RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 KCNJ6P48051 423 aa15.37■□□□□ 0.05
HDAC4-214ENST00000535493 MAP3K9P80192 1104 aa15.37■□□□□ 0.05
HDAC4-214ENST00000535493 TAF7LQ5H9L4 462 aa15.37■□□□□ 0.05
HDAC4-214ENST00000535493 RESP18Q5W5W9 173 aa15.37■□□□□ 0.05
HDAC4-214ENST00000535493 APOA5Q6Q788 366 aa15.37■□□□□ 0.05
HDAC4-214ENST00000535493 SERTAD1Q9UHV2 236 aa15.37■□□□□ 0.05
HDAC4-214ENST00000535493 ANGEL1Q9UNK9 670 aaKnown RBP15.37■□□□□ 0.05
HDAC4-214ENST00000535493 H3BQF6 201 aa15.37■□□□□ 0.05
HDAC4-214ENST00000535493 C19orf44Q9H6X5 657 aa15.37■□□□□ 0.05
HDAC4-214ENST00000535493 MAN1B1Q9UKM7 699 aa15.37■□□□□ 0.05
HDAC4-214ENST00000535493 MEGF6O75095 1541 aa15.37■□□□□ 0.05
HDAC4-214ENST00000535493 NR5A1Q13285 461 aa15.37■□□□□ 0.05
HDAC4-214ENST00000535493 CREBRFQ8IUR6 639 aa15.37■□□□□ 0.05
HDAC4-214ENST00000535493 SMYD4Q8IYR2 804 aaPredicted RBP15.37■□□□□ 0.05
HDAC4-214ENST00000535493 PLCD3Q8N3E9 789 aa15.37■□□□□ 0.05
HDAC4-214ENST00000535493 KIFC2Q96AC6 838 aa15.37■□□□□ 0.05
HDAC4-214ENST00000535493 ARFGAP3Q9NP61 516 aa15.37■□□□□ 0.05
HDAC4-214ENST00000535493 LCMT1Q9UIC8 334 aa15.37■□□□□ 0.05
HDAC4-214ENST00000535493 MRFAP1Q9Y605 127 aa15.37■□□□□ 0.05
HDAC4-214ENST00000535493 SNAP23O00161 211 aa15.36■□□□□ 0.05
HDAC4-214ENST00000535493 IARSP41252 1262 aaKnown RBP15.36■□□□□ 0.05
HDAC4-214ENST00000535493 MCAMP43121 646 aa15.36■□□□□ 0.05
HDAC4-214ENST00000535493 RRP12Q5JTH9 1297 aaKnown RBP15.36■□□□□ 0.05
HDAC4-214ENST00000535493 APPBP2Q92624 585 aa15.36■□□□□ 0.05
HDAC4-214ENST00000535493 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.36■□□□□ 0.05
HDAC4-214ENST00000535493 TEX13AQ9BXU3 409 aaPredicted RBP15.36■□□□□ 0.05
HDAC4-214ENST00000535493 UBN2Q6ZU65 1347 aa15.36■□□□□ 0.05
HDAC4-214ENST00000535493 CCP110O43303 1012 aa15.36■□□□□ 0.05
HDAC4-214ENST00000535493 LMAN1P49257 510 aa15.36■□□□□ 0.05
HDAC4-214ENST00000535493 CTDSPL2Q05D32 466 aa15.36■□□□□ 0.05
HDAC4-214ENST00000535493 SPECC1LQ69YQ0 1117 aa15.36■□□□□ 0.05
HDAC4-214ENST00000535493 DCAF5Q96JK2 942 aa15.36■□□□□ 0.05
HDAC4-214ENST00000535493 TRIM34Q9BYJ4 488 aa15.36■□□□□ 0.05
HDAC4-214ENST00000535493 TOMM22Q9NS69 142 aa15.36■□□□□ 0.05
HDAC4-214ENST00000535493 AFDNP55196 1824 aaKnown RBP15.35■□□□□ 0.05
HDAC4-214ENST00000535493 TRIM66O15016 1216 aa15.35■□□□□ 0.05
HDAC4-214ENST00000535493 N4BP1O75113 896 aaKnown RBP15.35■□□□□ 0.05
HDAC4-214ENST00000535493 STAMQ92783 540 aa15.35■□□□□ 0.05
HDAC4-214ENST00000535493 FUT8Q9BYC5 575 aa15.35■□□□□ 0.05
HDAC4-214ENST00000535493 FAM217BQ9NTX9 383 aaPredicted RBP15.35■□□□□ 0.05
HDAC4-214ENST00000535493 ZMYM6O95789 1325 aa15.35■□□□□ 0.05
HDAC4-214ENST00000535493 hCG_1642624A0A1W2PR95 340 aa15.35■□□□□ 0.05
HDAC4-214ENST00000535493 AFMP43652 599 aa15.35■□□□□ 0.05
HDAC4-214ENST00000535493 TOB1P50616 345 aaPredicted RBP15.35■□□□□ 0.05
HDAC4-214ENST00000535493 JMYQ8N9B5 988 aa15.35■□□□□ 0.05
HDAC4-214ENST00000535493 PCDHB6Q9Y5E3 794 aa15.35■□□□□ 0.05
HDAC4-214ENST00000535493 GOLGA8AA7E2F4 631 aa15.34■□□□□ 0.05
HDAC4-214ENST00000535493 ZBTB43O43298 467 aa15.34■□□□□ 0.05
HDAC4-214ENST00000535493 PHACTR2O75167 634 aa15.34■□□□□ 0.05
HDAC4-214ENST00000535493 PPP6R2O75170 966 aa15.34■□□□□ 0.05
HDAC4-214ENST00000535493 MDM2Q00987 491 aaPredicted RBP15.34■□□□□ 0.05
HDAC4-214ENST00000535493 TBX2Q13207 712 aaPredicted RBP15.34■□□□□ 0.05
HDAC4-214ENST00000535493 TRIM29Q14134 588 aa15.34■□□□□ 0.05
HDAC4-214ENST00000535493 POSTNQ15063 836 aa15.34■□□□□ 0.05
HDAC4-214ENST00000535493 LONRF2Q1L5Z9 754 aa15.34■□□□□ 0.05
HDAC4-214ENST00000535493 FBXL16Q8N461 479 aa15.34■□□□□ 0.05
HDAC4-214ENST00000535493 MPHOSPH8Q99549 860 aa15.34■□□□□ 0.05
HDAC4-214ENST00000535493 SRRTQ9BXP5 876 aaKnown RBP15.34■□□□□ 0.05
HDAC4-214ENST00000535493 GPR108Q9NPR9 543 aa15.34■□□□□ 0.05
HDAC4-214ENST00000535493 NWD2Q9ULI1 1742 aa15.34■□□□□ 0.05
HDAC4-214ENST00000535493 SH2B2O14492 632 aaPredicted RBP15.34■□□□□ 0.05
HDAC4-214ENST00000535493 RHOXF2BP0C7M4 288 aa15.34■□□□□ 0.05
HDAC4-214ENST00000535493 TMEM67Q5HYA8 995 aa15.34■□□□□ 0.05
HDAC4-214ENST00000535493 RSRC2Q7L4I2 434 aaKnown RBP15.34■□□□□ 0.05
HDAC4-214ENST00000535493 GPR161Q8N6U8 529 aaKnown RBP15.34■□□□□ 0.05
HDAC4-214ENST00000535493 HELBQ8NG08 1087 aaPredicted RBP15.34■□□□□ 0.05
HDAC4-214ENST00000535493 RHOXF2Q9BQY4 288 aa15.34■□□□□ 0.05
HDAC4-214ENST00000535493 ADAM21Q9UKJ8 722 aa15.34■□□□□ 0.05
HDAC4-214ENST00000535493 RGPD5Q99666 1765 aa15.34■□□□□ 0.05
HDAC4-214ENST00000535493 OVOS2A0A0G2JMS6 1433 aa15.33■□□□□ 0.05
HDAC4-214ENST00000535493 GPTP24298 496 aa15.33■□□□□ 0.05
HDAC4-214ENST00000535493 NTRK3Q16288 839 aa15.33■□□□□ 0.05
HDAC4-214ENST00000535493 SKIDA1Q1XH10 827 aa15.33■□□□□ 0.05
HDAC4-214ENST00000535493 RAD9BQ6WBX8 426 aa15.33■□□□□ 0.05
HDAC4-214ENST00000535493 KRI1Q8N9T8 703 aaKnown RBP15.33■□□□□ 0.05
HDAC4-214ENST00000535493 OXER1Q8TDS5 423 aa15.33■□□□□ 0.05
HDAC4-214ENST00000535493 PDE11AQ9HCR9 933 aa15.33■□□□□ 0.05
HDAC4-214ENST00000535493 FAM205CA6NFA0 338 aa15.33■□□□□ 0.04
HDAC4-214ENST00000535493 TULP2O00295 520 aa15.33■□□□□ 0.04
HDAC4-214ENST00000535493 ZSCAN26Q16670 478 aa15.33■□□□□ 0.04
HDAC4-214ENST00000535493 PNKPQ96T60 521 aa15.33■□□□□ 0.04
HDAC4-214ENST00000535493 PIH1D3Q9NQM4 214 aaKnown RBP15.33■□□□□ 0.04
HDAC4-214ENST00000535493 RNF216Q9NWF9 866 aaPredicted RBP15.33■□□□□ 0.04
HDAC4-214ENST00000535493 WWC3Q9ULE0 1092 aa15.33■□□□□ 0.04
HDAC4-214ENST00000535493 TACC3Q9Y6A5 838 aa15.33■□□□□ 0.04
HDAC4-214ENST00000535493 STX10O60499 249 aa15.32■□□□□ 0.04
HDAC4-214ENST00000535493 RBL2Q08999 1139 aa15.32■□□□□ 0.04
HDAC4-214ENST00000535493 METTL24Q5JXM2 366 aa15.32■□□□□ 0.04
HDAC4-214ENST00000535493 ANKLE2Q86XL3 938 aa15.32■□□□□ 0.04
HDAC4-214ENST00000535493 DIS3L2Q8IYB7 885 aaKnown RBP15.32■□□□□ 0.04
HDAC4-214ENST00000535493 C10orf67Q8IYJ2 551 aa15.32■□□□□ 0.04
HDAC4-214ENST00000535493 CCDC191Q8NCU4 936 aa15.32■□□□□ 0.04
HDAC4-214ENST00000535493 ZSWIM5Q9P217 1185 aa15.32■□□□□ 0.04
HDAC4-214ENST00000535493 CUTAO60888 179 aa15.32■□□□□ 0.04
HDAC4-214ENST00000535493 IGDCC4Q8TDY8 1250 aa15.32■□□□□ 0.04
HDAC4-214ENST00000535493 CHMP4CQ96CF2 233 aa15.32■□□□□ 0.04
HDAC4-214ENST00000535493 UBXN6Q9BZV1 441 aa15.32■□□□□ 0.04
HDAC4-214ENST00000535493 VPS18Q9P253 973 aa15.32■□□□□ 0.04
HDAC4-214ENST00000535493 FEZ2Q9UHY8 353 aaPredicted RBP15.32■□□□□ 0.04
HDAC4-214ENST00000535493 ZNF532Q9HCE3 1301 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms