RNA–Protein interactions for RNA: ENST00000537856.7

TCF4-206, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-206ENST00000537856 ERO1BQ86YB8 467 aa12.89□□□□□ -0.35
TCF4-206ENST00000537856 WRNIP1Q96S55 665 aa12.89□□□□□ -0.35
TCF4-206ENST00000537856 TRPA1O75762 1119 aa12.89□□□□□ -0.35
TCF4-206ENST00000537856 RGS3P49796 1198 aa12.89□□□□□ -0.35
TCF4-206ENST00000537856 CACNB3P54284 484 aa12.89□□□□□ -0.35
TCF4-206ENST00000537856 PPP4CP60510 307 aa12.89□□□□□ -0.35
TCF4-206ENST00000537856 LRRFIP1Q32MZ4 808 aaKnown RBP12.89□□□□□ -0.35
TCF4-206ENST00000537856 IFFO2Q5TF58 517 aa12.89□□□□□ -0.35
TCF4-206ENST00000537856 ZSCAN25Q6NSZ9 544 aa12.89□□□□□ -0.35
TCF4-206ENST00000537856 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.89□□□□□ -0.35
TCF4-206ENST00000537856 TRIM34Q9BYJ4 488 aa12.89□□□□□ -0.35
TCF4-206ENST00000537856 BACH2Q9BYV9 841 aa12.89□□□□□ -0.35
TCF4-206ENST00000537856 TBC1D2Q9BYX2 928 aa12.89□□□□□ -0.35
TCF4-206ENST00000537856 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.89□□□□□ -0.352e-6■■■■■ 33.9
TCF4-206ENST00000537856 ZAP70P43403 619 aa12.88□□□□□ -0.35
TCF4-206ENST00000537856 TEX11Q8IYF3 940 aa12.88□□□□□ -0.35
TCF4-206ENST00000537856 CFHR5Q9BXR6 569 aa12.88□□□□□ -0.35
TCF4-206ENST00000537856 IL1RAPL2Q9NP60 686 aa12.88□□□□□ -0.35
TCF4-206ENST00000537856 ZCCHC17Q9NP64 241 aaKnown RBP12.88□□□□□ -0.35
TCF4-206ENST00000537856 PICK1Q9NRD5 415 aa12.88□□□□□ -0.35
TCF4-206ENST00000537856 SNRKQ9NRH2 765 aa12.88□□□□□ -0.35
TCF4-206ENST00000537856 APBB1O00213 710 aa12.87□□□□□ -0.35
TCF4-206ENST00000537856 TBC1D12O60347 775 aa12.87□□□□□ -0.35
TCF4-206ENST00000537856 IDH1O75874 414 aaKnown RBP12.87□□□□□ -0.35
TCF4-206ENST00000537856 CYP2E1P05181 493 aaPredicted RBP12.87□□□□□ -0.35
TCF4-206ENST00000537856 CETPP11597 493 aa12.87□□□□□ -0.35
TCF4-206ENST00000537856 PDE4AP27815 886 aa12.87□□□□□ -0.35
TCF4-206ENST00000537856 PPATQ06203 517 aa12.87□□□□□ -0.35
TCF4-206ENST00000537856 COL13A1Q5TAT6 717 aaPredicted RBP12.87□□□□□ -0.35
TCF4-206ENST00000537856 TBC1D9Q6ZT07 1266 aa12.87□□□□□ -0.35
TCF4-206ENST00000537856 OPTNQ96CV9 577 aa12.87□□□□□ -0.35
TCF4-206ENST00000537856 ELP3Q9H9T3 547 aa12.87□□□□□ -0.35
TCF4-206ENST00000537856 SPDYE5A6NIY4 337 aa12.87□□□□□ -0.35
TCF4-206ENST00000537856 CYP7A1P22680 504 aa12.87□□□□□ -0.35
TCF4-206ENST00000537856 SNAPC2Q13487 334 aa12.87□□□□□ -0.35
TCF4-206ENST00000537856 C20orf194Q5TEA3 1177 aa12.87□□□□□ -0.35
TCF4-206ENST00000537856 DCTPP1Q9H773 170 aa12.87□□□□□ -0.35
TCF4-206ENST00000537856 FAM198AQ9UFP1 575 aa12.87□□□□□ -0.35
TCF4-206ENST00000537856 HERC5Q9UII4 1024 aaKnown RBP12.87□□□□□ -0.35
TCF4-206ENST00000537856 AOX1Q06278 1338 aa12.87□□□□□ -0.35
TCF4-206ENST00000537856 COL2A1P02458 1487 aaPredicted RBP12.86□□□□□ -0.35
TCF4-206ENST00000537856 HLA-DOAP06340 250 aa12.86□□□□□ -0.35
TCF4-206ENST00000537856 PPIL2Q13356 520 aa12.86□□□□□ -0.35
TCF4-206ENST00000537856 PICALMQ13492 652 aa12.86□□□□□ -0.35
TCF4-206ENST00000537856 VGLL4Q14135 290 aa12.86□□□□□ -0.35
TCF4-206ENST00000537856 PKN2Q16513 984 aaKnown RBP12.86□□□□□ -0.35
TCF4-206ENST00000537856 NOL9Q5SY16 702 aaKnown RBP12.86□□□□□ -0.35
TCF4-206ENST00000537856 SIRT2Q8IXJ6 389 aa12.86□□□□□ -0.35
TCF4-206ENST00000537856 GINM1Q9NU53 330 aa12.86□□□□□ -0.35
TCF4-206ENST00000537856 ZNF112Q9UJU3 913 aa12.86□□□□□ -0.35
TCF4-206ENST00000537856 TAOK2Q9UL54 1235 aa12.86□□□□□ -0.35
TCF4-206ENST00000537856 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.86□□□□□ -0.35
TCF4-206ENST00000537856 SSC5DA1L4H1 1573 aa12.86□□□□□ -0.35
TCF4-206ENST00000537856 TESPA1A2RU30 521 aaPredicted RBP12.85□□□□□ -0.35
TCF4-206ENST00000537856 ATP5JP18859 108 aa12.85□□□□□ -0.35
TCF4-206ENST00000537856 MKRN3Q13064 507 aaKnown RBP12.85□□□□□ -0.35
TCF4-206ENST00000537856 PI16Q6UXB8 463 aa12.85□□□□□ -0.35
TCF4-206ENST00000537856 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.85□□□□□ -0.35
TCF4-206ENST00000537856 IFNL1Q8IU54 200 aa12.85□□□□□ -0.35
TCF4-206ENST00000537856 FOXP4Q8IVH2 680 aaPredicted RBP12.85□□□□□ -0.35
TCF4-206ENST00000537856 CLMNQ96JQ2 1002 aa12.85□□□□□ -0.35
TCF4-206ENST00000537856 PI4KBQ9UBF8 816 aa12.85□□□□□ -0.35
TCF4-206ENST00000537856 AKAP11Q9UKA4 1901 aa12.85□□□□□ -0.35
TCF4-206ENST00000537856 ERC2O15083 957 aa12.85□□□□□ -0.35
TCF4-206ENST00000537856 CTNND1O60716 968 aaKnown RBP12.85□□□□□ -0.35
TCF4-206ENST00000537856 HSP90AA1P07900 732 aaKnown RBP12.85□□□□□ -0.35
TCF4-206ENST00000537856 RHBDL3P58872 404 aa12.85□□□□□ -0.35
TCF4-206ENST00000537856 NFIAQ12857 509 aa12.85□□□□□ -0.35
TCF4-206ENST00000537856 MIGA2Q7L4E1 593 aa12.85□□□□□ -0.35
TCF4-206ENST00000537856 ZIC5Q96T25 663 aa12.85□□□□□ -0.35
TCF4-206ENST00000537856 OSBPL5Q9H0X9 879 aaPredicted RBP12.85□□□□□ -0.35
TCF4-206ENST00000537856 ZFYVE28Q9HCC9 887 aa12.85□□□□□ -0.35
TCF4-206ENST00000537856 MYH2Q9UKX2 1941 aa12.84□□□□□ -0.35
TCF4-206ENST00000537856 USP5P45974 858 aa12.84□□□□□ -0.35
TCF4-206ENST00000537856 MAP3K10Q02779 954 aa12.84□□□□□ -0.35
TCF4-206ENST00000537856 ATRNL1Q5VV63 1379 aa12.84□□□□□ -0.35
TCF4-206ENST00000537856 AMOTL1Q8IY63 956 aa12.84□□□□□ -0.35
TCF4-206ENST00000537856 GCC1Q96CN9 775 aa12.84□□□□□ -0.35
TCF4-206ENST00000537856 OTUD5Q96G74 571 aa12.84□□□□□ -0.35
TCF4-206ENST00000537856 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.84□□□□□ -0.35
TCF4-206ENST00000537856 AATFQ9NY61 560 aaKnown RBP eCLIP12.84□□□□□ -0.35
TCF4-206ENST00000537856 TLR7Q9NYK1 1049 aaKnown RBP12.84□□□□□ -0.35
TCF4-206ENST00000537856 CXCL11O14625 94 aa12.83□□□□□ -0.35
TCF4-206ENST00000537856 FASTKD5Q7L8L6 764 aaKnown RBP12.83□□□□□ -0.35
TCF4-206ENST00000537856 TTC6Q86TZ1 520 aa12.83□□□□□ -0.35
TCF4-206ENST00000537856 SCYL3Q8IZE3 742 aa12.83□□□□□ -0.35
TCF4-206ENST00000537856 CRACR2BQ8N4Y2 399 aaPredicted RBP12.83□□□□□ -0.35
TCF4-206ENST00000537856 MAGEB6Q8N7X4 407 aa12.83□□□□□ -0.35
TCF4-206ENST00000537856 DNAJC2Q99543 621 aaKnown RBP12.83□□□□□ -0.35
TCF4-206ENST00000537856 CRNKL1Q9BZJ0 848 aaKnown RBP12.83□□□□□ -0.35
TCF4-206ENST00000537856 PIH1D3Q9NQM4 214 aaKnown RBP12.83□□□□□ -0.35
TCF4-206ENST00000537856 ECHDC1Q9NTX5 307 aa12.83□□□□□ -0.35
TCF4-206ENST00000537856 PAG1Q9NWQ8 432 aa12.83□□□□□ -0.35
TCF4-206ENST00000537856 CCL15-CCL14A0A0B4J2E2 113 aa12.83□□□□□ -0.36
TCF4-206ENST00000537856 FKTNO75072 461 aa12.83□□□□□ -0.36
TCF4-206ENST00000537856 CCL15Q16663 113 aa12.83□□□□□ -0.36
TCF4-206ENST00000537856 SLC9C2Q5TAH2 1124 aa12.83□□□□□ -0.36
TCF4-206ENST00000537856 RWDD1Q9H446 243 aaPredicted RBP12.83□□□□□ -0.36
TCF4-206ENST00000537856 AS3MTQ9HBK9 375 aa12.83□□□□□ -0.36
TCF4-206ENST00000537856 MAGEB6P1A0A0J9YX57 407 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms