RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 PGAP2Q9UHJ9 254 aa20.6■□□□□ 0.89
CLN6-202ENST00000538696 SCAF8Q9UPN6 1271 aaKnown RBP20.6■□□□□ 0.89
CLN6-202ENST00000538696 SLC4A4Q9Y6R1 1079 aa20.6■□□□□ 0.89
CLN6-202ENST00000538696 FLT1P17948 1338 aa20.59■□□□□ 0.89
CLN6-202ENST00000538696 TCP10L2B9ZVM9 353 aa20.59■□□□□ 0.89
CLN6-202ENST00000538696 KIF3CO14782 793 aa20.59■□□□□ 0.89
CLN6-202ENST00000538696 PICALMQ13492 652 aa20.59■□□□□ 0.89
CLN6-202ENST00000538696 FKBP1CQ5VVH2 108 aa20.59■□□□□ 0.89
CLN6-202ENST00000538696 APOBEC3FQ8IUX4 373 aaKnown RBP20.59■□□□□ 0.89
CLN6-202ENST00000538696 ZNF784Q8NCA9 323 aaPredicted RBP20.59■□□□□ 0.89
CLN6-202ENST00000538696 DDRGK1Q96HY6 314 aa20.59■□□□□ 0.89
CLN6-202ENST00000538696 IPO9Q96P70 1041 aaKnown RBP20.59■□□□□ 0.89
CLN6-202ENST00000538696 GNAT2P19087 354 aa20.58■□□□□ 0.89
CLN6-202ENST00000538696 USP5P45974 858 aa20.58■□□□□ 0.89
CLN6-202ENST00000538696 LDHDQ86WU2 507 aa20.58■□□□□ 0.89
CLN6-202ENST00000538696 KIF2CQ99661 725 aa20.58■□□□□ 0.89
CLN6-202ENST00000538696 LSG1Q9H089 658 aaKnown RBP20.58■□□□□ 0.89
CLN6-202ENST00000538696 EPB41L4AQ9HCS5 686 aaPredicted RBP20.58■□□□□ 0.89
CLN6-202ENST00000538696 COL2A1P02458 1487 aaPredicted RBP20.58■□□□□ 0.88
CLN6-202ENST00000538696 GSG1L2A8MUP6 293 aa20.57■□□□□ 0.88
CLN6-202ENST00000538696 NPM3O75607 178 aaKnown RBP20.57■□□□□ 0.88
CLN6-202ENST00000538696 ZFPM1Q8IX07 1006 aa20.57■□□□□ 0.88
CLN6-202ENST00000538696 OSBPL5Q9H0X9 879 aaPredicted RBP20.57■□□□□ 0.88
CLN6-202ENST00000538696 DCP1AQ9NPI6 582 aaPredicted RBP20.57■□□□□ 0.88
CLN6-202ENST00000538696 MKRN1Q9UHC7 482 aaKnown RBP20.57■□□□□ 0.88
CLN6-202ENST00000538696 CLEC11AQ9Y240 323 aa20.57■□□□□ 0.88
CLN6-202ENST00000538696 RPAP1Q9BWH6 1393 aaPredicted RBP20.57■□□□□ 0.88
CLN6-202ENST00000538696 ENTPD3O75355 529 aa20.56■□□□□ 0.88
CLN6-202ENST00000538696 HSPD1P10809 573 aaKnown RBP20.56■□□□□ 0.88
CLN6-202ENST00000538696 TCP10Q12799 353 aa20.56■□□□□ 0.88
CLN6-202ENST00000538696 TNFAIP1Q13829 316 aa20.56■□□□□ 0.88
CLN6-202ENST00000538696 FAM83AQ86UY5 434 aa20.56■□□□□ 0.88
CLN6-202ENST00000538696 DCPSQ96C86 337 aaKnown RBP20.56■□□□□ 0.88
CLN6-202ENST00000538696 ATP8A2Q9NTI2 1148 aa20.56■□□□□ 0.88
CLN6-202ENST00000538696 PATL2C9JE40 543 aaKnown RBP20.55■□□□□ 0.88
CLN6-202ENST00000538696 ADM5C9JUS6 153 aa20.55■□□□□ 0.88
CLN6-202ENST00000538696 FAM151AQ8WW52 585 aa20.55■□□□□ 0.88
CLN6-202ENST00000538696 MYH8P13535 1937 aa20.55■□□□□ 0.88
CLN6-202ENST00000538696 TNNI2P48788 182 aa20.54■□□□□ 0.88
CLN6-202ENST00000538696 PTH1RQ03431 593 aa20.54■□□□□ 0.88
CLN6-202ENST00000538696 RASA3Q14644 834 aa20.54■□□□□ 0.88
CLN6-202ENST00000538696 MAP1SQ66K74 1059 aaPredicted RBP20.54■□□□□ 0.88
CLN6-202ENST00000538696 SH3BP5LQ7L8J4 393 aa20.54■□□□□ 0.88
CLN6-202ENST00000538696 CDAN1Q8IWY9 1227 aa20.54■□□□□ 0.88
CLN6-202ENST00000538696 IFNL3Q8IZI9 196 aa20.54■□□□□ 0.88
CLN6-202ENST00000538696 TMEM39BQ9GZU3 492 aa20.54■□□□□ 0.88
CLN6-202ENST00000538696 DEFB129Q9H1M3 183 aa20.54■□□□□ 0.88
CLN6-202ENST00000538696 SAP30BPQ9UHR5 308 aaKnown RBP20.54■□□□□ 0.88
CLN6-202ENST00000538696 ATRNL1Q5VV63 1379 aa20.54■□□□□ 0.88
CLN6-202ENST00000538696 TRPM7Q96QT4 1865 aa20.54■□□□□ 0.88
CLN6-202ENST00000538696 EPB41L2O43491 1005 aaKnown RBP20.53■□□□□ 0.88
CLN6-202ENST00000538696 APPP05067 770 aa20.53■□□□□ 0.88
CLN6-202ENST00000538696 GIMAP6Q6P9H5 292 aa20.53■□□□□ 0.88
CLN6-202ENST00000538696 KIAA1211Q6ZU35 1233 aa20.53■□□□□ 0.88
CLN6-202ENST00000538696 KRT26Q7Z3Y9 468 aa20.53■□□□□ 0.88
CLN6-202ENST00000538696 SULF1Q8IWU6 871 aa20.53■□□□□ 0.88
CLN6-202ENST00000538696 TEPSINQ96N21 525 aa20.53■□□□□ 0.88
CLN6-202ENST00000538696 DSCC1Q9BVC3 393 aa20.53■□□□□ 0.88
CLN6-202ENST00000538696 GLIS2Q9BZE0 524 aaPredicted RBP20.53■□□□□ 0.88
CLN6-202ENST00000538696 SSC5DA1L4H1 1573 aa20.53■□□□□ 0.88
CLN6-202ENST00000538696 DDTLA6NHG4 134 aaPredicted RBP20.53■□□□□ 0.88
CLN6-202ENST00000538696 TDO2P48775 406 aa20.53■□□□□ 0.88
CLN6-202ENST00000538696 DLK2Q6UY11 383 aa20.53■□□□□ 0.88
CLN6-202ENST00000538696 USP48Q86UV5 1035 aa20.53■□□□□ 0.88
CLN6-202ENST00000538696 MCM9Q9NXL9 1143 aa20.53■□□□□ 0.88
CLN6-202ENST00000538696 PALD1Q9ULE6 856 aa20.53■□□□□ 0.88
CLN6-202ENST00000538696 PPP2R3BQ9Y5P8 575 aa20.53■□□□□ 0.88
CLN6-202ENST00000538696 ZMYM6O95789 1325 aa20.52■□□□□ 0.88
CLN6-202ENST00000538696 CYP2D6P10635 497 aa20.52■□□□□ 0.87
CLN6-202ENST00000538696 MCCP23508 829 aa20.52■□□□□ 0.87
CLN6-202ENST00000538696 EVX2Q03828 476 aa20.52■□□□□ 0.87
CLN6-202ENST00000538696 ALX1Q15699 326 aa20.52■□□□□ 0.87
CLN6-202ENST00000538696 SLC4A8Q2Y0W8 1093 aa20.52■□□□□ 0.87
CLN6-202ENST00000538696 CHADLQ6NUI6 762 aa20.52■□□□□ 0.87
CLN6-202ENST00000538696 CDC37L1Q7L3B6 337 aa20.52■□□□□ 0.87
CLN6-202ENST00000538696 NACAP1Q9BZK3 213 aa20.52■□□□□ 0.87
CLN6-202ENST00000538696 NAPBQ9H115 298 aa20.52■□□□□ 0.87
CLN6-202ENST00000538696 HSPA4P34932 840 aa20.51■□□□□ 0.87
CLN6-202ENST00000538696 PRAMEF18Q5VWM3 479 aa20.51■□□□□ 0.87
CLN6-202ENST00000538696 CTR9Q6PD62 1173 aa20.51■□□□□ 0.87
CLN6-202ENST00000538696 ARPP21Q9UBL0 812 aaPredicted RBP20.51■□□□□ 0.87
CLN6-202ENST00000538696 PAPPA2Q9BXP8 1791 aa20.5■□□□□ 0.87
CLN6-202ENST00000538696 CYP2D7A0A087X1C5 515 aa20.5■□□□□ 0.87
CLN6-202ENST00000538696 USP17L12C9JPN9 530 aa20.5■□□□□ 0.87
CLN6-202ENST00000538696 USP17L21D6R901 530 aa20.5■□□□□ 0.87
CLN6-202ENST00000538696 FGAP02671 866 aa20.5■□□□□ 0.87
CLN6-202ENST00000538696 SBK1Q52WX2 424 aa20.5■□□□□ 0.87
CLN6-202ENST00000538696 ZSCAN29Q8IWY8 852 aaPredicted RBP20.5■□□□□ 0.87
CLN6-202ENST00000538696 MAP4K1Q92918 833 aa20.5■□□□□ 0.87
CLN6-202ENST00000538696 CDCA5Q96FF9 252 aa20.5■□□□□ 0.87
CLN6-202ENST00000538696 OTOFQ9HC10 1997 aa20.49■□□□□ 0.87
CLN6-202ENST00000538696 SMIM22K7EJ46 135 aa20.49■□□□□ 0.87
CLN6-202ENST00000538696 POLR3DP05423 398 aaPredicted RBP20.49■□□□□ 0.87
CLN6-202ENST00000538696 NBPF12Q5TAG4 269 aaPredicted RBP20.49■□□□□ 0.87
CLN6-202ENST00000538696 DHX36Q9H2U1 1008 aaKnown RBP20.49■□□□□ 0.87
CLN6-202ENST00000538696 RBM8AQ9Y5S9 174 aaKnown RBP20.49■□□□□ 0.87
CLN6-202ENST00000538696 ROBO3Q96MS0 1386 aa20.48■□□□□ 0.87
CLN6-202ENST00000538696 TRAF5O00463 557 aa20.48■□□□□ 0.87
CLN6-202ENST00000538696 SLC4A3P48751 1232 aa20.48■□□□□ 0.87
CLN6-202ENST00000538696 PLCD1P51178 756 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms