RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 TRIM29Q14134 588 aa11.87□□□□□ -0.51
SPARC-209ENST00000539687 WTAPQ15007 396 aa11.87□□□□□ -0.51
SPARC-209ENST00000539687 CCDC178Q5BJE1 867 aa11.87□□□□□ -0.51
SPARC-209ENST00000539687 CHST3Q7LGC8 479 aa11.87□□□□□ -0.51
SPARC-209ENST00000539687 AMIGO3Q86WK7 504 aa11.87□□□□□ -0.51
SPARC-209ENST00000539687 IQCA1Q86XH1 822 aa11.87□□□□□ -0.51
SPARC-209ENST00000539687 TDRD7Q8NHU6 1098 aaKnown RBP11.87□□□□□ -0.51
SPARC-209ENST00000539687 TBC1D22AQ8WUA7 517 aa11.87□□□□□ -0.51
SPARC-209ENST00000539687 NBPF3Q9H094 633 aa11.87□□□□□ -0.51
SPARC-209ENST00000539687 TSPY26PQ9H489 355 aa11.87□□□□□ -0.51
SPARC-209ENST00000539687 DDX19AQ9NUU7 478 aaKnown RBP11.87□□□□□ -0.51
SPARC-209ENST00000539687 ORC3Q9UBD5 711 aaPredicted RBP11.87□□□□□ -0.51
SPARC-209ENST00000539687 CACNA1SQ13698 1873 aa11.87□□□□□ -0.51
SPARC-209ENST00000539687 NEDD4P46934 1319 aa11.86□□□□□ -0.51
SPARC-209ENST00000539687 IRS2Q9Y4H2 1338 aa11.86□□□□□ -0.51
SPARC-209ENST00000539687 A0A0G2JLW4 131 aa11.86□□□□□ -0.51
SPARC-209ENST00000539687 GOLGA8AA7E2F4 631 aa11.86□□□□□ -0.51
SPARC-209ENST00000539687 POLRMTO00411 1230 aaKnown RBP11.86□□□□□ -0.51
SPARC-209ENST00000539687 LDHBP07195 334 aaKnown RBP11.86□□□□□ -0.51
SPARC-209ENST00000539687 PLCG2P16885 1265 aa11.86□□□□□ -0.51
SPARC-209ENST00000539687 MECOMQ03112 1051 aa11.86□□□□□ -0.51
SPARC-209ENST00000539687 COL9A3Q14050 684 aaPredicted RBP11.86□□□□□ -0.51
SPARC-209ENST00000539687 FOXD4L6Q3SYB3 417 aaPredicted RBP11.86□□□□□ -0.51
SPARC-209ENST00000539687 SBK1Q52WX2 424 aa11.86□□□□□ -0.51
SPARC-209ENST00000539687 APOA5Q6Q788 366 aa11.86□□□□□ -0.51
SPARC-209ENST00000539687 FOXD4L3Q6VB84 417 aaPredicted RBP11.86□□□□□ -0.51
SPARC-209ENST00000539687 CYB5R4Q7L1T6 521 aa11.86□□□□□ -0.51
SPARC-209ENST00000539687 TRIM22Q8IYM9 498 aa11.86□□□□□ -0.51
SPARC-209ENST00000539687 MIGA1Q8NAN2 632 aa11.86□□□□□ -0.51
SPARC-209ENST00000539687 IGDCC4Q8TDY8 1250 aa11.86□□□□□ -0.51
SPARC-209ENST00000539687 LY9Q9HBG7 655 aa11.86□□□□□ -0.51
SPARC-209ENST00000539687 GDPD2Q9HCC8 539 aa11.86□□□□□ -0.51
SPARC-209ENST00000539687 TOMM22Q9NS69 142 aa11.86□□□□□ -0.51
SPARC-209ENST00000539687 TFCP2L1Q9NZI6 479 aa11.86□□□□□ -0.51
SPARC-209ENST00000539687 BRPF3Q9ULD4 1205 aa11.86□□□□□ -0.51
SPARC-209ENST00000539687 HPS5Q9UPZ3 1129 aa11.86□□□□□ -0.51
SPARC-209ENST00000539687 SSUH2Q9Y2M2 353 aa11.86□□□□□ -0.51
SPARC-209ENST00000539687 COL4A1P02462 1669 aa11.86□□□□□ -0.51
SPARC-209ENST00000539687 CCDC88AQ3V6T2 1871 aa11.85□□□□□ -0.51
SPARC-209ENST00000539687 MYO5AQ9Y4I1 1855 aaKnown RBP11.85□□□□□ -0.51
SPARC-209ENST00000539687 SYCE3A1L190 88 aa11.85□□□□□ -0.51
SPARC-209ENST00000539687 KDM4AO75164 1064 aa11.85□□□□□ -0.51
SPARC-209ENST00000539687 FGRP09769 529 aa11.85□□□□□ -0.51
SPARC-209ENST00000539687 ALDH1B1P30837 517 aa11.85□□□□□ -0.51
SPARC-209ENST00000539687 PDE6BP35913 854 aa11.85□□□□□ -0.51
SPARC-209ENST00000539687 PDE4BQ07343 736 aa11.85□□□□□ -0.51
SPARC-209ENST00000539687 CHAF1AQ13111 956 aaPredicted RBP11.85□□□□□ -0.51
SPARC-209ENST00000539687 UVSSAQ2YD98 709 aa11.85□□□□□ -0.51
SPARC-209ENST00000539687 FERMT3Q86UX7 667 aa11.85□□□□□ -0.51
SPARC-209ENST00000539687 SP8Q8IXZ3 490 aa11.85□□□□□ -0.51
SPARC-209ENST00000539687 FBXO18Q8NFZ0 1043 aa11.85□□□□□ -0.51
SPARC-209ENST00000539687 LEO1Q8WVC0 666 aaPredicted RBP11.85□□□□□ -0.51
SPARC-209ENST00000539687 ZNF287Q9HBT7 754 aa11.85□□□□□ -0.51
SPARC-209ENST00000539687 NCOA5Q9HCD5 579 aaKnown RBP11.85□□□□□ -0.51
SPARC-209ENST00000539687 ZSWIM5Q9P217 1185 aa11.85□□□□□ -0.51
SPARC-209ENST00000539687 IQSEC3Q9UPP2 1182 aaPredicted RBP11.85□□□□□ -0.51
SPARC-209ENST00000539687 SUGT1Q9Y2Z0 365 aa11.85□□□□□ -0.51
SPARC-209ENST00000539687 CHD4Q14839 1912 aa11.85□□□□□ -0.51
SPARC-209ENST00000539687 CTAGE5O15320 804 aa11.84□□□□□ -0.51
SPARC-209ENST00000539687 PRKAB2O43741 272 aa11.84□□□□□ -0.51
SPARC-209ENST00000539687 ORC4O43929 436 aa11.84□□□□□ -0.51
SPARC-209ENST00000539687 GADD45BO75293 160 aaPredicted RBP11.84□□□□□ -0.51
SPARC-209ENST00000539687 UFL1O94874 794 aa11.84□□□□□ -0.51
SPARC-209ENST00000539687 APBA3O96018 575 aa11.84□□□□□ -0.51
SPARC-209ENST00000539687 IL1R1P14778 569 aa11.84□□□□□ -0.51
SPARC-209ENST00000539687 NPR1P16066 1061 aa11.84□□□□□ -0.51
SPARC-209ENST00000539687 IARSP41252 1262 aaKnown RBP11.84□□□□□ -0.51
SPARC-209ENST00000539687 PPP4CP60510 307 aa11.84□□□□□ -0.51
SPARC-209ENST00000539687 CTDSPL2Q05D32 466 aa11.84□□□□□ -0.51
SPARC-209ENST00000539687 SMIM5Q71RC9 77 aa11.84□□□□□ -0.51
SPARC-209ENST00000539687 TTC6Q86TZ1 520 aa11.84□□□□□ -0.51
SPARC-209ENST00000539687 GAS2L3Q86XJ1 694 aa11.84□□□□□ -0.51
SPARC-209ENST00000539687 TRIM44Q96DX7 344 aaPredicted RBP11.84□□□□□ -0.51
SPARC-209ENST00000539687 RBM28Q9NW13 759 aaKnown RBP11.84□□□□□ -0.51
SPARC-209ENST00000539687 RBM27Q9P2N5 1060 aaKnown RBP11.84□□□□□ -0.51
SPARC-209ENST00000539687 RCOR1Q9UKL0 485 aa11.84□□□□□ -0.51
SPARC-209ENST00000539687 LRRC37AA6NMS7 1700 aa11.83□□□□□ -0.52
SPARC-209ENST00000539687 MINDY4BA8MYZ0 360 aa11.83□□□□□ -0.52
SPARC-209ENST00000539687 PPEF1O14829 653 aaPredicted RBP11.83□□□□□ -0.52
SPARC-209ENST00000539687 YEATS4O95619 227 aa11.83□□□□□ -0.52
SPARC-209ENST00000539687 CAVIN2O95810 425 aa11.83□□□□□ -0.52
SPARC-209ENST00000539687 IFNAR1P17181 557 aa11.83□□□□□ -0.52
SPARC-209ENST00000539687 XBP1P17861 261 aa11.83□□□□□ -0.52
SPARC-209ENST00000539687 SSRP1Q08945 709 aaKnown RBP11.83□□□□□ -0.52
SPARC-209ENST00000539687 SAFBQ15424 915 aaKnown RBP eCLIP11.83□□□□□ -0.52
SPARC-209ENST00000539687 EZH2Q15910 746 aaKnown RBP11.83□□□□□ -0.52
SPARC-209ENST00000539687 RTN1Q16799 776 aa11.83□□□□□ -0.52
SPARC-209ENST00000539687 RRP12Q5JTH9 1297 aaKnown RBP11.83□□□□□ -0.52
SPARC-209ENST00000539687 ADGRA1Q86SQ6 560 aa11.83□□□□□ -0.52
SPARC-209ENST00000539687 BICD2Q8TD16 824 aa11.83□□□□□ -0.52
SPARC-209ENST00000539687 KCNG4Q8TDN1 519 aa11.83□□□□□ -0.52
SPARC-209ENST00000539687 NSFL1CQ9UNZ2 370 aaKnown RBP11.83□□□□□ -0.52
SPARC-209ENST00000539687 PARP3Q9Y6F1 533 aa11.83□□□□□ -0.52
SPARC-209ENST00000539687 NRXN2Q9P2S2 1712 aa11.83□□□□□ -0.52
SPARC-209ENST00000539687 DDAH1O94760 285 aa11.82□□□□□ -0.52
SPARC-209ENST00000539687 DEXIO95424 95 aa11.82□□□□□ -0.52
SPARC-209ENST00000539687 FMNL1O95466 1100 aaPredicted RBP11.82□□□□□ -0.52
SPARC-209ENST00000539687 CCDC192P0DO97 292 aa11.82□□□□□ -0.52
SPARC-209ENST00000539687 FDPSP14324 419 aaKnown RBP11.82□□□□□ -0.52
SPARC-209ENST00000539687 KLRK1P26718 216 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms