RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 ZSCAN26Q16670 478 aa7.79□□□□□ -1.16
USP28-207ENST00000538475 ANO6Q4KMQ2 910 aa7.79□□□□□ -1.16
USP28-207ENST00000538475 GNASQ5JWF2 1037 aa7.79□□□□□ -1.16
USP28-207ENST00000538475 NBPF10Q6P3W6 841 aaKnown RBP7.79□□□□□ -1.16
USP28-207ENST00000538475 NBPF15Q8N660 670 aa7.79□□□□□ -1.16
USP28-207ENST00000538475 GPR161Q8N6U8 529 aaKnown RBP7.79□□□□□ -1.16
USP28-207ENST00000538475 CEP120Q8N960 986 aa7.79□□□□□ -1.16
USP28-207ENST00000538475 FOXD4L4Q8WXT5 416 aaPredicted RBP7.79□□□□□ -1.16
USP28-207ENST00000538475 NANOS1Q8WY41 292 aaKnown RBP7.79□□□□□ -1.16
USP28-207ENST00000538475 PPM1EQ8WY54 764 aa7.79□□□□□ -1.16
USP28-207ENST00000538475 DDX11Q96FC9 970 aa7.79□□□□□ -1.16
USP28-207ENST00000538475 BPIFA3Q9BQP9 254 aa7.79□□□□□ -1.16
USP28-207ENST00000538475 ETNK1Q9HBU6 452 aa7.79□□□□□ -1.16
USP28-207ENST00000538475 TIMMDC1Q9NPL8 285 aa7.79□□□□□ -1.16
USP28-207ENST00000538475 ZNF446Q9NWS9 450 aa7.79□□□□□ -1.16
USP28-207ENST00000538475 RSPH14Q9UHP6 348 aa7.79□□□□□ -1.16
USP28-207ENST00000538475 DNAI1Q9UI46 699 aa7.79□□□□□ -1.16
USP28-207ENST00000538475 NOD1Q9Y239 953 aa7.79□□□□□ -1.16
USP28-207ENST00000538475 FAM208AQ9UK61 1670 aaKnown RBP7.79□□□□□ -1.16
USP28-207ENST00000538475 DLC1Q96QB1 1528 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 ERICH4A6NGS2 130 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 SPATA31C2B4DYI2 1134 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 SGSM2O43147 1006 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 CPP00450 1065 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 GNAI2P04899 355 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 PRKAR2BP31323 418 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 ACTN2P35609 894 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 GDF10P55107 478 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 ETF1P62495 437 aaKnown RBP7.78□□□□□ -1.16
USP28-207ENST00000538475 CCZ1BP86790 482 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 CCZ1P86791 482 aaPredicted RBP7.78□□□□□ -1.16
USP28-207ENST00000538475 ATP8B2P98198 1209 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 PSME1Q06323 249 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 SF3B2Q13435 895 aaKnown RBP7.78□□□□□ -1.16
USP28-207ENST00000538475 NCOA4Q13772 614 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 IQCB1Q15051 598 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 BRD3Q15059 726 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 TLR1Q15399 786 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 LRRFIP1Q32MZ4 808 aaKnown RBP7.78□□□□□ -1.16
USP28-207ENST00000538475 CCDC91Q7Z6B0 441 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 SRLQ86TD4 932 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 DEPDC4Q8N2C3 294 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 HNRNPLLQ8WVV9 542 aaKnown RBP7.78□□□□□ -1.16
USP28-207ENST00000538475 CEP89Q96ST8 783 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 MPHOSPH8Q99549 860 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 DEF6Q9H4E7 631 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 ZSCAN16Q9H4T2 348 aaPredicted RBP7.78□□□□□ -1.16
USP28-207ENST00000538475 ANO10Q9NW15 660 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 ORC3Q9UBD5 711 aaPredicted RBP7.78□□□□□ -1.16
USP28-207ENST00000538475 CFAP45Q9UL16 551 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 PALD1Q9ULE6 856 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 DYRK1BQ9Y463 629 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 LRRFIP2Q9Y608 721 aaKnown RBP7.78□□□□□ -1.16
USP28-207ENST00000538475 PLEKHG2Q9H7P9 1386 aa7.78□□□□□ -1.16
USP28-207ENST00000538475 USP42Q9H9J4 1324 aaKnown RBP7.78□□□□□ -1.16
USP28-207ENST00000538475 MSH6P52701 1360 aa7.77□□□□□ -1.17
USP28-207ENST00000538475 CCDC69A6NI79 296 aa7.77□□□□□ -1.17
USP28-207ENST00000538475 USP17L5A8MUK1 530 aa7.77□□□□□ -1.17
USP28-207ENST00000538475 BRD2P25440 801 aaKnown RBP7.77□□□□□ -1.17
USP28-207ENST00000538475 PSMA5P28066 241 aa7.77□□□□□ -1.17
USP28-207ENST00000538475 USP8P40818 1118 aa7.77□□□□□ -1.17
USP28-207ENST00000538475 PHKA2P46019 1235 aa7.77□□□□□ -1.17
USP28-207ENST00000538475 DNM1Q05193 864 aaKnown RBP7.77□□□□□ -1.17
USP28-207ENST00000538475 LRMPQ12912 555 aa7.77□□□□□ -1.17
USP28-207ENST00000538475 TTC31Q49AM3 519 aaPredicted RBP7.77□□□□□ -1.17
USP28-207ENST00000538475 HSP90AB4PQ58FF6 505 aa7.77□□□□□ -1.17
USP28-207ENST00000538475 WDR44Q5JSH3 913 aa7.77□□□□□ -1.17
USP28-207ENST00000538475 LEKR1Q6ZMV7 388 aa7.77□□□□□ -1.17
USP28-207ENST00000538475 KRBA2Q6ZNG9 492 aa7.77□□□□□ -1.17
USP28-207ENST00000538475 LUZP1Q86V48 1076 aa7.77□□□□□ -1.17
USP28-207ENST00000538475 ADAMTS19Q8TE59 1207 aa7.77□□□□□ -1.17
USP28-207ENST00000538475 RABGGTAQ92696 567 aa7.77□□□□□ -1.17
USP28-207ENST00000538475 CHMP4AQ9BY43 222 aa7.77□□□□□ -1.17
USP28-207ENST00000538475 ARFGAP3Q9NP61 516 aa7.77□□□□□ -1.17
USP28-207ENST00000538475 ATG3Q9NT62 314 aa7.77□□□□□ -1.17
USP28-207ENST00000538475 HYPKQ9NX55 129 aa7.77□□□□□ -1.17
USP28-207ENST00000538475 POLKQ9UBT6 870 aa7.77□□□□□ -1.17
USP28-207ENST00000538475 TRAK1Q9UPV9 953 aa7.77□□□□□ -1.17
USP28-207ENST00000538475 SNX14Q9Y5W7 946 aa7.77□□□□□ -1.17
USP28-207ENST00000538475 CYP46A1Q9Y6A2 500 aa7.77□□□□□ -1.17
USP28-207ENST00000538475 MAP3K5Q99683 1374 aa7.76□□□□□ -1.17
USP28-207ENST00000538475 RGPD1P0DJD0 1748 aa7.76□□□□□ -1.17
USP28-207ENST00000538475 CCDC151A5D8V7 595 aa7.76□□□□□ -1.17
USP28-207ENST00000538475 FAM181BA6NEQ2 426 aa7.76□□□□□ -1.17
USP28-207ENST00000538475 HIP1O00291 1037 aa7.76□□□□□ -1.17
USP28-207ENST00000538475 CHL1O00533 1208 aa7.76□□□□□ -1.17
USP28-207ENST00000538475 ZSCAN12O43309 604 aa7.76□□□□□ -1.17
USP28-207ENST00000538475 EIF3JO75822 258 aaKnown RBP7.76□□□□□ -1.17
USP28-207ENST00000538475 INHAP05111 366 aa7.76□□□□□ -1.17
USP28-207ENST00000538475 CASTP20810 708 aaKnown RBP7.76□□□□□ -1.17
USP28-207ENST00000538475 GJB2P29033 226 aa7.76□□□□□ -1.17
USP28-207ENST00000538475 AK2P54819 239 aa7.76□□□□□ -1.17
USP28-207ENST00000538475 GTF2IP78347 998 aa7.76□□□□□ -1.17
USP28-207ENST00000538475 ARHGAP29Q52LW3 1261 aa7.76□□□□□ -1.17
USP28-207ENST00000538475 FOXR1Q6PIV2 292 aa7.76□□□□□ -1.17
USP28-207ENST00000538475 RUFY3Q7L099 469 aa7.76□□□□□ -1.17
USP28-207ENST00000538475 TTC6Q86TZ1 520 aa7.76□□□□□ -1.17
USP28-207ENST00000538475 CEP57L1Q8IYX8 460 aa7.76□□□□□ -1.17
USP28-207ENST00000538475 CNTROBQ8N137 903 aa7.76□□□□□ -1.17
USP28-207ENST00000538475 FNBP4Q8N3X1 1017 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms