RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 MRIQ9BWK5 157 aa12.66□□□□□ -0.38
TNFRSF1A-211ENST00000538363 MCM9Q9NXL9 1143 aa12.66□□□□□ -0.38
TNFRSF1A-211ENST00000538363 ADAMTSL1Q8N6G6 1762 aa12.66□□□□□ -0.38
TNFRSF1A-211ENST00000538363 FZD9O00144 591 aa12.65□□□□□ -0.38
TNFRSF1A-211ENST00000538363 GMPSP49915 693 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF1A-211ENST00000538363 ALX1Q15699 326 aa12.65□□□□□ -0.38
TNFRSF1A-211ENST00000538363 GIMAP6Q6P9H5 292 aa12.65□□□□□ -0.38
TNFRSF1A-211ENST00000538363 ZDHHC15Q96MV8 337 aa12.65□□□□□ -0.38
TNFRSF1A-211ENST00000538363 RIOK1Q9BRS2 568 aaKnown RBP12.65□□□□□ -0.38
TNFRSF1A-211ENST00000538363 SAP30BPQ9UHR5 308 aaKnown RBP12.65□□□□□ -0.38
TNFRSF1A-211ENST00000538363 CNOT7Q9UIV1 285 aaKnown RBP12.65□□□□□ -0.38
TNFRSF1A-211ENST00000538363 GSG1L2A8MUP6 293 aa12.64□□□□□ -0.39
TNFRSF1A-211ENST00000538363 HLA-DOAP06340 250 aa12.64□□□□□ -0.39
TNFRSF1A-211ENST00000538363 CASTP20810 708 aaKnown RBP12.64□□□□□ -0.39
TNFRSF1A-211ENST00000538363 NEK4P51957 841 aa12.64□□□□□ -0.39
TNFRSF1A-211ENST00000538363 NECTIN1Q15223 517 aa12.64□□□□□ -0.39
TNFRSF1A-211ENST00000538363 RRP12Q5JTH9 1297 aaKnown RBP12.64□□□□□ -0.39
TNFRSF1A-211ENST00000538363 BLOC1S2Q6QNY1 142 aa12.64□□□□□ -0.39
TNFRSF1A-211ENST00000538363 MFSD6Q6ZSS7 791 aa12.64□□□□□ -0.39
TNFRSF1A-211ENST00000538363 HSCBQ8IWL3 235 aa12.64□□□□□ -0.39
TNFRSF1A-211ENST00000538363 GPC2Q8N158 579 aa12.64□□□□□ -0.39
TNFRSF1A-211ENST00000538363 ZNF384Q8TF68 577 aa12.64□□□□□ -0.39
TNFRSF1A-211ENST00000538363 RNF41Q9H4P4 317 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF1A-211ENST00000538363 VEZTQ9HBM0 779 aa12.64□□□□□ -0.39
TNFRSF1A-211ENST00000538363 SNX14Q9Y5W7 946 aa12.64□□□□□ -0.39
TNFRSF1A-211ENST00000538363 CYP46A1Q9Y6A2 500 aa12.64□□□□□ -0.39
TNFRSF1A-211ENST00000538363 GAKO14976 1311 aa12.63□□□□□ -0.39
TNFRSF1A-211ENST00000538363 USP17L12C9JPN9 530 aa12.63□□□□□ -0.39
TNFRSF1A-211ENST00000538363 USP17L21D6R901 530 aa12.63□□□□□ -0.39
TNFRSF1A-211ENST00000538363 HMGB1P09429 215 aaKnown RBP12.63□□□□□ -0.39
TNFRSF1A-211ENST00000538363 TNNI2P48788 182 aa12.63□□□□□ -0.39
TNFRSF1A-211ENST00000538363 PDE4BQ07343 736 aa12.63□□□□□ -0.39
TNFRSF1A-211ENST00000538363 SLC4A8Q2Y0W8 1093 aa12.63□□□□□ -0.39
TNFRSF1A-211ENST00000538363 CDC42EP5Q6NZY7 148 aa12.63□□□□□ -0.39
TNFRSF1A-211ENST00000538363 TTC6Q86TZ1 520 aa12.63□□□□□ -0.39
TNFRSF1A-211ENST00000538363 MICALL2Q8IY33 904 aa12.63□□□□□ -0.39
TNFRSF1A-211ENST00000538363 NCOA7Q8NI08 942 aa12.63□□□□□ -0.39
TNFRSF1A-211ENST00000538363 DPF2Q92785 391 aa12.63□□□□□ -0.39
TNFRSF1A-211ENST00000538363 NEK1Q96PY6 1258 aa12.63□□□□□ -0.39
TNFRSF1A-211ENST00000538363 TDRD3Q9H7E2 651 aaKnown RBP12.63□□□□□ -0.39
TNFRSF1A-211ENST00000538363 ZNF287Q9HBT7 754 aa12.63□□□□□ -0.39
TNFRSF1A-211ENST00000538363 MYOZ2Q9NPC6 264 aa12.63□□□□□ -0.39
TNFRSF1A-211ENST00000538363 ARPP21Q9UBL0 812 aaPredicted RBP12.63□□□□□ -0.39
TNFRSF1A-211ENST00000538363 GOLGB1Q14789 3259 aaKnown RBP12.63□□□□□ -0.39
TNFRSF1A-211ENST00000538363 ZNF541Q9H0D2 1346 aa12.62□□□□□ -0.39
TNFRSF1A-211ENST00000538363 HSP90AA1P07900 732 aaKnown RBP12.62□□□□□ -0.39
TNFRSF1A-211ENST00000538363 CYP21A2P08686 494 aa12.62□□□□□ -0.39
TNFRSF1A-211ENST00000538363 CTDSPL2Q05D32 466 aa12.62□□□□□ -0.39
TNFRSF1A-211ENST00000538363 PPARAQ07869 468 aa12.62□□□□□ -0.39
TNFRSF1A-211ENST00000538363 TCP10Q12799 353 aa12.62□□□□□ -0.39
TNFRSF1A-211ENST00000538363 TBC1D10BQ4KMP7 808 aaPredicted RBP12.62□□□□□ -0.39
TNFRSF1A-211ENST00000538363 CRACR2BQ8N4Y2 399 aaPredicted RBP12.62□□□□□ -0.39
TNFRSF1A-211ENST00000538363 KRT23Q9C075 422 aa12.62□□□□□ -0.39
TNFRSF1A-211ENST00000538363 CNNM2Q9H8M5 875 aa12.62□□□□□ -0.39
TNFRSF1A-211ENST00000538363 MKNK2Q9HBH9 465 aa12.62□□□□□ -0.39
TNFRSF1A-211ENST00000538363 DCP1AQ9NPI6 582 aaPredicted RBP12.62□□□□□ -0.39
TNFRSF1A-211ENST00000538363 PDRG1Q9NUG6 133 aa12.62□□□□□ -0.39
TNFRSF1A-211ENST00000538363 PALD1Q9ULE6 856 aa12.62□□□□□ -0.39
TNFRSF1A-211ENST00000538363 NAP1L2Q9ULW6 460 aaPredicted RBP12.62□□□□□ -0.39
TNFRSF1A-211ENST00000538363 CLRN2A0PK11 232 aa12.61□□□□□ -0.39
TNFRSF1A-211ENST00000538363 TCP10L2B9ZVM9 353 aa12.61□□□□□ -0.39
TNFRSF1A-211ENST00000538363 E7EWF7 191 aa12.61□□□□□ -0.39
TNFRSF1A-211ENST00000538363 DDNO94850 711 aaPredicted RBP12.61□□□□□ -0.39
TNFRSF1A-211ENST00000538363 APOBEC3HQ6NTF7 200 aaKnown RBP12.61□□□□□ -0.39
TNFRSF1A-211ENST00000538363 CTR9Q6PD62 1173 aa12.61□□□□□ -0.39
TNFRSF1A-211ENST00000538363 NOL8Q76FK4 1167 aaKnown RBP12.61□□□□□ -0.39
TNFRSF1A-211ENST00000538363 RASEFQ8IZ41 740 aa12.61□□□□□ -0.39
TNFRSF1A-211ENST00000538363 IL27Q8NEV9 243 aa12.61□□□□□ -0.39
TNFRSF1A-211ENST00000538363 PRMT6Q96LA8 375 aaPredicted RBP12.61□□□□□ -0.39
TNFRSF1A-211ENST00000538363 ERICH2A1L162 156 aa12.6□□□□□ -0.39
TNFRSF1A-211ENST00000538363 CACNB3P54284 484 aa12.6□□□□□ -0.39
TNFRSF1A-211ENST00000538363 SART3Q15020 963 aaKnown RBP12.6□□□□□ -0.39
TNFRSF1A-211ENST00000538363 KIF4BQ2VIQ3 1234 aa12.6□□□□□ -0.39
TNFRSF1A-211ENST00000538363 AKNAD1Q5T1N1 836 aa12.6□□□□□ -0.39
TNFRSF1A-211ENST00000538363 ZNF444Q8N0Y2 327 aaPredicted RBP12.6□□□□□ -0.39
TNFRSF1A-211ENST00000538363 GMLQ99445 158 aa12.6□□□□□ -0.39
TNFRSF1A-211ENST00000538363 UPF3BQ9BZI7 483 aaKnown RBP12.6□□□□□ -0.39
TNFRSF1A-211ENST00000538363 ZNF70Q9UC06 446 aaPredicted RBP12.6□□□□□ -0.39
TNFRSF1A-211ENST00000538363 FARP1Q9Y4F1 1045 aaPredicted RBP12.6□□□□□ -0.39
TNFRSF1A-211ENST00000538363 ZMYM6O95789 1325 aa12.6□□□□□ -0.39
TNFRSF1A-211ENST00000538363 CYP2D7A0A087X1C5 515 aa12.59□□□□□ -0.39
TNFRSF1A-211ENST00000538363 RANBP6O60518 1105 aaKnown RBP12.59□□□□□ -0.39
TNFRSF1A-211ENST00000538363 MCM5P33992 734 aa12.59□□□□□ -0.39
TNFRSF1A-211ENST00000538363 MCM2P49736 904 aa12.59□□□□□ -0.39
TNFRSF1A-211ENST00000538363 RHBDL3P58872 404 aa12.59□□□□□ -0.39
TNFRSF1A-211ENST00000538363 TNFAIP1Q13829 316 aa12.59□□□□□ -0.39
TNFRSF1A-211ENST00000538363 ANKRD1Q15327 319 aa12.59□□□□□ -0.39
TNFRSF1A-211ENST00000538363 TSGA10IPQ3SY00 556 aa12.59□□□□□ -0.39
TNFRSF1A-211ENST00000538363 SBK1Q52WX2 424 aa12.59□□□□□ -0.39
TNFRSF1A-211ENST00000538363 RUFY3Q7L099 469 aa12.59□□□□□ -0.39
TNFRSF1A-211ENST00000538363 SAMD7Q7Z3H4 446 aa12.59□□□□□ -0.39
TNFRSF1A-211ENST00000538363 ESR2Q92731 530 aa12.59□□□□□ -0.39
TNFRSF1A-211ENST00000538363 TM6SF1Q9BZW5 370 aa12.59□□□□□ -0.39
TNFRSF1A-211ENST00000538363 EPB41L4AQ9HCS5 686 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF1A-211ENST00000538363 GPRC5DQ9NZD1 345 aa12.59□□□□□ -0.39
TNFRSF1A-211ENST00000538363 PCDHAC2Q9Y5I4 1007 aa12.59□□□□□ -0.39
TNFRSF1A-211ENST00000538363 FLT1P17948 1338 aa12.59□□□□□ -0.39
TNFRSF1A-211ENST00000538363 ENTPD3O75355 529 aa12.58□□□□□ -0.4
TNFRSF1A-211ENST00000538363 CYP2D6P10635 497 aa12.58□□□□□ -0.4
TNFRSF1A-211ENST00000538363 PCP11498 1178 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms