RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 SF3A1Q15459 793 aaKnown RBP18.21■□□□□ 0.51
MKS1-204ENST00000537529 NTRK3Q16288 839 aa18.21■□□□□ 0.51
MKS1-204ENST00000537529 AMIGO3Q86WK7 504 aa18.21■□□□□ 0.51
MKS1-204ENST00000537529 LINC00301Q8NCQ3 95 aa18.21■□□□□ 0.51
MKS1-204ENST00000537529 SDR42E1Q8WUS8 393 aa18.21■□□□□ 0.51
MKS1-204ENST00000537529 MRPS27Q92552 414 aaKnown RBP18.21■□□□□ 0.51
MKS1-204ENST00000537529 MYL10Q9BUA6 226 aa18.21■□□□□ 0.51
MKS1-204ENST00000537529 KIF28PB7ZC32 967 aa18.21■□□□□ 0.51
MKS1-204ENST00000537529 CAVIN2O95810 425 aa18.21■□□□□ 0.51
MKS1-204ENST00000537529 SSRP1Q08945 709 aaKnown RBP18.21■□□□□ 0.51
MKS1-204ENST00000537529 ANO6Q4KMQ2 910 aa18.21■□□□□ 0.51
MKS1-204ENST00000537529 TMED8Q6PL24 325 aaPredicted RBP18.21■□□□□ 0.51
MKS1-204ENST00000537529 WASF1Q92558 559 aa18.21■□□□□ 0.51
MKS1-204ENST00000537529 ESR2Q92731 530 aa18.21■□□□□ 0.51
MKS1-204ENST00000537529 PHKBQ93100 1093 aa18.21■□□□□ 0.51
MKS1-204ENST00000537529 FAM217BQ9NTX9 383 aaPredicted RBP18.21■□□□□ 0.51
MKS1-204ENST00000537529 PCDHA7Q9UN72 937 aa18.21■□□□□ 0.51
MKS1-204ENST00000537529 AFF2P51816 1311 aa18.21■□□□□ 0.5
MKS1-204ENST00000537529 MINDY4BA8MYZ0 360 aa18.2■□□□□ 0.5
MKS1-204ENST00000537529 KLRK1P26718 216 aa18.2■□□□□ 0.5
MKS1-204ENST00000537529 KRT40Q6A162 431 aa18.2■□□□□ 0.5
MKS1-204ENST00000537529 ADALQ6DHV7 355 aa18.2■□□□□ 0.5
MKS1-204ENST00000537529 CCDC24Q8N4L8 307 aa18.2■□□□□ 0.5
MKS1-204ENST00000537529 UBAC1Q9BSL1 405 aa18.2■□□□□ 0.5
MKS1-204ENST00000537529 GJB4Q9NTQ9 266 aa18.2■□□□□ 0.5
MKS1-204ENST00000537529 CLIC4Q9Y696 253 aa18.2■□□□□ 0.5
MKS1-204ENST00000537529 ZBTB22O15209 634 aa18.19■□□□□ 0.5
MKS1-204ENST00000537529 ZNF500O60304 480 aaPredicted RBP18.19■□□□□ 0.5
MKS1-204ENST00000537529 RANBP6O60518 1105 aaKnown RBP18.19■□□□□ 0.5
MKS1-204ENST00000537529 FMNL1O95466 1100 aaPredicted RBP18.19■□□□□ 0.5
MKS1-204ENST00000537529 TM4SF1P30408 202 aa18.19■□□□□ 0.5
MKS1-204ENST00000537529 GNL2Q13823 731 aaKnown RBP18.19■□□□□ 0.5
MKS1-204ENST00000537529 RTN1Q16799 776 aa18.19■□□□□ 0.5
MKS1-204ENST00000537529 ENGASEQ8NFI3 743 aa18.19■□□□□ 0.5
MKS1-204ENST00000537529 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.19■□□□□ 0.5
MKS1-204ENST00000537529 TNRC6CQ9HCJ0 1690 aaKnown RBP18.19■□□□□ 0.5
MKS1-204ENST00000537529 CCDC196A0A1B0GTZ2 297 aa18.19■□□□□ 0.5
MKS1-204ENST00000537529 SPTLC2O15270 562 aa18.19■□□□□ 0.5
MKS1-204ENST00000537529 IFNAR1P17181 557 aa18.19■□□□□ 0.5
MKS1-204ENST00000537529 ADRA2BP18089 450 aa18.19■□□□□ 0.5
MKS1-204ENST00000537529 DYNLL1P63167 89 aaKnown RBP18.19■□□□□ 0.5
MKS1-204ENST00000537529 SNW1Q13573 536 aaKnown RBP18.19■□□□□ 0.5
MKS1-204ENST00000537529 ANO1Q5XXA6 986 aa18.19■□□□□ 0.5
MKS1-204ENST00000537529 FAM196AQ6ZSG2 479 aa18.19■□□□□ 0.5
MKS1-204ENST00000537529 AIFM3Q96NN9 605 aa18.19■□□□□ 0.5
MKS1-204ENST00000537529 SLC26A6Q9BXS9 759 aa18.19■□□□□ 0.5
MKS1-204ENST00000537529 TFCP2L1Q9NZI6 479 aa18.19■□□□□ 0.5
MKS1-204ENST00000537529 MAST2Q6P0Q8 1798 aa18.18■□□□□ 0.5
MKS1-204ENST00000537529 SBF2Q86WG5 1849 aa18.18■□□□□ 0.5
MKS1-204ENST00000537529 ONECUT3O60422 494 aaPredicted RBP18.18■□□□□ 0.5
MKS1-204ENST00000537529 PCP11498 1178 aaKnown RBP18.18■□□□□ 0.5
MKS1-204ENST00000537529 PLCB2Q00722 1185 aa18.18■□□□□ 0.5
MKS1-204ENST00000537529 TRIM22Q8IYM9 498 aa18.18■□□□□ 0.5
MKS1-204ENST00000537529 NSUN4Q96CB9 384 aaKnown RBP18.18■□□□□ 0.5
MKS1-204ENST00000537529 ZKSCAN3Q9BRR0 538 aa18.18■□□□□ 0.5
MKS1-204ENST00000537529 CBX8Q9HC52 389 aa18.18■□□□□ 0.5
MKS1-204ENST00000537529 MECOMQ03112 1051 aa18.18■□□□□ 0.5
MKS1-204ENST00000537529 SEPT12Q8IYM1 358 aa18.18■□□□□ 0.5
MKS1-204ENST00000537529 STK11IPQ8N1F8 1099 aa18.18■□□□□ 0.5
MKS1-204ENST00000537529 CNBD1Q8NA66 436 aa18.18■□□□□ 0.5
MKS1-204ENST00000537529 BCL11BQ9C0K0 894 aaPredicted RBP18.18■□□□□ 0.5
MKS1-204ENST00000537529 TRPC5Q9UL62 973 aaPredicted RBP18.18■□□□□ 0.5
MKS1-204ENST00000537529 ECM29Q5VYK3 1845 aa18.17■□□□□ 0.5
MKS1-204ENST00000537529 DUOX1Q9NRD9 1551 aa18.17■□□□□ 0.5
MKS1-204ENST00000537529 CHAF1AQ13111 956 aaPredicted RBP18.17■□□□□ 0.5
MKS1-204ENST00000537529 GRAPQ13588 217 aa18.17■□□□□ 0.5
MKS1-204ENST00000537529 NFIXQ14938 502 aa18.17■□□□□ 0.5
MKS1-204ENST00000537529 STX1AQ16623 288 aa18.17■□□□□ 0.5
MKS1-204ENST00000537529 ZNF654Q8IZM8 581 aa18.17■□□□□ 0.5
MKS1-204ENST00000537529 GRAPLQ8TC17 118 aaPredicted RBP18.17■□□□□ 0.5
MKS1-204ENST00000537529 ZNF384Q8TF68 577 aa18.17■□□□□ 0.5
MKS1-204ENST00000537529 SPTY2D1Q68D10 685 aaPredicted RBP18.16■□□□□ 0.5
MKS1-204ENST00000537529 LUZP1Q86V48 1076 aa18.16■□□□□ 0.5
MKS1-204ENST00000537529 CRNKL1Q9BZJ0 848 aaKnown RBP18.16■□□□□ 0.5
MKS1-204ENST00000537529 MYH13Q9UKX3 1938 aa18.16■□□□□ 0.5
MKS1-204ENST00000537529 FMR1NBQ8N0W7 255 aaPredicted RBP18.16■□□□□ 0.5
MKS1-204ENST00000537529 TDRD7Q8NHU6 1098 aaKnown RBP18.16■□□□□ 0.5
MKS1-204ENST00000537529 TNKSO95271 1327 aa18.15■□□□□ 0.5
MKS1-204ENST00000537529 IRS2Q9Y4H2 1338 aa18.15■□□□□ 0.5
MKS1-204ENST00000537529 IGSF3O75054 1194 aa18.15■□□□□ 0.5
MKS1-204ENST00000537529 U2AF2P26368 475 aaKnown RBP eCLIP18.15■□□□□ 0.5
MKS1-204ENST00000537529 ZNF165P49910 485 aa18.15■□□□□ 0.5
MKS1-204ENST00000537529 PPP2R5BQ15173 497 aa18.15■□□□□ 0.5
MKS1-204ENST00000537529 JMYQ8N9B5 988 aa18.15■□□□□ 0.5
MKS1-204ENST00000537529 DNAJC25Q9H1X3 360 aa18.15■□□□□ 0.5
MKS1-204ENST00000537529 LEMD3Q9Y2U8 911 aa18.15■□□□□ 0.5
MKS1-204ENST00000537529 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.15■□□□□ 0.5
MKS1-204ENST00000537529 SLC39A14Q15043 492 aa18.14■□□□□ 0.5
MKS1-204ENST00000537529 SEC23AQ15436 765 aa18.14■□□□□ 0.5
MKS1-204ENST00000537529 AP5Z1O43299 807 aa18.14■□□□□ 0.49
MKS1-204ENST00000537529 DEXIO95424 95 aa18.14■□□□□ 0.49
MKS1-204ENST00000537529 SAFBQ15424 915 aaKnown RBP eCLIP18.14■□□□□ 0.49
MKS1-204ENST00000537529 CTR9Q6PD62 1173 aa18.14■□□□□ 0.49
MKS1-204ENST00000537529 FANCBQ8NB91 859 aa18.14■□□□□ 0.49
MKS1-204ENST00000537529 ZSCAN10Q96SZ4 725 aaPredicted RBP18.14■□□□□ 0.49
MKS1-204ENST00000537529 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.14■□□□□ 0.49
MKS1-204ENST00000537529 ANKIB1Q9P2G1 1089 aa18.14■□□□□ 0.49
MKS1-204ENST00000537529 TPM3P06753 285 aa18.13■□□□□ 0.49
MKS1-204ENST00000537529 FGRP09769 529 aa18.13■□□□□ 0.49
MKS1-204ENST00000537529 NDUFA8P51970 172 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms