RNA–Protein interactions for RNA: ENST00000540394.5

C1R-206, Transcript of complement C1r, humanhuman

TSL 2

Gene C1R, Length 3,501 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1R-206ENST00000540394 B4E1Z4 1266 aa13.53□□□□□ -0.24
C1R-206ENST00000540394 STK3Q13188 491 aa13.53□□□□□ -0.24
C1R-206ENST00000540394 CCDC83Q8IWF9 413 aa13.53□□□□□ -0.24
C1R-206ENST00000540394 CTNNA3Q9UI47 895 aa13.53□□□□□ -0.24
C1R-206ENST00000540394 APOBRQ0VD83 1088 aa13.53□□□□□ -0.24
C1R-206ENST00000540394 TDO2P48775 406 aa13.53□□□□□ -0.24
C1R-206ENST00000540394 MCM2P49736 904 aa13.53□□□□□ -0.24
C1R-206ENST00000540394 ZNF277Q9NRM2 450 aaPredicted RBP13.53□□□□□ -0.24
C1R-206ENST00000540394 SCNN1DP51172 638 aa13.52□□□□□ -0.24
C1R-206ENST00000540394 RHBDL3P58872 404 aa13.52□□□□□ -0.24
C1R-206ENST00000540394 PRELPP51888 382 aa13.52□□□□□ -0.25
C1R-206ENST00000540394 PLCB2Q00722 1185 aa13.52□□□□□ -0.25
C1R-206ENST00000540394 KIAA2012Q0VF49 1180 aa13.52□□□□□ -0.25
C1R-206ENST00000540394 PPFIA3O75145 1194 aa13.52□□□□□ -0.25
C1R-206ENST00000540394 USP17L8P0C7I0 530 aa13.52□□□□□ -0.25
C1R-206ENST00000540394 GNAT2P19087 354 aa13.52□□□□□ -0.25
C1R-206ENST00000540394 PPARAQ07869 468 aa13.52□□□□□ -0.25
C1R-206ENST00000540394 NFKBIBQ15653 356 aa13.52□□□□□ -0.25
C1R-206ENST00000540394 ZSWIM5Q9P217 1185 aa13.52□□□□□ -0.25
C1R-206ENST00000540394 MINDY4BA8MYZ0 360 aa13.51□□□□□ -0.25
C1R-206ENST00000540394 BTDP43251 543 aa13.51□□□□□ -0.25
C1R-206ENST00000540394 DACT2Q5SW24 774 aa13.51□□□□□ -0.25
C1R-206ENST00000540394 RAB11FIP4Q86YS3 637 aa13.51□□□□□ -0.25
C1R-206ENST00000540394 DAGLAQ9Y4D2 1042 aa13.51□□□□□ -0.25
C1R-206ENST00000540394 MYH8P13535 1937 aa13.51□□□□□ -0.25
C1R-206ENST00000540394 GAKO14976 1311 aa13.51□□□□□ -0.25
C1R-206ENST00000540394 USP17L12C9JPN9 530 aa13.51□□□□□ -0.25
C1R-206ENST00000540394 USP17L21D6R901 530 aa13.51□□□□□ -0.25
C1R-206ENST00000540394 SCRN1Q12765 414 aa13.51□□□□□ -0.25
C1R-206ENST00000540394 RAB3GAP1Q15042 981 aa13.51□□□□□ -0.25
C1R-206ENST00000540394 SPTY2D1Q68D10 685 aaPredicted RBP13.51□□□□□ -0.25
C1R-206ENST00000540394 CHMP5Q9NZZ3 219 aa13.51□□□□□ -0.25
C1R-206ENST00000540394 ZHX1Q9UKY1 873 aaPredicted RBP13.51□□□□□ -0.25
C1R-206ENST00000540394 GPR75-ASB3A0A0A6YYF3 556 aa13.51□□□□□ -0.25
C1R-206ENST00000540394 PRC1O43663 620 aa13.51□□□□□ -0.25
C1R-206ENST00000540394 PRDM1O75626 825 aa13.51□□□□□ -0.25
C1R-206ENST00000540394 TNPO1Q92973 898 aaKnown RBP13.51□□□□□ -0.25
C1R-206ENST00000540394 TGFB2P61812 414 aa13.5□□□□□ -0.25
C1R-206ENST00000540394 ZKSCAN3Q9BRR0 538 aa13.5□□□□□ -0.25
C1R-206ENST00000540394 NCOA5Q9HCD5 579 aaKnown RBP13.5□□□□□ -0.25
C1R-206ENST00000540394 CTDNEP1O95476 244 aa13.5□□□□□ -0.25
C1R-206ENST00000540394 SLURP2P0DP57 97 aa13.5□□□□□ -0.25
C1R-206ENST00000540394 AKNAD1Q5T1N1 836 aa13.5□□□□□ -0.25
C1R-206ENST00000540394 PODNQ7Z5L7 613 aa13.5□□□□□ -0.25
C1R-206ENST00000540394 NCOA7Q8NI08 942 aa13.5□□□□□ -0.25
C1R-206ENST00000540394 TGFBRAP1Q8WUH2 860 aa13.5□□□□□ -0.25
C1R-206ENST00000540394 STAG1Q8WVM7 1258 aa13.5□□□□□ -0.25
C1R-206ENST00000540394 INTS4Q96HW7 963 aaKnown RBP13.5□□□□□ -0.25
C1R-206ENST00000540394 TTF2Q9UNY4 1162 aaKnown RBP13.5□□□□□ -0.25
C1R-206ENST00000540394 KDM4AO75164 1064 aa13.5□□□□□ -0.25
C1R-206ENST00000540394 PLCD1P51178 756 aa13.5□□□□□ -0.25
C1R-206ENST00000540394 PPP4CP60510 307 aa13.5□□□□□ -0.25
C1R-206ENST00000540394 EYA3Q99504 573 aa13.5□□□□□ -0.25
C1R-206ENST00000540394 HPS5Q9UPZ3 1129 aa13.5□□□□□ -0.25
C1R-206ENST00000540394 PPIP5K2O43314 1243 aa13.49□□□□□ -0.25
C1R-206ENST00000540394 JAK2O60674 1132 aa13.49□□□□□ -0.25
C1R-206ENST00000540394 POLD1P28340 1107 aa13.49□□□□□ -0.25
C1R-206ENST00000540394 KIAA0825Q8IV33 1275 aa13.49□□□□□ -0.25
C1R-206ENST00000540394 IGDCC4Q8TDY8 1250 aa13.49□□□□□ -0.25
C1R-206ENST00000540394 PIM2Q9P1W9 311 aa13.49□□□□□ -0.25
C1R-206ENST00000540394 ANAPC4Q9UJX5 808 aa13.49□□□□□ -0.25
C1R-206ENST00000540394 NFKBIEO00221 500 aa13.49□□□□□ -0.25
C1R-206ENST00000540394 MAPKAPK5Q8IW41 473 aa13.49□□□□□ -0.25
C1R-206ENST00000540394 FAM163AQ96GL9 167 aaPredicted RBP13.49□□□□□ -0.25
C1R-206ENST00000540394 DDX4Q9NQI0 724 aaKnown RBP13.49□□□□□ -0.25
C1R-206ENST00000540394 SBF1O95248 1867 aa13.49□□□□□ -0.25
C1R-206ENST00000540394 HMGB1P09429 215 aaKnown RBP13.48□□□□□ -0.25
C1R-206ENST00000540394 CHRM1P11229 460 aaPredicted RBP13.48□□□□□ -0.25
C1R-206ENST00000540394 CCDC93Q567U6 631 aa13.48□□□□□ -0.25
C1R-206ENST00000540394 FOXD4L5Q5VV16 416 aaPredicted RBP13.48□□□□□ -0.25
C1R-206ENST00000540394 FBXL16Q8N461 479 aa13.48□□□□□ -0.25
C1R-206ENST00000540394 TBC1D22AQ8WUA7 517 aa13.48□□□□□ -0.25
C1R-206ENST00000540394 FOXD4L4Q8WXT5 416 aaPredicted RBP13.48□□□□□ -0.25
C1R-206ENST00000540394 GTF3C6Q969F1 213 aa13.48□□□□□ -0.25
C1R-206ENST00000540394 PDIA3P30101 505 aaKnown RBP13.48□□□□□ -0.25
C1R-206ENST00000540394 APOBEC3HQ6NTF7 200 aaKnown RBP13.48□□□□□ -0.25
C1R-206ENST00000540394 DYNLL2Q96FJ2 89 aa13.48□□□□□ -0.25
C1R-206ENST00000540394 PSMD1Q99460 953 aa13.48□□□□□ -0.25
C1R-206ENST00000540394 TMX4Q9H1E5 349 aaPredicted RBP13.48□□□□□ -0.25
C1R-206ENST00000540394 SAP30BPQ9UHR5 308 aaKnown RBP13.48□□□□□ -0.25
C1R-206ENST00000540394 RXRAP19793 462 aa13.48□□□□□ -0.25
C1R-206ENST00000540394 MCM5P33992 734 aa13.48□□□□□ -0.25
C1R-206ENST00000540394 CCT2P78371 535 aaKnown RBP13.48□□□□□ -0.25
C1R-206ENST00000540394 RRP12Q5JTH9 1297 aaKnown RBP13.48□□□□□ -0.25
C1R-206ENST00000540394 NACAP1Q9BZK3 213 aa13.48□□□□□ -0.25
C1R-206ENST00000540394 FLT1P17948 1338 aa13.48□□□□□ -0.25
C1R-206ENST00000540394 MYH15Q9Y2K3 1946 aa13.48□□□□□ -0.25
C1R-206ENST00000540394 NMT2O60551 498 aa13.47□□□□□ -0.25
C1R-206ENST00000540394 EVCP57679 992 aa13.47□□□□□ -0.25
C1R-206ENST00000540394 STRIP1Q5VSL9 837 aa13.47□□□□□ -0.25
C1R-206ENST00000540394 SLC44A5Q8NCS7 719 aa13.47□□□□□ -0.25
C1R-206ENST00000540394 CRNKL1Q9BZJ0 848 aaKnown RBP13.47□□□□□ -0.25
C1R-206ENST00000540394 LY9Q9HBG7 655 aa13.47□□□□□ -0.25
C1R-206ENST00000540394 MCM9Q9NXL9 1143 aa13.47□□□□□ -0.25
C1R-206ENST00000540394 FGRP09769 529 aa13.47□□□□□ -0.25
C1R-206ENST00000540394 ATP8A2Q9NTI2 1148 aa13.47□□□□□ -0.25
C1R-206ENST00000540394 SH2B2O14492 632 aaPredicted RBP13.47□□□□□ -0.25
C1R-206ENST00000540394 WDHD1O75717 1129 aaPredicted RBP13.47□□□□□ -0.25
C1R-206ENST00000540394 RAD17O75943 681 aa13.47□□□□□ -0.25
C1R-206ENST00000540394 GJB2P29033 226 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms