RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 SLFNL1Q499Z3 407 aa19.37■□□□□ 0.69
VAMP1-205ENST00000535927 TBC1D10BQ4KMP7 808 aaPredicted RBP19.37■□□□□ 0.69
VAMP1-205ENST00000535927 IFNL3Q8IZI9 196 aa19.37■□□□□ 0.69
VAMP1-205ENST00000535927 KLRG1Q96E93 195 aa19.37■□□□□ 0.69
VAMP1-205ENST00000535927 HOOK2Q96ED9 719 aa19.37■□□□□ 0.69
VAMP1-205ENST00000535927 USP26Q9BXU7 913 aa19.37■□□□□ 0.69
VAMP1-205ENST00000535927 LSG1Q9H089 658 aaKnown RBP19.37■□□□□ 0.69
VAMP1-205ENST00000535927 TDRD3Q9H7E2 651 aaKnown RBP19.37■□□□□ 0.69
VAMP1-205ENST00000535927 DCP1AQ9NPI6 582 aaPredicted RBP19.37■□□□□ 0.69
VAMP1-205ENST00000535927 ARPP21Q9UBL0 812 aaPredicted RBP19.37■□□□□ 0.69
VAMP1-205ENST00000535927 CCDC129Q6ZRS4 1044 aa19.36■□□□□ 0.69
VAMP1-205ENST00000535927 TTC6Q86TZ1 520 aa19.36■□□□□ 0.69
VAMP1-205ENST00000535927 TGFBRAP1Q8WUH2 860 aa19.36■□□□□ 0.69
VAMP1-205ENST00000535927 FAM151AQ8WW52 585 aa19.36■□□□□ 0.69
VAMP1-205ENST00000535927 NAPBQ9H115 298 aa19.36■□□□□ 0.69
VAMP1-205ENST00000535927 CDK5RAP2Q96SN8 1893 aa19.35■□□□□ 0.69
VAMP1-205ENST00000535927 POTECB2RU33 542 aa19.35■□□□□ 0.69
VAMP1-205ENST00000535927 FGAP02671 866 aa19.35■□□□□ 0.69
VAMP1-205ENST00000535927 SLC3A2P08195 630 aaKnown RBP19.35■□□□□ 0.69
VAMP1-205ENST00000535927 NBPF9Q3BBW0 867 aa19.35■□□□□ 0.69
VAMP1-205ENST00000535927 RBM26Q5T8P6 1007 aaKnown RBP19.35■□□□□ 0.69
VAMP1-205ENST00000535927 ZNF287Q9HBT7 754 aa19.35■□□□□ 0.69
VAMP1-205ENST00000535927 TDO2P48775 406 aa19.34■□□□□ 0.69
VAMP1-205ENST00000535927 IMMTQ16891 758 aaKnown RBP19.34■□□□□ 0.69
VAMP1-205ENST00000535927 TSGA10IPQ3SY00 556 aa19.34■□□□□ 0.69
VAMP1-205ENST00000535927 FOXP4Q8IVH2 680 aaPredicted RBP19.34■□□□□ 0.69
VAMP1-205ENST00000535927 DCPSQ96C86 337 aaKnown RBP19.34■□□□□ 0.69
VAMP1-205ENST00000535927 OSBPL5Q9H0X9 879 aaPredicted RBP19.34■□□□□ 0.69
VAMP1-205ENST00000535927 IL25Q9H293 177 aa19.34■□□□□ 0.69
VAMP1-205ENST00000535927 ANAPC4Q9UJX5 808 aa19.34■□□□□ 0.69
VAMP1-205ENST00000535927 ATRNL1Q5VV63 1379 aa19.33■□□□□ 0.69
VAMP1-205ENST00000535927 FLT1P17948 1338 aa19.33■□□□□ 0.69
VAMP1-205ENST00000535927 SHTN1A0MZ66 631 aa19.33■□□□□ 0.68
VAMP1-205ENST00000535927 ZKSCAN1P17029 563 aaPredicted RBP19.33■□□□□ 0.68
VAMP1-205ENST00000535927 HIRAP54198 1017 aaPredicted RBP19.33■□□□□ 0.68
VAMP1-205ENST00000535927 ANAPC15P60006 121 aa19.33■□□□□ 0.68
VAMP1-205ENST00000535927 HTRA3P83110 453 aa19.33■□□□□ 0.68
VAMP1-205ENST00000535927 NECTIN1Q15223 517 aa19.33■□□□□ 0.68
VAMP1-205ENST00000535927 TRPM4Q8TD43 1214 aa19.33■□□□□ 0.68
VAMP1-205ENST00000535927 PI4KBQ9UBF8 816 aa19.33■□□□□ 0.68
VAMP1-205ENST00000535927 MYH1P12882 1939 aa19.33■□□□□ 0.68
VAMP1-205ENST00000535927 ZNF213O14771 459 aa19.32■□□□□ 0.68
VAMP1-205ENST00000535927 PRKAB2O43741 272 aa19.32■□□□□ 0.68
VAMP1-205ENST00000535927 POLR3DP05423 398 aaPredicted RBP19.32■□□□□ 0.68
VAMP1-205ENST00000535927 HLA-DOAP06340 250 aa19.32■□□□□ 0.68
VAMP1-205ENST00000535927 PTH1RQ03431 593 aa19.32■□□□□ 0.68
VAMP1-205ENST00000535927 KRT32Q14532 448 aa19.32■□□□□ 0.68
VAMP1-205ENST00000535927 VPS53Q5VIR6 699 aa19.32■□□□□ 0.68
VAMP1-205ENST00000535927 JMYQ8N9B5 988 aa19.32■□□□□ 0.68
VAMP1-205ENST00000535927 SDR42E1Q8WUS8 393 aa19.32■□□□□ 0.68
VAMP1-205ENST00000535927 KCNB2Q92953 911 aa19.32■□□□□ 0.68
VAMP1-205ENST00000535927 EHD4Q9H223 541 aa19.32■□□□□ 0.68
VAMP1-205ENST00000535927 RNF41Q9H4P4 317 aaPredicted RBP19.32■□□□□ 0.68
VAMP1-205ENST00000535927 RRAGCQ9HB90 399 aa19.32■□□□□ 0.68
VAMP1-205ENST00000535927 MCM9Q9NXL9 1143 aa19.32■□□□□ 0.68
VAMP1-205ENST00000535927 FAM198AQ9UFP1 575 aa19.32■□□□□ 0.68
VAMP1-205ENST00000535927 RBM8AQ9Y5S9 174 aaKnown RBP19.32■□□□□ 0.68
VAMP1-205ENST00000535927 HSPA4P34932 840 aa19.31■□□□□ 0.68
VAMP1-205ENST00000535927 COL13A1Q5TAT6 717 aaPredicted RBP19.31■□□□□ 0.68
VAMP1-205ENST00000535927 C12orf60Q5U649 245 aa19.31■□□□□ 0.68
VAMP1-205ENST00000535927 CTR9Q6PD62 1173 aa19.31■□□□□ 0.68
VAMP1-205ENST00000535927 LDHDQ86WU2 507 aa19.31■□□□□ 0.68
VAMP1-205ENST00000535927 MAPKAPK5Q8IW41 473 aa19.31■□□□□ 0.68
VAMP1-205ENST00000535927 SULF1Q8IWU6 871 aa19.31■□□□□ 0.68
VAMP1-205ENST00000535927 VEZTQ9HBM0 779 aa19.31■□□□□ 0.68
VAMP1-205ENST00000535927 PCDHAC2Q9Y5I4 1007 aa19.31■□□□□ 0.68
VAMP1-205ENST00000535927 POLR2AP24928 1970 aaKnown RBP19.3■□□□□ 0.68
VAMP1-205ENST00000535927 ADAMTSL1Q8N6G6 1762 aa19.3■□□□□ 0.68
VAMP1-205ENST00000535927 USP17L12C9JPN9 530 aa19.3■□□□□ 0.68
VAMP1-205ENST00000535927 USP17L21D6R901 530 aa19.3■□□□□ 0.68
VAMP1-205ENST00000535927 FOXP2O15409 715 aa19.3■□□□□ 0.68
VAMP1-205ENST00000535927 TBC1D12O60347 775 aa19.3■□□□□ 0.68
VAMP1-205ENST00000535927 EGFRP00533 1210 aa19.3■□□□□ 0.68
VAMP1-205ENST00000535927 SUPT20HL1Q3ZLR7 823 aa19.3■□□□□ 0.68
VAMP1-205ENST00000535927 ANGEL2Q5VTE6 544 aaKnown RBP19.3■□□□□ 0.68
VAMP1-205ENST00000535927 CDC37L1Q7L3B6 337 aa19.3■□□□□ 0.68
VAMP1-205ENST00000535927 METTL16Q86W50 562 aaKnown RBP19.3■□□□□ 0.68
VAMP1-205ENST00000535927 IL17RAQ96F46 866 aa19.3■□□□□ 0.68
VAMP1-205ENST00000535927 EPB41L4AQ9HCS5 686 aaPredicted RBP19.3■□□□□ 0.68
VAMP1-205ENST00000535927 SWAP70Q9UH65 585 aa19.3■□□□□ 0.68
VAMP1-205ENST00000535927 NAV1Q8NEY1 1877 aa19.29■□□□□ 0.68
VAMP1-205ENST00000535927 CLRN2A0PK11 232 aa19.29■□□□□ 0.68
VAMP1-205ENST00000535927 CAPN15O75808 1086 aa19.29■□□□□ 0.68
VAMP1-205ENST00000535927 NFIAQ12857 509 aa19.29■□□□□ 0.68
VAMP1-205ENST00000535927 DEFB129Q9H1M3 183 aa19.29■□□□□ 0.68
VAMP1-205ENST00000535927 CNNM2Q9H8M5 875 aa19.29■□□□□ 0.68
VAMP1-205ENST00000535927 DDX4Q9NQI0 724 aaKnown RBP19.29■□□□□ 0.68
VAMP1-205ENST00000535927 GGA3Q9NZ52 723 aa19.29■□□□□ 0.68
VAMP1-205ENST00000535927 HERC5Q9UII4 1024 aaKnown RBP19.29■□□□□ 0.68
VAMP1-205ENST00000535927 BAZ2AQ9UIF9 1905 aaKnown RBP19.29■□□□□ 0.68
VAMP1-205ENST00000535927 TCP10L2B9ZVM9 353 aa19.28■□□□□ 0.68
VAMP1-205ENST00000535927 FGRP09769 529 aa19.28■□□□□ 0.68
VAMP1-205ENST00000535927 RBM25P49756 843 aaKnown RBP19.28■□□□□ 0.68
VAMP1-205ENST00000535927 MAP3K10Q02779 954 aa19.28■□□□□ 0.68
VAMP1-205ENST00000535927 PDE4BQ07343 736 aa19.28■□□□□ 0.68
VAMP1-205ENST00000535927 PPARAQ07869 468 aa19.28■□□□□ 0.68
VAMP1-205ENST00000535927 PICALMQ13492 652 aa19.28■□□□□ 0.68
VAMP1-205ENST00000535927 RASA3Q14644 834 aa19.28■□□□□ 0.68
VAMP1-205ENST00000535927 TNS4Q8IZW8 715 aa19.28■□□□□ 0.68
VAMP1-205ENST00000535927 SMC1BQ8NDV3 1235 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms