RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 APOA5Q6Q788 366 aa20.09■□□□□ 0.81
LTBR-207ENST00000539925 NFXL1Q6ZNB6 911 aa20.09■□□□□ 0.81
LTBR-207ENST00000539925 FAM163AQ96GL9 167 aaPredicted RBP20.09■□□□□ 0.81
LTBR-207ENST00000539925 UBAC1Q9BSL1 405 aa20.09■□□□□ 0.81
LTBR-207ENST00000539925 SCAND2PQ9GZW5 306 aaPredicted RBP20.09■□□□□ 0.81
LTBR-207ENST00000539925 HPS5Q9UPZ3 1129 aa20.09■□□□□ 0.81
LTBR-207ENST00000539925 CCDC196A0A1B0GTZ2 297 aa20.08■□□□□ 0.81
LTBR-207ENST00000539925 MINDY4BA8MYZ0 360 aa20.08■□□□□ 0.81
LTBR-207ENST00000539925 UBE2HP62256 183 aa20.08■□□□□ 0.81
LTBR-207ENST00000539925 CDC37L1Q7L3B6 337 aa20.08■□□□□ 0.81
LTBR-207ENST00000539925 ZC3H12CQ9C0D7 883 aaKnown RBP20.08■□□□□ 0.81
LTBR-207ENST00000539925 GZF1Q9H116 711 aaPredicted RBP20.08■□□□□ 0.81
LTBR-207ENST00000539925 LY9Q9HBG7 655 aa20.08■□□□□ 0.81
LTBR-207ENST00000539925 TOMM22Q9NS69 142 aa20.08■□□□□ 0.81
LTBR-207ENST00000539925 AATFQ9NY61 560 aaKnown RBP eCLIP20.08■□□□□ 0.81
LTBR-207ENST00000539925 SLC12A7Q9Y666 1083 aa20.08■□□□□ 0.81
LTBR-207ENST00000539925 CHD4Q14839 1912 aa20.08■□□□□ 0.8
LTBR-207ENST00000539925 LTBP1Q14766 1721 aa20.07■□□□□ 0.8
LTBR-207ENST00000539925 ORC4O43929 436 aa20.07■□□□□ 0.8
LTBR-207ENST00000539925 WTAPQ15007 396 aa20.07■□□□□ 0.8
LTBR-207ENST00000539925 EZH2Q15910 746 aaKnown RBP20.07■□□□□ 0.8
LTBR-207ENST00000539925 DPP8Q6V1X1 898 aaPredicted RBP20.07■□□□□ 0.8
LTBR-207ENST00000539925 CNKSR1Q969H4 720 aa20.07■□□□□ 0.8
LTBR-207ENST00000539925 DCP1AQ9NPI6 582 aaPredicted RBP20.07■□□□□ 0.8
LTBR-207ENST00000539925 MROH7-TTC4A0A0A0MT08 1334 aa20.07■□□□□ 0.8
LTBR-207ENST00000539925 ELP1O95163 1332 aa20.07■□□□□ 0.8
LTBR-207ENST00000539925 EN1Q05925 392 aaPredicted RBP20.07■□□□□ 0.8
LTBR-207ENST00000539925 GRIPAP1Q4V328 841 aa20.07■□□□□ 0.8
LTBR-207ENST00000539925 CC2D2BQ6DHV5 1058 aa20.07■□□□□ 0.8
LTBR-207ENST00000539925 CTR9Q6PD62 1173 aa20.07■□□□□ 0.8
LTBR-207ENST00000539925 USP48Q86UV5 1035 aa20.07■□□□□ 0.8
LTBR-207ENST00000539925 IQCA1Q86XH1 822 aa20.07■□□□□ 0.8
LTBR-207ENST00000539925 DDX11Q96FC9 970 aa20.07■□□□□ 0.8
LTBR-207ENST00000539925 FSD2A1L4K1 749 aa20.06■□□□□ 0.8
LTBR-207ENST00000539925 PDE4BQ07343 736 aa20.06■□□□□ 0.8
LTBR-207ENST00000539925 C2CD5Q86YS7 1000 aa20.06■□□□□ 0.8
LTBR-207ENST00000539925 NCOA5Q9HCD5 579 aaKnown RBP20.06■□□□□ 0.8
LTBR-207ENST00000539925 GPHNQ9NQX3 736 aaPredicted RBP20.06■□□□□ 0.8
LTBR-207ENST00000539925 CFAP45Q9UL16 551 aa20.06■□□□□ 0.8
LTBR-207ENST00000539925 USP17L12C9JPN9 530 aa20.05■□□□□ 0.8
LTBR-207ENST00000539925 USP17L21D6R901 530 aa20.05■□□□□ 0.8
LTBR-207ENST00000539925 RRP12Q5JTH9 1297 aaKnown RBP20.05■□□□□ 0.8
LTBR-207ENST00000539925 WASF1Q92558 559 aa20.05■□□□□ 0.8
LTBR-207ENST00000539925 ORC3Q9UBD5 711 aaPredicted RBP20.05■□□□□ 0.8
LTBR-207ENST00000539925 ZNF445P59923 1031 aa20.04■□□□□ 0.8
LTBR-207ENST00000539925 DNM1Q05193 864 aaKnown RBP20.04■□□□□ 0.8
LTBR-207ENST00000539925 CCDC178Q5BJE1 867 aa20.04■□□□□ 0.8
LTBR-207ENST00000539925 MFSD14BQ5SR56 506 aa20.04■□□□□ 0.8
LTBR-207ENST00000539925 GPT2Q8TD30 523 aa20.04■□□□□ 0.8
LTBR-207ENST00000539925 SLC16A10Q8TF71 515 aa20.04■□□□□ 0.8
LTBR-207ENST00000539925 ZNF287Q9HBT7 754 aa20.04■□□□□ 0.8
LTBR-207ENST00000539925 CNPY2Q9Y2B0 182 aa20.04■□□□□ 0.8
LTBR-207ENST00000539925 STK36Q9NRP7 1315 aa20.04■□□□□ 0.8
LTBR-207ENST00000539925 EP400Q96L91 3159 aa20.04■□□□□ 0.8
LTBR-207ENST00000539925 GPR75-ASB3A0A0A6YYF3 556 aa20.03■□□□□ 0.8
LTBR-207ENST00000539925 GOLGA8AA7E2F4 631 aa20.03■□□□□ 0.8
LTBR-207ENST00000539925 USP5P45974 858 aa20.03■□□□□ 0.8
LTBR-207ENST00000539925 RESTQ13127 1097 aa20.03■□□□□ 0.8
LTBR-207ENST00000539925 CAVIN1Q6NZI2 390 aaKnown RBP20.03■□□□□ 0.8
LTBR-207ENST00000539925 ANO8Q9HCE9 1232 aaPredicted RBP20.03■□□□□ 0.8
LTBR-207ENST00000539925 CALM1P0DP23 149 aa20.03■□□□□ 0.8
LTBR-207ENST00000539925 CALM2P0DP24 149 aa20.03■□□□□ 0.8
LTBR-207ENST00000539925 CALM3P0DP25 149 aa20.03■□□□□ 0.8
LTBR-207ENST00000539925 MRE11P49959 708 aa20.03■□□□□ 0.8
LTBR-207ENST00000539925 MSL1Q68DK7 614 aa20.03■□□□□ 0.8
LTBR-207ENST00000539925 ZNF622Q969S3 477 aaKnown RBP eCLIP20.03■□□□□ 0.8
LTBR-207ENST00000539925 C8orf76Q96K31 380 aa20.03■□□□□ 0.8
LTBR-207ENST00000539925 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.03■□□□□ 0.8
LTBR-207ENST00000539925 G3V3G9 751 aa20.02■□□□□ 0.8
LTBR-207ENST00000539925 LETM1O95202 739 aaPredicted RBP20.02■□□□□ 0.8
LTBR-207ENST00000539925 DCAF8Q5TAQ9 597 aa20.02■□□□□ 0.8
LTBR-207ENST00000539925 ZNF396Q96N95 335 aaPredicted RBP20.02■□□□□ 0.8
LTBR-207ENST00000539925 GPR101Q96P66 508 aaPredicted RBP20.02■□□□□ 0.8
LTBR-207ENST00000539925 GAKO14976 1311 aa20.02■□□□□ 0.8
LTBR-207ENST00000539925 FIBPO43427 364 aa20.01■□□□□ 0.79
LTBR-207ENST00000539925 PODNQ7Z5L7 613 aa20.01■□□□□ 0.79
LTBR-207ENST00000539925 ZSCAN10Q96SZ4 725 aaPredicted RBP20.01■□□□□ 0.79
LTBR-207ENST00000539925 RTFDC1Q9BY42 306 aaPredicted RBP20.01■□□□□ 0.79
LTBR-207ENST00000539925 MCM9Q9NXL9 1143 aa20.01■□□□□ 0.79
LTBR-207ENST00000539925 MKRN1Q9UHC7 482 aaKnown RBP20.01■□□□□ 0.79
LTBR-207ENST00000539925 ROBO3Q96MS0 1386 aa20.01■□□□□ 0.79
LTBR-207ENST00000539925 FDPSP14324 419 aaKnown RBP20■□□□□ 0.79
LTBR-207ENST00000539925 IFNAR1P17181 557 aa20■□□□□ 0.79
LTBR-207ENST00000539925 IARSP41252 1262 aaKnown RBP20■□□□□ 0.79
LTBR-207ENST00000539925 FKBP1AP62942 108 aaKnown RBP20■□□□□ 0.79
LTBR-207ENST00000539925 FOXD4L6Q3SYB3 417 aaPredicted RBP20■□□□□ 0.79
LTBR-207ENST00000539925 FOXD4L3Q6VB84 417 aaPredicted RBP20■□□□□ 0.79
LTBR-207ENST00000539925 BRAPQ7Z569 592 aa20■□□□□ 0.79
LTBR-207ENST00000539925 FERMT3Q86UX7 667 aa20■□□□□ 0.79
LTBR-207ENST00000539925 MICU3Q86XE3 530 aa20■□□□□ 0.79
LTBR-207ENST00000539925 CCDC125Q86Z20 511 aa20■□□□□ 0.79
LTBR-207ENST00000539925 SUPT20HQ8NEM7 779 aa20■□□□□ 0.79
LTBR-207ENST00000539925 FBXO18Q8NFZ0 1043 aa20■□□□□ 0.79
LTBR-207ENST00000539925 JAG2Q9Y219 1238 aa20■□□□□ 0.79
LTBR-207ENST00000539925 TACC3Q9Y6A5 838 aa20■□□□□ 0.79
LTBR-207ENST00000539925 RANBP6O60518 1105 aaKnown RBP20■□□□□ 0.79
LTBR-207ENST00000539925 SEC23AQ15436 765 aa20■□□□□ 0.79
LTBR-207ENST00000539925 RTN1Q16799 776 aa20■□□□□ 0.79
LTBR-207ENST00000539925 ZSCAN23Q3MJ62 389 aa20■□□□□ 0.79
LTBR-207ENST00000539925 C12orf60Q5U649 245 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms