RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 KIF1BPQ96EK5 621 aa26.25■■□□□ 1.79
CCDC78-215ENST00000538176 OTUD5Q96G74 571 aa26.25■■□□□ 1.79
CCDC78-215ENST00000538176 CCDC8Q9H0W5 538 aaPredicted RBP26.25■■□□□ 1.79
CCDC78-215ENST00000538176 OTOFQ9HC10 1997 aa26.25■■□□□ 1.79
CCDC78-215ENST00000538176 IGF2BP3O00425 579 aaKnown RBP eCLIP26.24■■□□□ 1.79
CCDC78-215ENST00000538176 CETPP11597 493 aa26.24■■□□□ 1.79
CCDC78-215ENST00000538176 RHBDL3P58872 404 aa26.24■■□□□ 1.79
CCDC78-215ENST00000538176 MAP3K10Q02779 954 aa26.24■■□□□ 1.79
CCDC78-215ENST00000538176 PPIL2Q13356 520 aa26.24■■□□□ 1.79
CCDC78-215ENST00000538176 NAA16Q6N069 864 aaPredicted RBP26.24■■□□□ 1.79
CCDC78-215ENST00000538176 RHPN1Q8TCX5 695 aa26.24■■□□□ 1.79
CCDC78-215ENST00000538176 ZNF384Q8TF68 577 aa26.24■■□□□ 1.79
CCDC78-215ENST00000538176 ZCCHC17Q9NP64 241 aaKnown RBP26.24■■□□□ 1.79
CCDC78-215ENST00000538176 CYP2E1P05181 493 aaPredicted RBP26.23■■□□□ 1.79
CCDC78-215ENST00000538176 SNAPC2Q13487 334 aa26.23■■□□□ 1.79
CCDC78-215ENST00000538176 NOL9Q5SY16 702 aaKnown RBP26.23■■□□□ 1.79
CCDC78-215ENST00000538176 AACSQ86V21 672 aa26.23■■□□□ 1.79
CCDC78-215ENST00000538176 SNRKQ9NRH2 765 aa26.23■■□□□ 1.79
CCDC78-215ENST00000538176 RFX7Q2KHR2 1363 aa26.22■■□□□ 1.79
CCDC78-215ENST00000538176 CCL15-CCL14A0A0B4J2E2 113 aa26.22■■□□□ 1.79
CCDC78-215ENST00000538176 CCL15Q16663 113 aa26.22■■□□□ 1.79
CCDC78-215ENST00000538176 CERS3Q8IU89 383 aa26.22■■□□□ 1.79
CCDC78-215ENST00000538176 ZFPM1Q8IX07 1006 aa26.22■■□□□ 1.79
CCDC78-215ENST00000538176 PTPN18Q99952 460 aa26.22■■□□□ 1.79
CCDC78-215ENST00000538176 TBC1D12O60347 775 aa26.21■■□□□ 1.79
CCDC78-215ENST00000538176 PPP4CP60510 307 aa26.21■■□□□ 1.79
CCDC78-215ENST00000538176 CCDC85CA6NKD9 419 aa26.2■■□□□ 1.78
CCDC78-215ENST00000538176 IRF6O14896 467 aa26.2■■□□□ 1.78
CCDC78-215ENST00000538176 INPP5BP32019 993 aa26.2■■□□□ 1.78
CCDC78-215ENST00000538176 ZAP70P43403 619 aa26.2■■□□□ 1.78
CCDC78-215ENST00000538176 PICALMQ13492 652 aa26.2■■□□□ 1.78
CCDC78-215ENST00000538176 CNKSR2Q8WXI2 1034 aa26.2■■□□□ 1.78
CCDC78-215ENST00000538176 ATRNL1Q5VV63 1379 aa26.2■■□□□ 1.78
CCDC78-215ENST00000538176 SIRT2Q8IXJ6 389 aa26.19■■□□□ 1.78
CCDC78-215ENST00000538176 BRI3BPQ8WY22 251 aa26.19■■□□□ 1.78
CCDC78-215ENST00000538176 ZFYVE28Q9HCC9 887 aa26.19■■□□□ 1.78
CCDC78-215ENST00000538176 DDX4Q9NQI0 724 aaKnown RBP26.19■■□□□ 1.78
CCDC78-215ENST00000538176 TLR7Q9NYK1 1049 aaKnown RBP26.19■■□□□ 1.78
CCDC78-215ENST00000538176 DDTLA6NHG4 134 aaPredicted RBP26.18■■□□□ 1.78
CCDC78-215ENST00000538176 CTNND1O60716 968 aaKnown RBP26.18■■□□□ 1.78
CCDC78-215ENST00000538176 TTF1Q15361 905 aaPredicted RBP26.18■■□□□ 1.78
CCDC78-215ENST00000538176 TEX11Q8IYF3 940 aa26.18■■□□□ 1.78
CCDC78-215ENST00000538176 DHX36Q9H2U1 1008 aaKnown RBP26.18■■□□□ 1.78
CCDC78-215ENST00000538176 COL2A1P02458 1487 aaPredicted RBP26.17■■□□□ 1.78
CCDC78-215ENST00000538176 PHF20L1A8MW92 1017 aa26.17■■□□□ 1.78
CCDC78-215ENST00000538176 IFIT2P09913 472 aaKnown RBP26.17■■□□□ 1.78
CCDC78-215ENST00000538176 MAP3K12Q12852 859 aa26.17■■□□□ 1.78
CCDC78-215ENST00000538176 CRHR2Q13324 411 aa26.17■■□□□ 1.78
CCDC78-215ENST00000538176 ARHGEF6Q15052 776 aa26.17■■□□□ 1.78
CCDC78-215ENST00000538176 SH3BP5LQ7L8J4 393 aa26.17■■□□□ 1.78
CCDC78-215ENST00000538176 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.17■■□□□ 1.78
CCDC78-215ENST00000538176 ERO1AQ96HE7 468 aa26.17■■□□□ 1.78
CCDC78-215ENST00000538176 R3HDMLQ9H3Y0 253 aa26.17■■□□□ 1.78
CCDC78-215ENST00000538176 IL1RAPL2Q9NP60 686 aa26.17■■□□□ 1.78
CCDC78-215ENST00000538176 PICK1Q9NRD5 415 aa26.17■■□□□ 1.78
CCDC78-215ENST00000538176 KCNH4Q9UQ05 1017 aa26.17■■□□□ 1.78
CCDC78-215ENST00000538176 CXCL11O14625 94 aa26.16■■□□□ 1.78
CCDC78-215ENST00000538176 TAF1CQ15572 869 aaPredicted RBP26.16■■□□□ 1.78
CCDC78-215ENST00000538176 SCYL3Q8IZE3 742 aa26.16■■□□□ 1.78
CCDC78-215ENST00000538176 OSBPL5Q9H0X9 879 aaPredicted RBP26.16■■□□□ 1.78
CCDC78-215ENST00000538176 C20orf194Q5TEA3 1177 aa26.15■■□□□ 1.78
CCDC78-215ENST00000538176 AATFQ9NY61 560 aaKnown RBP eCLIP26.15■■□□□ 1.78
CCDC78-215ENST00000538176 IDH1O75874 414 aaKnown RBP26.14■■□□□ 1.78
CCDC78-215ENST00000538176 SP3Q02447 781 aa26.14■■□□□ 1.78
CCDC78-215ENST00000538176 PIH1D3Q9NQM4 214 aaKnown RBP26.14■■□□□ 1.78
CCDC78-215ENST00000538176 PI4KBQ9UBF8 816 aa26.14■■□□□ 1.78
CCDC78-215ENST00000538176 HERC5Q9UII4 1024 aaKnown RBP26.14■■□□□ 1.78
CCDC78-215ENST00000538176 DOCK2Q92608 1830 aa26.14■■□□□ 1.77
CCDC78-215ENST00000538176 FBXO46Q6PJ61 603 aaPredicted RBP26.13■■□□□ 1.77
CCDC78-215ENST00000538176 FAM43AQ8N2R8 423 aa26.13■■□□□ 1.77
CCDC78-215ENST00000538176 SH3RF3Q8TEJ3 882 aaPredicted RBP26.13■■□□□ 1.77
CCDC78-215ENST00000538176 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.13■■□□□ 1.77
CCDC78-215ENST00000538176 CYP7A1P22680 504 aa26.12■■□□□ 1.77
CCDC78-215ENST00000538176 ANKRD23Q86SG2 305 aa26.12■■□□□ 1.77
CCDC78-215ENST00000538176 TBC1D2Q9BYX2 928 aa26.12■■□□□ 1.77
CCDC78-215ENST00000538176 MAST2Q6P0Q8 1798 aa26.11■■□□□ 1.77
CCDC78-215ENST00000538176 BTBD19C9JJ37 291 aa26.11■■□□□ 1.77
CCDC78-215ENST00000538176 APBB1O00213 710 aa26.11■■□□□ 1.77
CCDC78-215ENST00000538176 PTPRAP18433 802 aa26.11■■□□□ 1.77
CCDC78-215ENST00000538176 FASTKD5Q7L8L6 764 aaKnown RBP26.11■■□□□ 1.77
CCDC78-215ENST00000538176 FOXP4Q8IVH2 680 aaPredicted RBP26.11■■□□□ 1.77
CCDC78-215ENST00000538176 ZHX2Q9Y6X8 837 aa26.11■■□□□ 1.77
CCDC78-215ENST00000538176 TLR2O60603 784 aa26.1■■□□□ 1.77
CCDC78-215ENST00000538176 RGS19P49795 217 aa26.1■■□□□ 1.77
CCDC78-215ENST00000538176 LRRCC1Q9C099 1032 aa26.1■■□□□ 1.77
CCDC78-215ENST00000538176 ADGRA1Q86SQ6 560 aa26.09■■□□□ 1.77
CCDC78-215ENST00000538176 MAGEB6Q8N7X4 407 aa26.09■■□□□ 1.77
CCDC78-215ENST00000538176 TGFBRAP1Q8WUH2 860 aa26.09■■□□□ 1.77
CCDC78-215ENST00000538176 HPS5Q9UPZ3 1129 aa26.08■■□□□ 1.77
CCDC78-215ENST00000538176 AFG3L2Q9Y4W6 797 aa26.08■■□□□ 1.77
CCDC78-215ENST00000538176 TRIM17Q9Y577 477 aa26.08■■□□□ 1.77
CCDC78-215ENST00000538176 ANTXR1Q9H6X2 564 aa26.07■■□□□ 1.76
CCDC78-215ENST00000538176 EFCC1Q9HA90 598 aa26.07■■□□□ 1.76
CCDC78-215ENST00000538176 HLA-DOAP06340 250 aa26.06■■□□□ 1.76
CCDC78-215ENST00000538176 ATP5JP18859 108 aa26.06■■□□□ 1.76
CCDC78-215ENST00000538176 KIF22Q14807 665 aa26.06■■□□□ 1.76
CCDC78-215ENST00000538176 OTOP1Q7RTM1 612 aa26.06■■□□□ 1.76
CCDC78-215ENST00000538176 METTL16Q86W50 562 aaKnown RBP26.06■■□□□ 1.76
CCDC78-215ENST00000538176 TRIM34Q9BYJ4 488 aa26.06■■□□□ 1.76
CCDC78-215ENST00000538176 GINM1Q9NU53 330 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms