RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 PPARAQ07869 468 aa18.26■□□□□ 0.51
VAMP1-207ENST00000539047 DLGAP5Q15398 846 aa18.26■□□□□ 0.51
VAMP1-207ENST00000539047 CFAP100Q494V2 611 aa18.26■□□□□ 0.51
VAMP1-207ENST00000539047 RUFY3Q7L099 469 aa18.26■□□□□ 0.51
VAMP1-207ENST00000539047 TGFBRAP1Q8WUH2 860 aa18.26■□□□□ 0.51
VAMP1-207ENST00000539047 UPF3BQ9BZI7 483 aaKnown RBP18.26■□□□□ 0.51
VAMP1-207ENST00000539047 MCM9Q9NXL9 1143 aa18.26■□□□□ 0.51
VAMP1-207ENST00000539047 GJA3Q9Y6H8 435 aa18.26■□□□□ 0.51
VAMP1-207ENST00000539047 POLR3DP05423 398 aaPredicted RBP18.25■□□□□ 0.51
VAMP1-207ENST00000539047 ANKRD1Q15327 319 aa18.25■□□□□ 0.51
VAMP1-207ENST00000539047 MFSD6Q6ZSS7 791 aa18.25■□□□□ 0.51
VAMP1-207ENST00000539047 KRT23Q9C075 422 aa18.25■□□□□ 0.51
VAMP1-207ENST00000539047 ZSWIM6Q9HCJ5 1215 aa18.25■□□□□ 0.51
VAMP1-207ENST00000539047 RNF181Q9P0P0 153 aa18.25■□□□□ 0.51
VAMP1-207ENST00000539047 RPS6KB1P23443 525 aa18.24■□□□□ 0.51
VAMP1-207ENST00000539047 RHBDL3P58872 404 aa18.24■□□□□ 0.51
VAMP1-207ENST00000539047 ADCK5Q3MIX3 580 aa18.24■□□□□ 0.51
VAMP1-207ENST00000539047 SBK1Q52WX2 424 aa18.24■□□□□ 0.51
VAMP1-207ENST00000539047 AKNAD1Q5T1N1 836 aa18.24■□□□□ 0.51
VAMP1-207ENST00000539047 MAPKAPK5Q8IW41 473 aa18.24■□□□□ 0.51
VAMP1-207ENST00000539047 GMLQ99445 158 aa18.24■□□□□ 0.51
VAMP1-207ENST00000539047 ZNF287Q9HBT7 754 aa18.24■□□□□ 0.51
VAMP1-207ENST00000539047 TOMM22Q9NS69 142 aa18.24■□□□□ 0.51
VAMP1-207ENST00000539047 PDRG1Q9NUG6 133 aa18.24■□□□□ 0.51
VAMP1-207ENST00000539047 ANAPC4Q9UJX5 808 aa18.24■□□□□ 0.51
VAMP1-207ENST00000539047 ZBTB12Q9Y330 459 aaPredicted RBP18.24■□□□□ 0.51
VAMP1-207ENST00000539047 FLT1P17948 1338 aa18.23■□□□□ 0.51
VAMP1-207ENST00000539047 USP17L12C9JPN9 530 aa18.23■□□□□ 0.51
VAMP1-207ENST00000539047 USP17L21D6R901 530 aa18.23■□□□□ 0.51
VAMP1-207ENST00000539047 HSP90AA1P07900 732 aaKnown RBP18.23■□□□□ 0.51
VAMP1-207ENST00000539047 NT5C2P49902 561 aa18.23■□□□□ 0.51
VAMP1-207ENST00000539047 PDE4BQ07343 736 aa18.23■□□□□ 0.51
VAMP1-207ENST00000539047 CDC42EP5Q6NZY7 148 aa18.23■□□□□ 0.51
VAMP1-207ENST00000539047 STAG1Q8WVM7 1258 aa18.23■□□□□ 0.51
