RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 LAMB2P55268 1798 aa28.88■■■□□ 2.21
RAB40C-204ENST00000538492 MROH7-TTC4A0A0A0MT08 1334 aa28.87■■■□□ 2.21
RAB40C-204ENST00000538492 ZNF202O95125 648 aa28.87■■■□□ 2.21
RAB40C-204ENST00000538492 SLC39A14Q15043 492 aa28.87■■■□□ 2.21
RAB40C-204ENST00000538492 AOPEPQ8N6M6 819 aa28.87■■■□□ 2.21
RAB40C-204ENST00000538492 KIAA1468Q9P260 1216 aa28.87■■■□□ 2.21
RAB40C-204ENST00000538492 PFKFB1P16118 471 aa28.87■■■□□ 2.21
RAB40C-204ENST00000538492 TRIM29Q14134 588 aa28.87■■■□□ 2.21
RAB40C-204ENST00000538492 CCDC144BQ3MJ40 725 aa28.87■■■□□ 2.21
RAB40C-204ENST00000538492 SDR42E1Q8WUS8 393 aa28.87■■■□□ 2.21
RAB40C-204ENST00000538492 RRP9O43818 475 aaKnown RBP28.86■■■□□ 2.21
RAB40C-204ENST00000538492 STAG1Q8WVM7 1258 aa28.86■■■□□ 2.21
RAB40C-204ENST00000538492 SMARCC1Q92922 1105 aaPredicted RBP28.86■■■□□ 2.21
RAB40C-204ENST00000538492 BCL9LQ86UU0 1499 aa28.86■■■□□ 2.21
RAB40C-204ENST00000538492 SARM1Q6SZW1 724 aa28.86■■■□□ 2.21
RAB40C-204ENST00000538492 ANKRD18AQ8IVF6 992 aa28.86■■■□□ 2.21
RAB40C-204ENST00000538492 LINC00116Q8NCU8 138 aa28.86■■■□□ 2.21
RAB40C-204ENST00000538492 FAM13BQ9NYF5 915 aa28.86■■■□□ 2.21
RAB40C-204ENST00000538492 RAI14Q9P0K7 980 aa28.86■■■□□ 2.21
RAB40C-204ENST00000538492 SSRP1Q08945 709 aaKnown RBP28.85■■■□□ 2.21
RAB40C-204ENST00000538492 CCDC82Q8N4S0 544 aa28.85■■■□□ 2.21
RAB40C-204ENST00000538492 BCORQ6W2J9 1755 aa28.85■■■□□ 2.21
RAB40C-204ENST00000538492 BIN1O00499 593 aa28.85■■■□□ 2.21
RAB40C-204ENST00000538492 CMA1P23946 247 aa28.85■■■□□ 2.21
RAB40C-204ENST00000538492 ZRSR1Q15695 479 aaKnown RBP28.85■■■□□ 2.21
RAB40C-204ENST00000538492 DPCR1Q3MIW9 517 aa28.85■■■□□ 2.21
RAB40C-204ENST00000538492 TIAM2Q8IVF5 1701 aa28.85■■■□□ 2.21
RAB40C-204ENST00000538492 NAT10Q9H0A0 1025 aaKnown RBP28.84■■■□□ 2.21
RAB40C-204ENST00000538492 MINDY4BA8MYZ0 360 aa28.84■■■□□ 2.21
RAB40C-204ENST00000538492 GUCY1A2P33402 732 aa28.84■■■□□ 2.21
RAB40C-204ENST00000538492 WTAPQ15007 396 aa28.84■■■□□ 2.21
RAB40C-204ENST00000538492 BARGINQ6ZT62 677 aa28.84■■■□□ 2.21
RAB40C-204ENST00000538492 CMTR1Q8N1G2 835 aaKnown RBP28.84■■■□□ 2.21
RAB40C-204ENST00000538492 SLC3A2P08195 630 aaKnown RBP28.83■■■□□ 2.21
RAB40C-204ENST00000538492 SART3Q15020 963 aaKnown RBP28.83■■■□□ 2.21
RAB40C-204ENST00000538492 SMIM22K7EJ46 135 aa28.83■■■□□ 2.21
RAB40C-204ENST00000538492 CDC25BP30305 580 aa28.83■■■□□ 2.21
RAB40C-204ENST00000538492 FAM98CQ17RN3 349 aaKnown RBP28.83■■■□□ 2.21
RAB40C-204ENST00000538492 CLEC4GQ6UXB4 293 aa28.83■■■□□ 2.21
RAB40C-204ENST00000538492 RGS22Q8NE09 1264 aa28.83■■■□□ 2.21
RAB40C-204ENST00000538492 CACTINQ8WUQ7 758 aaKnown RBP28.83■■■□□ 2.21
RAB40C-204ENST00000538492 PPARAQ07869 468 aa28.82■■■□□ 2.2
RAB40C-204ENST00000538492 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.82■■■□□ 2.2
RAB40C-204ENST00000538492 DYNC1I1O14576 645 aa28.82■■■□□ 2.2
RAB40C-204ENST00000538492 FMNL1O95466 1100 aaPredicted RBP28.82■■■□□ 2.2
RAB40C-204ENST00000538492 U2AF2P26368 475 aaKnown RBP eCLIP28.82■■■□□ 2.2
RAB40C-204ENST00000538492 MYRIPQ8NFW9 859 aa28.82■■■□□ 2.2
RAB40C-204ENST00000538492 MRFAP1L1Q96HT8 127 aa28.82■■■□□ 2.2
RAB40C-204ENST00000538492 COL5A3P25940 1745 aaPredicted RBP28.82■■■□□ 2.2
RAB40C-204ENST00000538492 ZNF804BA4D1E1 1349 aa28.82■■■□□ 2.2
RAB40C-204ENST00000538492 ERICH2A1L162 156 aa28.81■■■□□ 2.2
RAB40C-204ENST00000538492 GTF2E1P29083 439 aaPredicted RBP28.81■■■□□ 2.2
RAB40C-204ENST00000538492 PTPAQ15257 358 aa28.81■■■□□ 2.2
RAB40C-204ENST00000538492 PRIMPOLQ96LW4 560 aa28.81■■■□□ 2.2
RAB40C-204ENST00000538492 MAP3K14Q99558 947 aa28.81■■■□□ 2.2
RAB40C-204ENST00000538492 MAGEB6P1A0A0J9YX57 407 aa28.81■■■□□ 2.2
RAB40C-204ENST00000538492 IFNAR1P17181 557 aa28.81■■■□□ 2.2
RAB40C-204ENST00000538492 RTN1Q16799 776 aa28.81■■■□□ 2.2
RAB40C-204ENST00000538492 COL1A1P02452 1464 aaPredicted RBP28.8■■■□□ 2.2
RAB40C-204ENST00000538492 CICQ96RK0 1608 aaPredicted RBP28.8■■■□□ 2.2
RAB40C-204ENST00000538492 NUP133Q8WUM0 1156 aa28.8■■■□□ 2.2
RAB40C-204ENST00000538492 CLIC6Q96NY7 704 aa28.8■■■□□ 2.2
RAB40C-204ENST00000538492 GNL3LQ9NVN8 582 aaKnown RBP28.8■■■□□ 2.2
RAB40C-204ENST00000538492 PIP4K2BP78356 416 aa28.8■■■□□ 2.2
RAB40C-204ENST00000538492 SHC4Q6S5L8 630 aa28.8■■■□□ 2.2
RAB40C-204ENST00000538492 KCNJ14Q9UNX9 436 aa28.8■■■□□ 2.2
RAB40C-204ENST00000538492 STK36Q9NRP7 1315 aa28.8■■■□□ 2.2
RAB40C-204ENST00000538492 ARID5BQ14865 1188 aa28.79■■■□□ 2.2
RAB40C-204ENST00000538492 ISM2Q6H9L7 571 aa28.79■■■□□ 2.2
RAB40C-204ENST00000538492 CELF1Q92879 486 aaKnown RBP28.79■■■□□ 2.2
RAB40C-204ENST00000538492 MINPP1Q9UNW1 487 aa28.79■■■□□ 2.2
RAB40C-204ENST00000538492 SYKP43405 635 aa28.79■■■□□ 2.2
RAB40C-204ENST00000538492 RNF41Q9H4P4 317 aaPredicted RBP28.79■■■□□ 2.2
RAB40C-204ENST00000538492 BSDC1Q9NW68 430 aaPredicted RBP28.79■■■□□ 2.2
RAB40C-204ENST00000538492 BTBD18B2RXH4 712 aa28.78■■■□□ 2.2
RAB40C-204ENST00000538492 PPP6R2O75170 966 aa28.78■■■□□ 2.2
RAB40C-204ENST00000538492 SF3B3Q15393 1217 aaKnown RBP28.78■■■□□ 2.2
RAB40C-204ENST00000538492 PTF1AQ7RTS3 328 aa28.78■■■□□ 2.2
RAB40C-204ENST00000538492 JMYQ8N9B5 988 aa28.78■■■□□ 2.2
RAB40C-204ENST00000538492 CAVIN4Q5BKX8 364 aa28.78■■■□□ 2.2
RAB40C-204ENST00000538492 TBC1D9BQ66K14 1250 aa28.78■■■□□ 2.2
RAB40C-204ENST00000538492 UBAC1Q9BSL1 405 aa28.78■■■□□ 2.2
RAB40C-204ENST00000538492 UBE4AQ14139 1066 aa28.77■■■□□ 2.2
RAB40C-204ENST00000538492 TRIM22Q8IYM9 498 aa28.77■■■□□ 2.2
RAB40C-204ENST00000538492 CASZ1Q86V15 1759 aa28.77■■■□□ 2.2
RAB40C-204ENST00000538492 DYNLL1P63167 89 aaKnown RBP28.77■■■□□ 2.2
RAB40C-204ENST00000538492 FILIP1Q7Z7B0 1213 aa28.77■■■□□ 2.2
RAB40C-204ENST00000538492 TSC1Q92574 1164 aa28.77■■■□□ 2.2
RAB40C-204ENST00000538492 NOSTRINQ8IVI9 506 aa28.76■■■□□ 2.2
RAB40C-204ENST00000538492 WASF1Q92558 559 aa28.76■■■□□ 2.2
RAB40C-204ENST00000538492 A0A1B0GUL6 1792 aa28.76■■■□□ 2.19
RAB40C-204ENST00000538492 CYP2D7A0A087X1C5 515 aa28.76■■■□□ 2.19
RAB40C-204ENST00000538492 ZNF654Q8IZM8 581 aa28.76■■■□□ 2.19
RAB40C-204ENST00000538492 FAM84BQ96KN1 310 aaPredicted RBP28.76■■■□□ 2.19
RAB40C-204ENST00000538492 MMP1P03956 469 aa28.75■■■□□ 2.19
RAB40C-204ENST00000538492 NBPF11Q86T75 865 aa28.75■■■□□ 2.19
RAB40C-204ENST00000538492 LRRC8AQ8IWT6 810 aa28.75■■■□□ 2.19
RAB40C-204ENST00000538492 DIS3L2Q8IYB7 885 aaKnown RBP28.75■■■□□ 2.19
RAB40C-204ENST00000538492 RIOK1Q9BRS2 568 aaKnown RBP28.75■■■□□ 2.19
RAB40C-204ENST00000538492 HPSEQ9Y251 543 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms