RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 DDTLA6NHG4 134 aaPredicted RBP20.61■□□□□ 0.89
DDB1-215ENST00000539712 TNRC18O15417 2968 aaPredicted RBP20.61■□□□□ 0.89
DDB1-215ENST00000539712 CYP2E1P05181 493 aaPredicted RBP20.61■□□□□ 0.89
DDB1-215ENST00000539712 RGS19P49795 217 aa20.61■□□□□ 0.89
DDB1-215ENST00000539712 CAP1Q01518 475 aa20.61■□□□□ 0.89
DDB1-215ENST00000539712 CCL15Q16663 113 aa20.61■□□□□ 0.89
DDB1-215ENST00000539712 FAM43AQ8N2R8 423 aa20.61■□□□□ 0.89
DDB1-215ENST00000539712 CCDC8Q9H0W5 538 aaPredicted RBP20.61■□□□□ 0.89
DDB1-215ENST00000539712 EXOC6BQ9Y2D4 811 aa20.61■□□□□ 0.89
DDB1-215ENST00000539712 NPM3O75607 178 aaKnown RBP20.6■□□□□ 0.89
DDB1-215ENST00000539712 PPIL2Q13356 520 aa20.6■□□□□ 0.89
DDB1-215ENST00000539712 CCDC158Q5M9N0 1113 aa20.6■□□□□ 0.89
DDB1-215ENST00000539712 TTC39AQ5SRH9 613 aa20.6■□□□□ 0.89
DDB1-215ENST00000539712 NOL9Q5SY16 702 aaKnown RBP20.6■□□□□ 0.89
DDB1-215ENST00000539712 OTUD7BQ6GQQ9 843 aa20.6■□□□□ 0.89
DDB1-215ENST00000539712 RAI14Q9P0K7 980 aa20.6■□□□□ 0.89
DDB1-215ENST00000539712 AK9Q5TCS8 1911 aa20.6■□□□□ 0.89
DDB1-215ENST00000539712 GSTO1P78417 241 aa20.59■□□□□ 0.89
DDB1-215ENST00000539712 PPATQ06203 517 aa20.59■□□□□ 0.89
DDB1-215ENST00000539712 PKN2Q16513 984 aaKnown RBP20.59■□□□□ 0.89
DDB1-215ENST00000539712 C20orf194Q5TEA3 1177 aa20.59■□□□□ 0.89
DDB1-215ENST00000539712 LRP2BPQ9P2M1 347 aa20.59■□□□□ 0.89
DDB1-215ENST00000539712 LDHCP07864 332 aa20.58■□□□□ 0.89
DDB1-215ENST00000539712 ZAP70P43403 619 aa20.58■□□□□ 0.89
DDB1-215ENST00000539712 MOGSQ13724 837 aa20.58■□□□□ 0.89
DDB1-215ENST00000539712 ADGRA1Q86SQ6 560 aa20.58■□□□□ 0.89
DDB1-215ENST00000539712 PIH1D3Q9NQM4 214 aaKnown RBP20.58■□□□□ 0.89
DDB1-215ENST00000539712 DDX19BQ9UMR2 479 aa20.58■□□□□ 0.89
DDB1-215ENST00000539712 HPS5Q9UPZ3 1129 aa20.58■□□□□ 0.89
DDB1-215ENST00000539712 BTBD19C9JJ37 291 aa20.57■□□□□ 0.88
DDB1-215ENST00000539712 CETPP11597 493 aa20.57■□□□□ 0.88
DDB1-215ENST00000539712 SNAPC2Q13487 334 aa20.57■□□□□ 0.88
DDB1-215ENST00000539712 PICALMQ13492 652 aa20.57■□□□□ 0.88
DDB1-215ENST00000539712 RPAP2Q8IXW5 612 aaPredicted RBP20.57■□□□□ 0.88
DDB1-215ENST00000539712 KCNH4Q9UQ05 1017 aa20.57■□□□□ 0.88
DDB1-215ENST00000539712 MYO5AQ9Y4I1 1855 aaKnown RBP20.56■□□□□ 0.88
DDB1-215ENST00000539712 MAP4K4O95819 1239 aaPredicted RBP20.56■□□□□ 0.88
DDB1-215ENST00000539712 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.56■□□□□ 0.88
DDB1-215ENST00000539712 DOCK2Q92608 1830 aa20.55■□□□□ 0.88
DDB1-215ENST00000539712 PPP4CP60510 307 aa20.55■□□□□ 0.88
DDB1-215ENST00000539712 FBXO46Q6PJ61 603 aaPredicted RBP20.55■□□□□ 0.88
DDB1-215ENST00000539712 ERC1Q8IUD2 1116 aa20.55■□□□□ 0.88
DDB1-215ENST00000539712 ZSCAN29Q8IWY8 852 aaPredicted RBP20.55■□□□□ 0.88
DDB1-215ENST00000539712 RHPN1Q8TCX5 695 aa20.55■□□□□ 0.88
DDB1-215ENST00000539712 SH3RF3Q8TEJ3 882 aaPredicted RBP20.55■□□□□ 0.88
DDB1-215ENST00000539712 TBC1D12O60347 775 aa20.54■□□□□ 0.88
DDB1-215ENST00000539712 SP3Q02447 781 aa20.54■□□□□ 0.88
DDB1-215ENST00000539712 PDE3AQ14432 1141 aa20.54■□□□□ 0.88
DDB1-215ENST00000539712 TAF1CQ15572 869 aaPredicted RBP20.54■□□□□ 0.88
DDB1-215ENST00000539712 NAA16Q6N069 864 aaPredicted RBP20.54■□□□□ 0.88
DDB1-215ENST00000539712 OTOP1Q7RTM1 612 aa20.54■□□□□ 0.88
DDB1-215ENST00000539712 AACSQ86V21 672 aa20.54■□□□□ 0.88
DDB1-215ENST00000539712 CD99L2Q8TCZ2 262 aa20.54■□□□□ 0.88
DDB1-215ENST00000539712 IL1RAPL2Q9NP60 686 aa20.54■□□□□ 0.88
DDB1-215ENST00000539712 ZCCHC17Q9NP64 241 aaKnown RBP20.54■□□□□ 0.88
DDB1-215ENST00000539712 NDUFB9Q9Y6M9 179 aa20.54■□□□□ 0.88
DDB1-215ENST00000539712 SCYL3Q8IZE3 742 aa20.53■□□□□ 0.88
DDB1-215ENST00000539712 OSBPL5Q9H0X9 879 aaPredicted RBP20.53■□□□□ 0.88
DDB1-215ENST00000539712 ANTXR1Q9H6X2 564 aa20.53■□□□□ 0.88
DDB1-215ENST00000539712 ZFYVE28Q9HCC9 887 aa20.53■□□□□ 0.88
DDB1-215ENST00000539712 AATFQ9NY61 560 aaKnown RBP eCLIP20.53■□□□□ 0.88
DDB1-215ENST00000539712 COL2A1P02458 1487 aaPredicted RBP20.53■□□□□ 0.88
DDB1-215ENST00000539712 IGSF3O75054 1194 aa20.52■□□□□ 0.88
DDB1-215ENST00000539712 PTPRAP18433 802 aa20.52■□□□□ 0.88
DDB1-215ENST00000539712 HSP90AB4PQ58FF6 505 aa20.52■□□□□ 0.88
DDB1-215ENST00000539712 TEX11Q8IYF3 940 aa20.52■□□□□ 0.88
DDB1-215ENST00000539712 TRIM17Q9Y577 477 aa20.52■□□□□ 0.88
DDB1-215ENST00000539712 BRCA2P51587 3418 aa20.52■□□□□ 0.88
DDB1-215ENST00000539712 FAM196BA6NMK8 535 aa20.51■□□□□ 0.87
DDB1-215ENST00000539712 TLR2O60603 784 aa20.51■□□□□ 0.87
DDB1-215ENST00000539712 CTNND1O60716 968 aaKnown RBP20.51■□□□□ 0.87
DDB1-215ENST00000539712 RRP1BQ14684 758 aaKnown RBP20.51■□□□□ 0.87
DDB1-215ENST00000539712 GPAT2Q6NUI2 795 aa20.51■□□□□ 0.87
DDB1-215ENST00000539712 ERO1AQ96HE7 468 aa20.51■□□□□ 0.87
DDB1-215ENST00000539712 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.51■□□□□ 0.87
DDB1-215ENST00000539712 AFG3L2Q9Y4W6 797 aa20.51■□□□□ 0.87
DDB1-215ENST00000539712 ZHX2Q9Y6X8 837 aa20.51■□□□□ 0.87
DDB1-215ENST00000539712 MAST2Q6P0Q8 1798 aa20.51■□□□□ 0.87
DDB1-215ENST00000539712 CXCL11O14625 94 aa20.5■□□□□ 0.87
DDB1-215ENST00000539712 SOX10P56693 466 aa20.5■□□□□ 0.87
DDB1-215ENST00000539712 ANKRD23Q86SG2 305 aa20.5■□□□□ 0.87
DDB1-215ENST00000539712 KIF1BPQ96EK5 621 aa20.5■□□□□ 0.87
DDB1-215ENST00000539712 MKI67P46013 3256 aaKnown RBP20.49■□□□□ 0.87
DDB1-215ENST00000539712 HMMRO75330 724 aa20.49■□□□□ 0.87
DDB1-215ENST00000539712 BAG3O95817 575 aa20.49■□□□□ 0.87
DDB1-215ENST00000539712 DYNLL1P63167 89 aaKnown RBP20.49■□□□□ 0.87
DDB1-215ENST00000539712 PTPN22Q9Y2R2 807 aa20.49■□□□□ 0.87
DDB1-215ENST00000539712 ADGRA2Q96PE1 1338 aa20.49■□□□□ 0.87
DDB1-215ENST00000539712 A0A0G2JLL6 359 aaPredicted RBP20.48■□□□□ 0.87
DDB1-215ENST00000539712 APBB1O00213 710 aa20.48■□□□□ 0.87
DDB1-215ENST00000539712 PDHXO00330 501 aa20.48■□□□□ 0.87
DDB1-215ENST00000539712 CYP7A1P22680 504 aa20.48■□□□□ 0.87
DDB1-215ENST00000539712 MLLT1Q03111 559 aaPredicted RBP20.48■□□□□ 0.87
DDB1-215ENST00000539712 C17orf99Q6UX52 265 aa20.48■□□□□ 0.87
DDB1-215ENST00000539712 PRRT2Q7Z6L0 340 aaPredicted RBP20.48■□□□□ 0.87
DDB1-215ENST00000539712 CCDC84Q86UT8 332 aaPredicted RBP20.48■□□□□ 0.87
DDB1-215ENST00000539712 TGFBRAP1Q8WUH2 860 aa20.48■□□□□ 0.87
DDB1-215ENST00000539712 EFCC1Q9HA90 598 aa20.48■□□□□ 0.87
DDB1-215ENST00000539712 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.48■□□□□ 0.87
DDB1-215ENST00000539712 PICK1Q9NRD5 415 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 244.5 ms