VAMP1-207ENST00000539047 K7ELQ4 463 aaPredicted RBP18.22■□□□□ 0.51
VAMP1-207ENST00000539047 HLA-DOAP06340 250 aa18.22■□□□□ 0.51
VAMP1-207ENST00000539047 MCM5P33992 734 aa18.22■□□□□ 0.51
VAMP1-207ENST00000539047 C1QTNF8P60827 252 aa18.22■□□□□ 0.51
VAMP1-207ENST00000539047 CTDSPL2Q05D32 466 aa18.22■□□□□ 0.51
VAMP1-207ENST00000539047 PICALMQ13492 652 aa18.22■□□□□ 0.51
VAMP1-207ENST00000539047 APOBEC3HQ6NTF7 200 aaKnown RBP18.22■□□□□ 0.51
VAMP1-207ENST00000539047 CTR9Q6PD62 1173 aa18.22■□□□□ 0.51
VAMP1-207ENST00000539047 DHX32Q7L7V1 743 aaKnown RBP18.22■□□□□ 0.51
VAMP1-207ENST00000539047 GPC2Q8N158 579 aa18.22■□□□□ 0.51
VAMP1-207ENST00000539047 DPF2Q92785 391 aa18.22■□□□□ 0.51
VAMP1-207ENST00000539047 WDR19Q8NEZ3 1342 aa18.22■□□□□ 0.51
VAMP1-207ENST00000539047 ZNF541Q9H0D2 1346 aa18.22■□□□□ 0.51
VAMP1-207ENST00000539047 ROBO3Q96MS0 1386 aa18.21■□□□□ 0.51
VAMP1-207ENST00000539047 SPDYE2BA6NHP3 402 aa18.21■□□□□ 0.51
VAMP1-207ENST00000539047 SPDYE6P0CI01 402 aa18.21■□□□□ 0.51
VAMP1-207ENST00000539047 GMPSP49915 693 aaPredicted RBP18.21■□□□□ 0.51
VAMP1-207ENST00000539047 SART3Q15020 963 aaKnown RBP18.21■□□□□ 0.51
VAMP1-207ENST00000539047 TTC6Q86TZ1 520 aa18.21■□□□□ 0.51
VAMP1-207ENST00000539047 TBC1D10CQ8IV04 446 aa18.21■□□□□ 0.51
VAMP1-207ENST00000539047 MTMR14Q8NCE2 650 aa18.21■□□□□ 0.51
VAMP1-207ENST00000539047 TBC1D2Q9BYX2 928 aa18.21■□□□□ 0.51
VAMP1-207ENST00000539047 ZC3H4Q9UPT8 1303 aaKnown RBP18.21■□□□□ 0.51
VAMP1-207ENST00000539047 H7C1D1 291 aa18.2■□□□□ 0.5
VAMP1-207ENST00000539047 PRELPP51888 382 aa18.2■□□□□ 0.5
VAMP1-207ENST00000539047 RRP12Q5JTH9 1297 aaKnown RBP18.2■□□□□ 0.5
VAMP1-207ENST00000539047 C9orf131Q5VYM1 1079 aa18.2■□□□□ 0.5
VAMP1-207ENST00000539047 STOX1Q6ZVD7 989 aa18.2■□□□□ 0.5
VAMP1-207ENST00000539047 ESR2Q92731 530 aa18.2■□□□□ 0.5
VAMP1-207ENST00000539047 TRIM34Q9BYJ4 488 aa18.2■□□□□ 0.5
VAMP1-207ENST00000539047 MYOZ2Q9NPC6 264 aa18.2■□□□□ 0.5
VAMP1-207ENST00000539047 SAP30BPQ9UHR5 308 aaKnown RBP18.2■□□□□ 0.5
VAMP1-207ENST00000539047 TAF6LQ9Y6J9 622 aa18.2■□□□□ 0.5
VAMP1-207ENST00000539047 COL2A1P02458 1487 aaPredicted RBP18.2■□□□□ 0.5
VAMP1-207ENST00000539047 NPM3O75607 178 aaKnown RBP18.19■□□□□ 0.5
VAMP1-207ENST00000539047 WDHD1O75717 1129 aaPredicted RBP18.19■□□□□ 0.5
VAMP1-207ENST00000539047 LMOD1P29536 600 aaPredicted RBP18.19■□□□□ 0.5
VAMP1-207ENST00000539047 ZNF280AP59817 542 aaPredicted RBP18.19■□□□□ 0.5
VAMP1-207ENST00000539047 C12orf60Q5U649 245 aa18.19■□□□□ 0.5
VAMP1-207ENST00000539047 MICALL2Q8IY33 904 aa18.19■□□□□ 0.5
VAMP1-207ENST00000539047 IDI2Q9BXS1 227 aa18.19■□□□□ 0.5
VAMP1-207ENST00000539047 OSBPL5Q9H0X9 879 aaPredicted RBP18.19■□□□□ 0.5
VAMP1-207ENST00000539047 DHX36Q9H2U1 1008 aaKnown RBP18.19■□□□□ 0.5
VAMP1-207ENST00000539047 NEDD4P46934 1319 aa18.19■□□□□ 0.5
VAMP1-207ENST00000539047 ERICH2A1L162 156 aa18.18■□□□□ 0.5
VAMP1-207ENST00000539047 PRC1O43663 620 aa18.18■□□□□ 0.5
VAMP1-207ENST00000539047 CPA1P15085 419 aa18.18■□□□□ 0.5
VAMP1-207ENST00000539047 TNNI2P48788 182 aa18.18■□□□□ 0.5
VAMP1-207ENST00000539047 AK2P54819 239 aa18.18■□□□□ 0.5
VAMP1-207ENST00000539047 DPY19L2Q6NUT2 758 aa18.18■□□□□ 0.5
VAMP1-207ENST00000539047 NOL8Q76FK4 1167 aaKnown RBP18.18■□□□□ 0.5
VAMP1-207ENST00000539047 ZSCAN29Q8IWY8 852 aaPredicted RBP18.18■□□□□ 0.5
VAMP1-207ENST00000539047 ZNF526Q8TF50 670 aaPredicted RBP18.18■□□□□ 0.5
VAMP1-207ENST00000539047 ZSCAN31Q96LW9 406 aaPredicted RBP18.18■□□□□ 0.5
VAMP1-207ENST00000539047 TTC14Q96N46 770 aa18.18■□□□□ 0.5
VAMP1-207ENST00000539047 NBPF3Q9H094 633 aa18.18■□□□□ 0.5
VAMP1-207ENST00000539047 ALDH8A1Q9H2A2 487 aaPredicted RBP18.18■□□□□ 0.5
VAMP1-207ENST00000539047 TDRD3Q9H7E2 651 aaKnown RBP18.18■□□□□ 0.5
VAMP1-207ENST00000539047 MKRN1Q9UHC7 482 aaKnown RBP18.18■□□□□ 0.5
VAMP1-207ENST00000539047 TAOK2Q9UL54 1235 aa18.18■□□□□ 0.5
VAMP1-207ENST00000539047 B4E1Z4 1266 aa18.17■□□□□ 0.5
VAMP1-207ENST00000539047 ENTPD3O75355 529 aa18.17■□□□□ 0.5
VAMP1-207ENST00000539047 TNFAIP1Q13829 316 aa18.17■□□□□ 0.5
VAMP1-207ENST00000539047 MB21D2Q8IYB1 491 aaPredicted RBP18.17■□□□□ 0.5
VAMP1-207ENST00000539047 TMEM87BQ96K49 555 aa18.17■□□□□ 0.5
VAMP1-207ENST00000539047 UBAC1Q9BSL1 405 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms