RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 RAD17O75943 681 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 PCCAP05165 728 aaPredicted RBP6.06□□□□□ -1.44
LRP6-203ENST00000538239 UBASH3AP57075 661 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 CEP135Q66GS9 1140 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 HS2ST1Q7LGA3 356 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 LRRC47Q8N1G4 583 aaKnown RBP6.06□□□□□ -1.44
LRP6-203ENST00000538239 PROCA1Q8NCQ7 364 aaPredicted RBP6.06□□□□□ -1.44
LRP6-203ENST00000538239 ABT1Q9ULW3 272 aaKnown RBP6.06□□□□□ -1.44
LRP6-203ENST00000538239 M0QZ92 97 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 ZBTB7AO95365 584 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 DEXIO95424 95 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 ARHGEF16Q5VV41 709 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 SV2BQ7L1I2 683 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 KBTBD3Q8NAB2 608 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 MYOM2P54296 1465 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 EEF2P13639 858 aaKnown RBP6.06□□□□□ -1.44
LRP6-203ENST00000538239 EZRP15311 586 aaKnown RBP6.06□□□□□ -1.44
LRP6-203ENST00000538239 PAFAH1B1P43034 410 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 STRN3Q13033 797 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 CERKLQ49MI3 558 aaPredicted RBP6.06□□□□□ -1.44
LRP6-203ENST00000538239 EP400NLQ6ZTU2 488 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 IFT74Q96LB3 600 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 THRAP3Q9Y2W1 955 aaKnown RBP6.06□□□□□ -1.44
LRP6-203ENST00000538239 XDHP47989 1333 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 ALAS1P13196 640 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 PTGS1P23219 599 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 MRPS9P82933 396 aaKnown RBP6.06□□□□□ -1.44
LRP6-203ENST00000538239 SEC31BQ9NQW1 1179 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 ARPP21Q9UBL0 812 aaPredicted RBP6.06□□□□□ -1.44
LRP6-203ENST00000538239 PABPN1LA6NDY0 278 aaKnown RBP6.05□□□□□ -1.44
LRP6-203ENST00000538239 EIF3JO75822 258 aaKnown RBP6.05□□□□□ -1.44
LRP6-203ENST00000538239 MYCP01106 439 aaPredicted RBP6.05□□□□□ -1.44
LRP6-203ENST00000538239 KRT5P13647 590 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 IFFO1Q0D2I5 559 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 LEKR1Q6ZMV7 388 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 PHKBQ93100 1093 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 SETD1BQ9UPS6 1966 aaKnown RBP6.05□□□□□ -1.44
LRP6-203ENST00000538239 ANKARQ7Z5J8 1434 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 ATP7BP35670 1465 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 BIRC3Q13489 604 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 CCDC65Q8IXS2 484 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 AOPEPQ8N6M6 819 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 DYDC1Q8WWB3 177 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 PIGBQ92521 554 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 FNBP1Q96RU3 617 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 SLC5A4Q9NY91 659 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 ANGEL1Q9UNK9 670 aaKnown RBP6.05□□□□□ -1.44
LRP6-203ENST00000538239 PRR36Q9H6K5 1346 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 BLMP54132 1417 aaPredicted RBP6.05□□□□□ -1.44
LRP6-203ENST00000538239 USP17L12C9JPN9 530 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 USP17L21D6R901 530 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 AKR1B10O60218 316 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 ADCY5O95622 1261 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 IL6STP40189 918 aaPredicted RBP6.05□□□□□ -1.44
LRP6-203ENST00000538239 GPR101Q96P66 508 aaPredicted RBP6.05□□□□□ -1.44
LRP6-203ENST00000538239 JADE2Q9NQC1 790 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 PALLDQ8WX93 1383 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 IBTKQ9P2D0 1353 aaPredicted RBP6.05□□□□□ -1.44
LRP6-203ENST00000538239 TESPA1A2RU30 521 aaPredicted RBP6.05□□□□□ -1.44
LRP6-203ENST00000538239 ARHGEF35A5YM69 484 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 PUS3Q9BZE2 481 aaKnown RBP6.05□□□□□ -1.44
LRP6-203ENST00000538239 DACT1Q9NYF0 836 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.05□□□□□ -1.44
LRP6-203ENST00000538239 PRDM15P57071 1507 aaPredicted RBP6.05□□□□□ -1.44
LRP6-203ENST00000538239 DTNBO60941 627 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 SMTNP53814 917 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 SPECC1Q5M775 1068 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 CMTR1Q8N1G2 835 aaKnown RBP6.05□□□□□ -1.44
LRP6-203ENST00000538239 OTUD6BQ8N6M0 293 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 USP26Q9BXU7 913 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 SPC25Q9HBM1 224 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 FRMD4BQ9Y2L6 1034 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 ACTN2P35609 894 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 CERKQ8TCT0 537 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 CTAGE1Q96RT6 745 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 NPC1L1Q9UHC9 1359 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 UQCRHLA0A096LP55 91 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 UQCRHP07919 91 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 ZSCAN23Q3MJ62 389 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 BRAPQ7Z569 592 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 METTL13Q8N6R0 699 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 CTNND2Q9UQB3 1225 aa6.05□□□□□ -1.44
LRP6-203ENST00000538239 SPATA31A3Q5VYP0 1347 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 MMP10P09238 476 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 ADORA1P30542 326 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 EN1Q05925 392 aaPredicted RBP6.04□□□□□ -1.44
LRP6-203ENST00000538239 HLTFQ14527 1009 aaKnown RBP eCLIP6.04□□□□□ -1.44
LRP6-203ENST00000538239 SMC1AQ14683 1233 aaKnown RBP6.04□□□□□ -1.44
LRP6-203ENST00000538239 CCDC93Q567U6 631 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 CCDC91Q7Z6B0 441 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 UBXN4Q92575 508 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 MLXIPQ9HAP2 919 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 TBC1D7Q9P0N9 293 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 SNX14Q9Y5W7 946 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 BICDL2A1A5D9 508 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 C21orf2O43822 256 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 RFX1P22670 979 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 RAD51AP2Q09MP3 1159 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 RAPGEF1Q13905 1077 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 DNAJC25Q9H1X3 360 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms