RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 TRAPPC3LQ5T215 181 aa4.8□□□□□ -1.64
SNHG1-210ENST00000539303 C12orf40Q86WS4 652 aa4.8□□□□□ -1.64
SNHG1-210ENST00000539303 LSRQ86X29 649 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-210ENST00000539303 SVOPQ8N4V2 548 aa4.8□□□□□ -1.64
SNHG1-210ENST00000539303 KLHL23Q8NBE8 558 aa4.8□□□□□ -1.64
SNHG1-210ENST00000539303 WNT8BQ93098 351 aa4.8□□□□□ -1.64
SNHG1-210ENST00000539303 FERD3LQ96RJ6 166 aa4.8□□□□□ -1.64
SNHG1-210ENST00000539303 WDR18Q9BV38 432 aa4.8□□□□□ -1.64
SNHG1-210ENST00000539303 ZSWIM4Q9H7M6 989 aa4.8□□□□□ -1.64
SNHG1-210ENST00000539303 ZNRF3Q9ULT6 936 aa4.8□□□□□ -1.64
SNHG1-210ENST00000539303 PCDHGC5Q9Y5F6 944 aa4.8□□□□□ -1.64
SNHG1-210ENST00000539303 PRAMEF27A3QJZ7 478 aa4.79□□□□□ -1.64
SNHG1-210ENST00000539303 RBAK-RBAKDNI3L0D1 243 aa4.79□□□□□ -1.64
SNHG1-210ENST00000539303 KLF4O43474 513 aa4.79□□□□□ -1.64
SNHG1-210ENST00000539303 WIPF1O43516 503 aa4.79□□□□□ -1.64
SNHG1-210ENST00000539303 AOC2O75106 756 aa4.79□□□□□ -1.64
SNHG1-210ENST00000539303 HTR3BO95264 441 aa4.79□□□□□ -1.64
SNHG1-210ENST00000539303 GIPRP48546 466 aa4.79□□□□□ -1.64
SNHG1-210ENST00000539303 ZNF165P49910 485 aa4.79□□□□□ -1.64
SNHG1-210ENST00000539303 EIF6P56537 245 aaKnown RBP4.79□□□□□ -1.64
SNHG1-210ENST00000539303 COL9A2Q14055 689 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-210ENST00000539303 LINC00114Q6XXX2 140 aa4.79□□□□□ -1.64
SNHG1-210ENST00000539303 CKAP2LQ8IYA6 745 aa4.79□□□□□ -1.64
SNHG1-210ENST00000539303 FMR1NBQ8N0W7 255 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-210ENST00000539303 FAM177A1Q8N128 213 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-210ENST00000539303 CELF2-AS1Q8N7Q2 184 aa4.79□□□□□ -1.64
SNHG1-210ENST00000539303 NEDD1Q8NHV4 660 aa4.79□□□□□ -1.64
SNHG1-210ENST00000539303 HIRIP3Q9BW71 556 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-210ENST00000539303 OSBPL2Q9H1P3 480 aa4.79□□□□□ -1.64
SNHG1-210ENST00000539303 TNKS2Q9H2K2 1166 aa4.79□□□□□ -1.64
SNHG1-210ENST00000539303 KRT82Q9NSB4 513 aa4.79□□□□□ -1.64
SNHG1-210ENST00000539303 PRKAG3Q9UGI9 489 aa4.79□□□□□ -1.64
SNHG1-210ENST00000539303 PPP1R9AQ9ULJ8 1098 aa4.79□□□□□ -1.64
SNHG1-210ENST00000539303 STRIP2Q9ULQ0 834 aa4.79□□□□□ -1.64
SNHG1-210ENST00000539303 KIF4BQ2VIQ3 1234 aa4.78□□□□□ -1.64
SNHG1-210ENST00000539303 AKAP4Q5JQC9 854 aa4.78□□□□□ -1.64
SNHG1-210ENST00000539303 PPM1JQ5JR12 505 aa4.78□□□□□ -1.64
SNHG1-210ENST00000539303 CYFIP1Q7L576 1253 aa4.78□□□□□ -1.64
SNHG1-210ENST00000539303 UBE3DQ7Z6J8 389 aa4.78□□□□□ -1.64
SNHG1-210ENST00000539303 REXO1Q8N1G1 1221 aaKnown RBP4.78□□□□□ -1.64
SNHG1-210ENST00000539303 MICAL1Q8TDZ2 1067 aa4.78□□□□□ -1.64
SNHG1-210ENST00000539303 ELMO3Q96BJ8 720 aa4.78□□□□□ -1.64
SNHG1-210ENST00000539303 PLVAPQ9BX97 442 aa4.78□□□□□ -1.64
SNHG1-210ENST00000539303 EHMT1Q9H9B1 1298 aa4.78□□□□□ -1.64
SNHG1-210ENST00000539303 ST7Q9NRC1 585 aa4.78□□□□□ -1.64
SNHG1-210ENST00000539303 HIF3AQ9Y2N7 669 aa4.78□□□□□ -1.64
SNHG1-210ENST00000539303 FAM86C2PA6NEL3 165 aa4.77□□□□□ -1.65
SNHG1-210ENST00000539303 CCDC85CA6NKD9 419 aa4.77□□□□□ -1.65
SNHG1-210ENST00000539303 TMPRSS2O15393 492 aa4.77□□□□□ -1.65
SNHG1-210ENST00000539303 ARHGEF15O94989 841 aa4.77□□□□□ -1.65
SNHG1-210ENST00000539303 LORP23490 312 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-210ENST00000539303 DUOXA2Q1HG44 320 aa4.77□□□□□ -1.65
SNHG1-210ENST00000539303 ZC3H12AQ5D1E8 599 aaKnown RBP4.77□□□□□ -1.65
SNHG1-210ENST00000539303 SHISA2Q6UWI4 295 aa4.77□□□□□ -1.65
SNHG1-210ENST00000539303 KIAA1211Q6ZU35 1233 aa4.77□□□□□ -1.65
SNHG1-210ENST00000539303 JAZF1Q86VZ6 243 aa4.77□□□□□ -1.65
SNHG1-210ENST00000539303 FBXO11Q86XK2 927 aa4.77□□□□□ -1.65
SNHG1-210ENST00000539303 AGGF1Q8N302 714 aaeCLIP4.77□□□□□ -1.65
SNHG1-210ENST00000539303 REV1Q9UBZ9 1251 aa4.77□□□□□ -1.65
SNHG1-210ENST00000539303 CDK11AQ9UQ88 783 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-210ENST00000539303 PRR36Q9H6K5 1346 aa4.76□□□□□ -1.65
SNHG1-210ENST00000539303 FAM221BA6H8Z2 402 aa4.76□□□□□ -1.65
SNHG1-210ENST00000539303 UPK3BL1B0FP48 263 aa4.76□□□□□ -1.65
SNHG1-210ENST00000539303 B2RBV5 119 aa4.76□□□□□ -1.65
SNHG1-210ENST00000539303 UPK3BL2E5RIL1 263 aa4.76□□□□□ -1.65
SNHG1-210ENST00000539303 K7ELQ4 463 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-210ENST00000539303 ATE1O95260 518 aa4.76□□□□□ -1.65
SNHG1-210ENST00000539303 DRD2P14416 443 aa4.76□□□□□ -1.65
SNHG1-210ENST00000539303 GRK4P32298 578 aa4.76□□□□□ -1.65
SNHG1-210ENST00000539303 NTF4P34130 210 aa4.76□□□□□ -1.65
SNHG1-210ENST00000539303 RING1Q06587 406 aa4.76□□□□□ -1.65
SNHG1-210ENST00000539303 RAB33AQ14088 237 aa4.76□□□□□ -1.65
SNHG1-210ENST00000539303 ZYXQ15942 572 aaKnown RBP4.76□□□□□ -1.65
SNHG1-210ENST00000539303 SCARA3Q6AZY7 606 aa4.76□□□□□ -1.65
SNHG1-210ENST00000539303 OVOS1Q6IE37 1185 aa4.76□□□□□ -1.65
SNHG1-210ENST00000539303 ACAD11Q709F0 780 aa4.76□□□□□ -1.65
SNHG1-210ENST00000539303 RUSC1Q9BVN2 902 aa4.76□□□□□ -1.65
SNHG1-210ENST00000539303 TMPRSS13Q9BYE2 586 aa4.76□□□□□ -1.65
SNHG1-210ENST00000539303 FBRSQ9HAH7 460 aa4.76□□□□□ -1.65
SNHG1-210ENST00000539303 KLHL3Q9UH77 587 aa4.76□□□□□ -1.65
SNHG1-210ENST00000539303 CHURC1-FNTBB4DL54 471 aa4.75□□□□□ -1.65
SNHG1-210ENST00000539303 ALX3O95076 343 aa4.75□□□□□ -1.65
SNHG1-210ENST00000539303 PGRP06401 933 aa4.75□□□□□ -1.65
SNHG1-210ENST00000539303 NEFMP07197 916 aa4.75□□□□□ -1.65
SNHG1-210ENST00000539303 ACRP10323 421 aa4.75□□□□□ -1.65
SNHG1-210ENST00000539303 PLCG1P19174 1290 aa4.75□□□□□ -1.65
SNHG1-210ENST00000539303 POLR2BP30876 1174 aaKnown RBP4.75□□□□□ -1.65
SNHG1-210ENST00000539303 ID3Q02535 119 aa4.75□□□□□ -1.65
SNHG1-210ENST00000539303 RASA3Q14644 834 aa4.75□□□□□ -1.65
SNHG1-210ENST00000539303 GRIK4Q16099 956 aa4.75□□□□□ -1.65
SNHG1-210ENST00000539303 PPP2R5EQ16537 467 aa4.75□□□□□ -1.65
SNHG1-210ENST00000539303 LARP1BQ659C4 914 aaKnown RBP4.75□□□□□ -1.65
SNHG1-210ENST00000539303 HDXQ7Z353 690 aa4.75□□□□□ -1.65
SNHG1-210ENST00000539303 MAP4K3Q8IVH8 894 aa4.75□□□□□ -1.65
SNHG1-210ENST00000539303 NLGN1Q8N2Q7 840 aa4.75□□□□□ -1.65
SNHG1-210ENST00000539303 DTWD1Q8N5C7 304 aa4.75□□□□□ -1.65
SNHG1-210ENST00000539303 RBBP8NLQ8NC74 664 aaPredicted RBP4.75□□□□□ -1.65
SNHG1-210ENST00000539303 ACSF2Q96CM8 615 aaPredicted RBP4.75□□□□□ -1.65
SNHG1-210ENST00000539303 CRBNQ96SW2 442 aa4.75□□□□□ -1.65
SNHG1-210ENST00000539303 DPH2Q9BQC3 489 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms