q6DN14 999 aa6.58□□□□□ -1.36
MDM2-227ENST00000540709 LRFN4Q6PJG9 635 aa6.58□□□□□ -1.36
MDM2-227ENST00000540709 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.58□□□□□ -1.36
MDM2-227ENST00000540709 HDXQ7Z353 690 aa6.58□□□□□ -1.36
MDM2-227ENST00000540709 NPAS4Q8IUM7 802 aa6.58□□□□□ -1.36
MDM2-227ENST00000540709 PLPPR2Q96GM1 343 aa6.58□□□□□ -1.36
MDM2-227ENST00000540709 PCDHB5Q9Y5E4 795 aa6.58□□□□□ -1.36
MDM2-227ENST00000540709 F6X3S4 739 aa6.57□□□□□ -1.36
MDM2-227ENST00000540709 FANCGO15287 622 aa6.57□□□□□ -1.36
MDM2-227ENST00000540709 TAGLNQ01995 201 aaKnown RBP6.57□□□□□ -1.36
MDM2-227ENST00000540709 WIPI1Q5MNZ9 446 aaPredicted RBP6.57□□□□□ -1.36
MDM2-227ENST00000540709 ZBTB37Q5TC79 503 aa6.57□□□□□ -1.36
MDM2-227ENST00000540709 DNAJC14Q6Y2X3 702 aaPredicted RBP6.57□□□□□ -1.36
MDM2-227ENST00000540709 ZNF574Q6ZN55 896 aaPredicted RBP6.57□□□□□ -1.36
MDM2-227ENST00000540709 ZNF507Q8TCN5 953 aa6.57□□□□□ -1.36
MDM2-227ENST00000540709 NETO1Q8TDF5 533 aa6.57□□□□□ -1.36
MDM2-227ENST00000540709 JARID2Q92833 1246 aaPredicted RBP6.57□□□□□ -1.36
MDM2-227ENST00000540709 FBXL18Q96ME1 805 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms