RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 IRF6O14896 467 aa18.33■□□□□ 0.52
LRRK1-211ENST00000538064 SNAPC2Q13487 334 aa18.33■□□□□ 0.52
LRRK1-211ENST00000538064 ERO1AQ96HE7 468 aa18.33■□□□□ 0.52
LRRK1-211ENST00000538064 DBNDD2Q9BQY9 259 aa18.33■□□□□ 0.52
LRRK1-211ENST00000538064 ZCCHC17Q9NP64 241 aaKnown RBP18.33■□□□□ 0.52
LRRK1-211ENST00000538064 SIPA1L1O43166 1804 aa18.33■□□□□ 0.52
LRRK1-211ENST00000538064 MAP4K4O95819 1239 aaPredicted RBP18.32■□□□□ 0.52
LRRK1-211ENST00000538064 MS4A1P11836 297 aa18.32■□□□□ 0.52
LRRK1-211ENST00000538064 RHBDL3P58872 404 aa18.32■□□□□ 0.52
LRRK1-211ENST00000538064 MLLT1Q03111 559 aaPredicted RBP18.32■□□□□ 0.52
LRRK1-211ENST00000538064 TAF1CQ15572 869 aaPredicted RBP18.32■□□□□ 0.52
LRRK1-211ENST00000538064 TTC39AQ5SRH9 613 aa18.32■□□□□ 0.52
LRRK1-211ENST00000538064 TBC1D9Q6ZT07 1266 aa18.32■□□□□ 0.52
LRRK1-211ENST00000538064 SH3BP5LQ7L8J4 393 aa18.32■□□□□ 0.52
LRRK1-211ENST00000538064 FAM43AQ8N2R8 423 aa18.32■□□□□ 0.52
LRRK1-211ENST00000538064 DDX4Q9NQI0 724 aaKnown RBP18.32■□□□□ 0.52
LRRK1-211ENST00000538064 ZSWIM8A7E2V4 1837 aa18.32■□□□□ 0.52
LRRK1-211ENST00000538064 NPM3O75607 178 aaKnown RBP18.31■□□□□ 0.52
LRRK1-211ENST00000538064 LDHCP07864 332 aa18.31■□□□□ 0.52
LRRK1-211ENST00000538064 PICALMQ13492 652 aa18.31■□□□□ 0.52
LRRK1-211ENST00000538064 CCDC158Q5M9N0 1113 aa18.31■□□□□ 0.52
LRRK1-211ENST00000538064 OTOP1Q7RTM1 612 aa18.31■□□□□ 0.52
LRRK1-211ENST00000538064 ZNF512BQ96KM6 892 aaPredicted RBP18.31■□□□□ 0.52
LRRK1-211ENST00000538064 YTHDC1Q96MU7 727 aaKnown RBP18.31■□□□□ 0.52
LRRK1-211ENST00000538064 ZFYVE28Q9HCC9 887 aa18.31■□□□□ 0.52
LRRK1-211ENST00000538064 RAI14Q9P0K7 980 aa18.31■□□□□ 0.52
LRRK1-211ENST00000538064 KCNH4Q9UQ05 1017 aa18.31■□□□□ 0.52
LRRK1-211ENST00000538064 TRIM17Q9Y577 477 aa18.31■□□□□ 0.52
LRRK1-211ENST00000538064 HTTP42858 3142 aa18.31■□□□□ 0.52
LRRK1-211ENST00000538064 BTBD19C9JJ37 291 aa18.3■□□□□ 0.52
LRRK1-211ENST00000538064 SOX10P56693 466 aa18.3■□□□□ 0.52
LRRK1-211ENST00000538064 SP3Q02447 781 aa18.3■□□□□ 0.52
LRRK1-211ENST00000538064 ZSCAN29Q8IWY8 852 aaPredicted RBP18.3■□□□□ 0.52
LRRK1-211ENST00000538064 CD99L2Q8TCZ2 262 aa18.3■□□□□ 0.52
LRRK1-211ENST00000538064 DBNLQ9UJU6 430 aaKnown RBP18.3■□□□□ 0.52
LRRK1-211ENST00000538064 DDTLA6NHG4 134 aaPredicted RBP18.29■□□□□ 0.52
LRRK1-211ENST00000538064 PHF20L1A8MW92 1017 aa18.29■□□□□ 0.52
LRRK1-211ENST00000538064 MAP3K10Q02779 954 aa18.29■□□□□ 0.52
LRRK1-211ENST00000538064 LRP2BPQ9P2M1 347 aa18.29■□□□□ 0.52
LRRK1-211ENST00000538064 LOC285556D6RIA3 1793 aa18.28■□□□□ 0.52
LRRK1-211ENST00000538064 IGSF3O75054 1194 aa18.28■□□□□ 0.52
LRRK1-211ENST00000538064 ERC1Q8IUD2 1116 aa18.28■□□□□ 0.52
LRRK1-211ENST00000538064 SCYL3Q8IZE3 742 aa18.28■□□□□ 0.52
LRRK1-211ENST00000538064 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.28■□□□□ 0.52
LRRK1-211ENST00000538064 SNRKQ9NRH2 765 aa18.28■□□□□ 0.52
LRRK1-211ENST00000538064 TLR7Q9NYK1 1049 aaKnown RBP18.28■□□□□ 0.52
LRRK1-211ENST00000538064 CYP2E1P05181 493 aaPredicted RBP18.27■□□□□ 0.52
LRRK1-211ENST00000538064 ANKRD23Q86SG2 305 aa18.27■□□□□ 0.52
LRRK1-211ENST00000538064 EAF2Q96CJ1 260 aaPredicted RBP18.27■□□□□ 0.52
LRRK1-211ENST00000538064 OSBPL5Q9H0X9 879 aaPredicted RBP18.27■□□□□ 0.52
LRRK1-211ENST00000538064 DDX19BQ9UMR2 479 aa18.27■□□□□ 0.52
LRRK1-211ENST00000538064 EXOC6BQ9Y2D4 811 aa18.27■□□□□ 0.52
LRRK1-211ENST00000538064 MYH1P12882 1939 aa18.27■□□□□ 0.51
LRRK1-211ENST00000538064 MGAMO43451 1857 aa18.26■□□□□ 0.51
LRRK1-211ENST00000538064 TLR2O60603 784 aa18.26■□□□□ 0.51
LRRK1-211ENST00000538064 CAP1Q01518 475 aa18.26■□□□□ 0.51
LRRK1-211ENST00000538064 NAA16Q6N069 864 aaPredicted RBP18.26■□□□□ 0.51
LRRK1-211ENST00000538064 TEX11Q8IYF3 940 aa18.26■□□□□ 0.51
LRRK1-211ENST00000538064 NOL10Q9BSC4 688 aaKnown RBP18.26■□□□□ 0.51
LRRK1-211ENST00000538064 CCDC8Q9H0W5 538 aaPredicted RBP18.26■□□□□ 0.51
LRRK1-211ENST00000538064 EFCC1Q9HA90 598 aa18.26■□□□□ 0.51
LRRK1-211ENST00000538064 PICK1Q9NRD5 415 aa18.26■□□□□ 0.51
LRRK1-211ENST00000538064 RCAN3Q9UKA8 241 aa18.26■□□□□ 0.51
LRRK1-211ENST00000538064 PDE4DIPQ5VU43 2346 aa18.26■□□□□ 0.51
LRRK1-211ENST00000538064 CXCL11O14625 94 aa18.25■□□□□ 0.51
LRRK1-211ENST00000538064 TBC1D12O60347 775 aa18.25■□□□□ 0.51
LRRK1-211ENST00000538064 ZAP70P43403 619 aa18.25■□□□□ 0.51
LRRK1-211ENST00000538064 MOGSQ13724 837 aa18.25■□□□□ 0.51
LRRK1-211ENST00000538064 HSP90AB4PQ58FF6 505 aa18.25■□□□□ 0.51
LRRK1-211ENST00000538064 PTPN22Q9Y2R2 807 aa18.25■□□□□ 0.51
LRRK1-211ENST00000538064 ADGRA2Q96PE1 1338 aa18.24■□□□□ 0.51
LRRK1-211ENST00000538064 DDX60LQ5H9U9 1706 aaKnown RBP18.24■□□□□ 0.51
LRRK1-211ENST00000538064 TNRC18O15417 2968 aaPredicted RBP18.24■□□□□ 0.51
LRRK1-211ENST00000538064 CTNND1O60716 968 aaKnown RBP18.24■□□□□ 0.51
LRRK1-211ENST00000538064 BAG3O95817 575 aa18.24■□□□□ 0.51
LRRK1-211ENST00000538064 PLCG2P16885 1265 aa18.24■□□□□ 0.51
LRRK1-211ENST00000538064 PTPRAP18433 802 aa18.24■□□□□ 0.51
LRRK1-211ENST00000538064 SH3RF3Q8TEJ3 882 aaPredicted RBP18.24■□□□□ 0.51
LRRK1-211ENST00000538064 PIH1D3Q9NQM4 214 aaKnown RBP18.24■□□□□ 0.51
LRRK1-211ENST00000538064 AATFQ9NY61 560 aaKnown RBP eCLIP18.24■□□□□ 0.51
LRRK1-211ENST00000538064 COG6Q9Y2V7 657 aa18.24■□□□□ 0.51
LRRK1-211ENST00000538064 NAV1Q8NEY1 1877 aa18.23■□□□□ 0.51
LRRK1-211ENST00000538064 A0A0G2JLL6 359 aaPredicted RBP18.23■□□□□ 0.51
LRRK1-211ENST00000538064 SLURP2P0DP57 97 aa18.23■□□□□ 0.51
LRRK1-211ENST00000538064 PPP4CP60510 307 aa18.23■□□□□ 0.51
LRRK1-211ENST00000538064 ARHGEF6Q15052 776 aa18.23■□□□□ 0.51
LRRK1-211ENST00000538064 PRRT2Q7Z6L0 340 aaPredicted RBP18.23■□□□□ 0.51
LRRK1-211ENST00000538064 ADGRA1Q86SQ6 560 aa18.23■□□□□ 0.51
LRRK1-211ENST00000538064 AACSQ86V21 672 aa18.23■□□□□ 0.51
LRRK1-211ENST00000538064 RPAP2Q8IXW5 612 aaPredicted RBP18.23■□□□□ 0.51
LRRK1-211ENST00000538064 ZBTB40Q9NUA8 1239 aa18.23■□□□□ 0.51
LRRK1-211ENST00000538064 ZHX2Q9Y6X8 837 aa18.23■□□□□ 0.51
LRRK1-211ENST00000538064 PDHXO00330 501 aa18.22■□□□□ 0.51
LRRK1-211ENST00000538064 HMMRO75330 724 aa18.22■□□□□ 0.51
LRRK1-211ENST00000538064 LACTBP83111 547 aaPredicted RBP18.22■□□□□ 0.51
LRRK1-211ENST00000538064 CHMP4BQ9H444 224 aaKnown RBP18.22■□□□□ 0.51
LRRK1-211ENST00000538064 AFG3L2Q9Y4W6 797 aa18.22■□□□□ 0.51
LRRK1-211ENST00000538064 FLT1P17948 1338 aa18.22■□□□□ 0.51
LRRK1-211ENST00000538064 MYH7P12883 1935 aa18.21■□□□□ 0.51
LRRK1-211ENST00000538064 FAM196BA6NMK8 535 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms