RNA–Protein interactions for RNA: ENST00000539254.1

CELF1-219, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 4

Gene CELF1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-219ENST00000539254 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.77□□□□□ -0.53
CELF1-219ENST00000539254 SH3BP5LQ7L8J4 393 aa11.77□□□□□ -0.53
CELF1-219ENST00000539254 TGFBRAP1Q8WUH2 860 aa11.77□□□□□ -0.53
CELF1-219ENST00000539254 OPTNQ96CV9 577 aa11.77□□□□□ -0.53
CELF1-219ENST00000539254 ZNF341Q9BYN7 854 aa11.77□□□□□ -0.53
CELF1-219ENST00000539254 AKAP11Q9UKA4 1901 aa11.77□□□□□ -0.53
CELF1-219ENST00000539254 MYO5AQ9Y4I1 1855 aaKnown RBP11.76□□□□□ -0.53
CELF1-219ENST00000539254 PCNTO95613 3336 aa11.76□□□□□ -0.53
CELF1-219ENST00000539254 FAM196BA6NMK8 535 aa11.76□□□□□ -0.53
CELF1-219ENST00000539254 ENTPD3O75355 529 aa11.76□□□□□ -0.53
CELF1-219ENST00000539254 TBC1D8O95759 1140 aa11.76□□□□□ -0.53
CELF1-219ENST00000539254 SLFNL1Q499Z3 407 aa11.76□□□□□ -0.53
CELF1-219ENST00000539254 ANKRD45Q5TZF3 282 aa11.76□□□□□ -0.53
CELF1-219ENST00000539254 MAPKAPK5Q8IW41 473 aa11.76□□□□□ -0.53
CELF1-219ENST00000539254 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.76□□□□□ -0.53
CELF1-219ENST00000539254 HOOK2Q96ED9 719 aa11.76□□□□□ -0.53
CELF1-219ENST00000539254 OTUD5Q96G74 571 aa11.76□□□□□ -0.53
CELF1-219ENST00000539254 IDI2Q9BXS1 227 aa11.76□□□□□ -0.53
CELF1-219ENST00000539254 ZBTB47Q9UFB7 747 aaPredicted RBP11.76□□□□□ -0.53
CELF1-219ENST00000539254 SAP30BPQ9UHR5 308 aaKnown RBP11.76□□□□□ -0.53
CELF1-219ENST00000539254 MAP4K4O95819 1239 aaPredicted RBP11.75□□□□□ -0.53
CELF1-219ENST00000539254 USP5P45974 858 aa11.75□□□□□ -0.53
CELF1-219ENST00000539254 TTF1Q15361 905 aaPredicted RBP11.75□□□□□ -0.53
CELF1-219ENST00000539254 SLC9C2Q5TAH2 1124 aa11.75□□□□□ -0.53
CELF1-219ENST00000539254 TNS4Q8IZW8 715 aa11.75□□□□□ -0.53
CELF1-219ENST00000539254 PAG1Q9NWQ8 432 aa11.75□□□□□ -0.53
CELF1-219ENST00000539254 THSD7BQ9C0I4 1608 aa11.75□□□□□ -0.53
CELF1-219ENST00000539254 CHGBP05060 677 aa11.74□□□□□ -0.53
CELF1-219ENST00000539254 ATP5JP18859 108 aa11.74□□□□□ -0.53
CELF1-219ENST00000539254 SREBF2Q12772 1141 aa11.74□□□□□ -0.53
CELF1-219ENST00000539254 B4GALNT3Q6L9W6 998 aa11.74□□□□□ -0.53
CELF1-219ENST00000539254 OTUD7AQ8TE49 926 aaPredicted RBP11.74□□□□□ -0.53
CELF1-219ENST00000539254 OSBPL5Q9H0X9 879 aaPredicted RBP11.74□□□□□ -0.53
CELF1-219ENST00000539254 SNCAIPQ9Y6H5 919 aa11.74□□□□□ -0.53
CELF1-219ENST00000539254 MANSC4A6NHS7 340 aaPredicted RBP11.73□□□□□ -0.53
CELF1-219ENST00000539254 CA12O43570 354 aa11.73□□□□□ -0.53
CELF1-219ENST00000539254 CAPN15O75808 1086 aa11.73□□□□□ -0.53
CELF1-219ENST00000539254 PDE6AP16499 860 aa11.73□□□□□ -0.53
CELF1-219ENST00000539254 PLCG2P16885 1265 aa11.73□□□□□ -0.53
CELF1-219ENST00000539254 TM4SF4P48230 202 aa11.73□□□□□ -0.53
CELF1-219ENST00000539254 CCDC84Q86UT8 332 aaPredicted RBP11.73□□□□□ -0.53
CELF1-219ENST00000539254 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.73□□□□□ -0.53
CELF1-219ENST00000539254 GPATCH3Q96I76 525 aa11.73□□□□□ -0.53
CELF1-219ENST00000539254 HAUS7Q99871 368 aa11.73□□□□□ -0.53
CELF1-219ENST00000539254 RPAP1Q9BWH6 1393 aaPredicted RBP11.73□□□□□ -0.53
CELF1-219ENST00000539254 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.73□□□□□ -0.53
CELF1-219ENST00000539254 ZNF532Q9HCE3 1301 aa11.73□□□□□ -0.53
CELF1-219ENST00000539254 PRDM10Q9NQV6 1147 aa11.73□□□□□ -0.53
CELF1-219ENST00000539254 ECHDC1Q9NTX5 307 aa11.73□□□□□ -0.53
CELF1-219ENST00000539254 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.73□□□□□ -0.53
CELF1-219ENST00000539254 RFX7Q2KHR2 1363 aa11.72□□□□□ -0.53
CELF1-219ENST00000539254 MAGEB6P1A0A0J9YX57 407 aa11.72□□□□□ -0.53
CELF1-219ENST00000539254 ZBTB48P10074 688 aaPredicted RBP11.72□□□□□ -0.53
CELF1-219ENST00000539254 PPP4CP60510 307 aa11.72□□□□□ -0.53
CELF1-219ENST00000539254 IFNL1Q8IU54 200 aa11.72□□□□□ -0.53
CELF1-219ENST00000539254 REM2Q8IYK8 340 aaPredicted RBP11.72□□□□□ -0.53
CELF1-219ENST00000539254 R3HDMLQ9H3Y0 253 aa11.72□□□□□ -0.53
CELF1-219ENST00000539254 PALD1Q9ULE6 856 aa11.72□□□□□ -0.53
CELF1-219ENST00000539254 OTOFQ9HC10 1997 aa11.72□□□□□ -0.53
CELF1-219ENST00000539254 FLT1P17948 1338 aa11.71□□□□□ -0.53
CELF1-219ENST00000539254 CCL15-CCL14A0A0B4J2E2 113 aa11.71□□□□□ -0.53
CELF1-219ENST00000539254 SPDYE5A6NIY4 337 aa11.71□□□□□ -0.53
CELF1-219ENST00000539254 UNCXA6NJT0 531 aa11.71□□□□□ -0.53
CELF1-219ENST00000539254 IGF2BP3O00425 579 aaKnown RBP eCLIP11.71□□□□□ -0.53
CELF1-219ENST00000539254 IRF6O14896 467 aa11.71□□□□□ -0.53
CELF1-219ENST00000539254 IGHDP01880 384 aa11.71□□□□□ -0.53
CELF1-219ENST00000539254 CCL15Q16663 113 aa11.71□□□□□ -0.53
CELF1-219ENST00000539254 ERO1BQ86YB8 467 aa11.71□□□□□ -0.53
CELF1-219ENST00000539254 CRACR2BQ8N4Y2 399 aaPredicted RBP11.71□□□□□ -0.53
CELF1-219ENST00000539254 PTPN18Q99952 460 aa11.71□□□□□ -0.53
CELF1-219ENST00000539254 TRIM34Q9BYJ4 488 aa11.71□□□□□ -0.53
CELF1-219ENST00000539254 RWDD1Q9H446 243 aaPredicted RBP11.71□□□□□ -0.53
CELF1-219ENST00000539254 ARMT1Q9H993 441 aa11.71□□□□□ -0.53
CELF1-219ENST00000539254 PICK1Q9NRD5 415 aa11.71□□□□□ -0.53
CELF1-219ENST00000539254 ZNF112Q9UJU3 913 aa11.71□□□□□ -0.53
CELF1-219ENST00000539254 CASP8AP2Q9UKL3 1982 aa11.7□□□□□ -0.54
CELF1-219ENST00000539254 MAST2Q6P0Q8 1798 aa11.7□□□□□ -0.54
CELF1-219ENST00000539254 PHF20L1A8MW92 1017 aa11.7□□□□□ -0.54
CELF1-219ENST00000539254 ECM2O94769 699 aaPredicted RBP11.7□□□□□ -0.54
CELF1-219ENST00000539254 ADD2P35612 726 aa11.7□□□□□ -0.54
CELF1-219ENST00000539254 GTF2A2P52657 109 aa11.7□□□□□ -0.54
CELF1-219ENST00000539254 HDAC1Q13547 482 aaPredicted RBP11.7□□□□□ -0.54
CELF1-219ENST00000539254 LCORLQ8N3X6 602 aa11.7□□□□□ -0.54
CELF1-219ENST00000539254 BRI3BPQ8WY22 251 aa11.7□□□□□ -0.54
CELF1-219ENST00000539254 MS4A4AQ96JQ5 239 aa11.7□□□□□ -0.54
CELF1-219ENST00000539254 LNPKQ9C0E8 428 aa11.7□□□□□ -0.54
CELF1-219ENST00000539254 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.7□□□□□ -0.542e-7■■■■■ 32.2
CELF1-219ENST00000539254 SAGE1Q9NXZ1 904 aa11.7□□□□□ -0.54
CELF1-219ENST00000539254 ZHX2Q9Y6X8 837 aa11.7□□□□□ -0.54
CELF1-219ENST00000539254 ATRNL1Q5VV63 1379 aa11.69□□□□□ -0.54
CELF1-219ENST00000539254 TCRBV5S4A2TA0A5A2 114 aa11.69□□□□□ -0.54
CELF1-219ENST00000539254 PRKAB2O43741 272 aa11.69□□□□□ -0.54
CELF1-219ENST00000539254 NPM3O75607 178 aaKnown RBP11.69□□□□□ -0.54
CELF1-219ENST00000539254 MBD4O95243 580 aa11.69□□□□□ -0.54
CELF1-219ENST00000539254 POLR3DP05423 398 aaPredicted RBP11.69□□□□□ -0.54
CELF1-219ENST00000539254 HLA-DOAP06340 250 aa11.69□□□□□ -0.54
CELF1-219ENST00000539254 INHBEP58166 350 aa11.69□□□□□ -0.54
CELF1-219ENST00000539254 PPIL2Q13356 520 aa11.69□□□□□ -0.54
CELF1-219ENST00000539254 RRP1BQ14684 758 aaKnown RBP11.69□□□□□ -0.54
CELF1-219ENST00000539254 OTUD7BQ6GQQ9 843 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms