RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 TDO2P48775 406 aa16.28■□□□□ 0.2
UBE3B-210ENST00000539599 PDCL2Q8N4E4 241 aa16.28■□□□□ 0.2
UBE3B-210ENST00000539599 MAP7D2Q96T17 732 aa16.28■□□□□ 0.2
UBE3B-210ENST00000539599 MAP3K14Q99558 947 aa16.28■□□□□ 0.2
UBE3B-210ENST00000539599 ABCF2Q9UG63 623 aa16.28■□□□□ 0.2
UBE3B-210ENST00000539599 SLC4A4Q9Y6R1 1079 aa16.28■□□□□ 0.2
UBE3B-210ENST00000539599 FAM205CA6NFA0 338 aa16.27■□□□□ 0.2
UBE3B-210ENST00000539599 MINDY4BA8MYZ0 360 aa16.27■□□□□ 0.2
UBE3B-210ENST00000539599 EXOC5O00471 708 aa16.27■□□□□ 0.2
UBE3B-210ENST00000539599 TTF1Q15361 905 aaPredicted RBP16.27■□□□□ 0.2
UBE3B-210ENST00000539599 SLC4A8Q2Y0W8 1093 aa16.27■□□□□ 0.2
UBE3B-210ENST00000539599 C3orf67Q6ZVT6 689 aa16.27■□□□□ 0.2
UBE3B-210ENST00000539599 ZNF34Q8IZ26 560 aa16.27■□□□□ 0.2
UBE3B-210ENST00000539599 KLHL34Q8N239 644 aa16.27■□□□□ 0.2
UBE3B-210ENST00000539599 CCDC24Q8N4L8 307 aa16.27■□□□□ 0.2
UBE3B-210ENST00000539599 OXER1Q8TDS5 423 aa16.27■□□□□ 0.2
UBE3B-210ENST00000539599 CCDC94Q9BW85 323 aaPredicted RBP16.27■□□□□ 0.2
UBE3B-210ENST00000539599 SLC12A7Q9Y666 1083 aa16.27■□□□□ 0.2
UBE3B-210ENST00000539599 LRP6O75581 1613 aa16.27■□□□□ 0.2
UBE3B-210ENST00000539599 DDX60Q8IY21 1712 aaKnown RBP16.27■□□□□ 0.2
UBE3B-210ENST00000539599 IGSF3O75054 1194 aa16.27■□□□□ 0.2
UBE3B-210ENST00000539599 PRDM1O75626 825 aa16.27■□□□□ 0.2
UBE3B-210ENST00000539599 PDILTQ8N807 584 aa16.27■□□□□ 0.2
UBE3B-210ENST00000539599 TMEM232C9JQI7 657 aa16.26■□□□□ 0.19
UBE3B-210ENST00000539599 CMA1P23946 247 aa16.26■□□□□ 0.19
UBE3B-210ENST00000539599 PDE4BQ07343 736 aa16.26■□□□□ 0.19
UBE3B-210ENST00000539599 SLC51AQ86UW1 340 aa16.26■□□□□ 0.19
UBE3B-210ENST00000539599 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.26■□□□□ 0.19
UBE3B-210ENST00000539599 MYH3P11055 1940 aa16.26■□□□□ 0.19
UBE3B-210ENST00000539599 ECM29Q5VYK3 1845 aa16.26■□□□□ 0.19
UBE3B-210ENST00000539599 PATL2C9JE40 543 aaKnown RBP16.26■□□□□ 0.19
UBE3B-210ENST00000539599 CTIFO43310 598 aaKnown RBP16.26■□□□□ 0.19
UBE3B-210ENST00000539599 CAVIN2O95810 425 aa16.26■□□□□ 0.19
UBE3B-210ENST00000539599 ATP6V1AP38606 617 aa16.26■□□□□ 0.19
UBE3B-210ENST00000539599 GYG1P46976 350 aa16.26■□□□□ 0.19
UBE3B-210ENST00000539599 NLRP12P59046 1061 aa16.26■□□□□ 0.19
UBE3B-210ENST00000539599 INTS5Q6P9B9 1019 aaKnown RBP16.26■□□□□ 0.19
UBE3B-210ENST00000539599 USP49Q70CQ1 688 aa16.26■□□□□ 0.19
UBE3B-210ENST00000539599 METTL16Q86W50 562 aaKnown RBP16.26■□□□□ 0.19
UBE3B-210ENST00000539599 LRRN4CLQ8ND94 238 aa16.26■□□□□ 0.19
UBE3B-210ENST00000539599 NAT10Q9H0A0 1025 aaKnown RBP16.26■□□□□ 0.19
UBE3B-210ENST00000539599 CRKLP46109 303 aaKnown RBP16.26■□□□□ 0.19
UBE3B-210ENST00000539599 TOB1P50616 345 aaPredicted RBP16.26■□□□□ 0.19
UBE3B-210ENST00000539599 ITPK1Q13572 414 aa16.26■□□□□ 0.19
UBE3B-210ENST00000539599 SHISA4Q96DD7 197 aa16.26■□□□□ 0.19
UBE3B-210ENST00000539599 JAG2Q9Y219 1238 aa16.26■□□□□ 0.19
UBE3B-210ENST00000539599 BAZ2BQ9UIF8 2168 aaKnown RBP16.25■□□□□ 0.19
UBE3B-210ENST00000539599 PRR29P0C7W0 189 aa16.25■□□□□ 0.19
UBE3B-210ENST00000539599 SLC5A1P13866 664 aa16.25■□□□□ 0.19
UBE3B-210ENST00000539599 BMP6P22004 513 aa16.25■□□□□ 0.19
UBE3B-210ENST00000539599 CCDC112Q8NEF3 446 aa16.25■□□□□ 0.19
UBE3B-210ENST00000539599 NIP7Q9Y221 180 aaKnown RBP eCLIP16.25■□□□□ 0.19
UBE3B-210ENST00000539599 TAF1P21675 1872 aa16.25■□□□□ 0.19
UBE3B-210ENST00000539599 MAP3K12Q12852 859 aa16.25■□□□□ 0.19
UBE3B-210ENST00000539599 E4F1Q66K89 784 aaPredicted RBP16.25■□□□□ 0.19
UBE3B-210ENST00000539599 BICDL1Q6ZP65 573 aa16.25■□□□□ 0.19
UBE3B-210ENST00000539599 CCAR2Q8N163 923 aaKnown RBP16.25■□□□□ 0.19
UBE3B-210ENST00000539599 LRP2BPQ9P2M1 347 aa16.25■□□□□ 0.19
UBE3B-210ENST00000539599 ZNF215Q9UL58 517 aaPredicted RBP16.25■□□□□ 0.19
UBE3B-210ENST00000539599 ATRNO75882 1429 aa16.24■□□□□ 0.19
UBE3B-210ENST00000539599 SMTNL1A8MU46 457 aa16.24■□□□□ 0.19
UBE3B-210ENST00000539599 CASP1P29466 404 aa16.24■□□□□ 0.19
UBE3B-210ENST00000539599 RBM6P78332 1123 aaKnown RBP16.24■□□□□ 0.19
UBE3B-210ENST00000539599 PTPN14Q15678 1187 aa16.24■□□□□ 0.19
UBE3B-210ENST00000539599 NOM1Q5C9Z4 860 aaKnown RBP16.24■□□□□ 0.19
UBE3B-210ENST00000539599 AKNAD1Q5T1N1 836 aa16.24■□□□□ 0.19
UBE3B-210ENST00000539599 MFSD6Q6ZSS7 791 aa16.24■□□□□ 0.19
UBE3B-210ENST00000539599 DIS3L2Q8IYB7 885 aaKnown RBP16.24■□□□□ 0.19
UBE3B-210ENST00000539599 TRMT44Q8IYL2 757 aaKnown RBP16.24■□□□□ 0.19
UBE3B-210ENST00000539599 ANKRD7Q92527 254 aa16.24■□□□□ 0.19
UBE3B-210ENST00000539599 PCDHB6Q9Y5E3 794 aa16.24■□□□□ 0.19
UBE3B-210ENST00000539599 UQCRFS1P1P0C7P4 283 aa16.24■□□□□ 0.19
UBE3B-210ENST00000539599 IL6STP40189 918 aaPredicted RBP16.24■□□□□ 0.19
UBE3B-210ENST00000539599 DYNLL1P63167 89 aaKnown RBP16.24■□□□□ 0.19
UBE3B-210ENST00000539599 FANCCQ00597 558 aa16.24■□□□□ 0.19
UBE3B-210ENST00000539599 KCNQ2O43526 872 aa16.23■□□□□ 0.19
UBE3B-210ENST00000539599 CHRNDQ07001 517 aa16.23■□□□□ 0.19
UBE3B-210ENST00000539599 SSRP1Q08945 709 aaKnown RBP16.23■□□□□ 0.19
UBE3B-210ENST00000539599 TRIM29Q14134 588 aa16.23■□□□□ 0.19
UBE3B-210ENST00000539599 ZNF512BQ96KM6 892 aaPredicted RBP16.23■□□□□ 0.19
UBE3B-210ENST00000539599 TMX1Q9H3N1 280 aa16.23■□□□□ 0.19
UBE3B-210ENST00000539599 HPSEQ9Y251 543 aa16.23■□□□□ 0.19
UBE3B-210ENST00000539599 PCDHA5Q9Y5H7 936 aa16.23■□□□□ 0.19
UBE3B-210ENST00000539599 ABCC12Q96J65 1359 aa16.23■□□□□ 0.19
UBE3B-210ENST00000539599 WNT7AO00755 349 aa16.23■□□□□ 0.19
UBE3B-210ENST00000539599 EIF5P55010 431 aaKnown RBP16.23■□□□□ 0.19
UBE3B-210ENST00000539599 EARS2Q5JPH6 523 aaKnown RBP16.23■□□□□ 0.19
UBE3B-210ENST00000539599 NYAP1Q6ZVC0 841 aa16.23■□□□□ 0.19
UBE3B-210ENST00000539599 FANCLQ9NW38 375 aa16.23■□□□□ 0.19
UBE3B-210ENST00000539599 MROH5Q6ZUA9 1318 aa16.23■□□□□ 0.19
UBE3B-210ENST00000539599 KLRK1P26718 216 aa16.22■□□□□ 0.19
UBE3B-210ENST00000539599 TICAM2Q86XR7 235 aa16.22■□□□□ 0.19
UBE3B-210ENST00000539599 TMEM87BQ96K49 555 aa16.22■□□□□ 0.19
UBE3B-210ENST00000539599 UTP14AQ9BVJ6 771 aaKnown RBP16.22■□□□□ 0.19
UBE3B-210ENST00000539599 STRCQ7RTU9 1775 aa16.22■□□□□ 0.19
UBE3B-210ENST00000539599 COBLO75128 1261 aa16.22■□□□□ 0.19
UBE3B-210ENST00000539599 CYP7A1P22680 504 aa16.22■□□□□ 0.19
UBE3B-210ENST00000539599 CPLX2Q6PUV4 134 aaKnown RBP16.22■□□□□ 0.19
UBE3B-210ENST00000539599 CNNM3Q8NE01 707 aa16.22■□□□□ 0.19
UBE3B-210ENST00000539599 KCNH3Q9ULD8 1083 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms