RNA–Protein interactions for RNA: ENST00000535239.5

MSRB3-205, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-205ENST00000535239 IGF2BP3O00425 579 aaKnown RBP eCLIP18.72■□□□□ 0.59
MSRB3-205ENST00000535239 TBC1D8O95759 1140 aa18.72■□□□□ 0.59
MSRB3-205ENST00000535239 NOL9Q5SY16 702 aaKnown RBP18.72■□□□□ 0.59
MSRB3-205ENST00000535239 MIGA2Q7L4E1 593 aa18.72■□□□□ 0.59
MSRB3-205ENST00000535239 ZKSCAN4Q969J2 545 aaPredicted RBP18.72■□□□□ 0.59
MSRB3-205ENST00000535239 PHF20L1A8MW92 1017 aa18.71■□□□□ 0.59
MSRB3-205ENST00000535239 GPR25O00155 361 aa18.71■□□□□ 0.59
MSRB3-205ENST00000535239 GTF2A2P52657 109 aa18.71■□□□□ 0.59
MSRB3-205ENST00000535239 OTUD7BQ6GQQ9 843 aa18.71■□□□□ 0.59
MSRB3-205ENST00000535239 NAA16Q6N069 864 aaPredicted RBP18.71■□□□□ 0.59
MSRB3-205ENST00000535239 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.71■□□□□ 0.59
MSRB3-205ENST00000535239 CNKSR2Q8WXI2 1034 aa18.71■□□□□ 0.59
MSRB3-205ENST00000535239 PTPN18Q99952 460 aa18.71■□□□□ 0.59
MSRB3-205ENST00000535239 IL1RAPL2Q9NP60 686 aa18.71■□□□□ 0.59
MSRB3-205ENST00000535239 MAST2Q6P0Q8 1798 aa18.7■□□□□ 0.58
MSRB3-205ENST00000535239 AK9Q5TCS8 1911 aa18.7■□□□□ 0.58
MSRB3-205ENST00000535239 DDTLA6NHG4 134 aaPredicted RBP18.7■□□□□ 0.58
MSRB3-205ENST00000535239 TBC1D12O60347 775 aa18.7■□□□□ 0.58
MSRB3-205ENST00000535239 BAG3O95817 575 aa18.7■□□□□ 0.58
MSRB3-205ENST00000535239 PLCG2P16885 1265 aa18.7■□□□□ 0.58
MSRB3-205ENST00000535239 INPP5BP32019 993 aa18.7■□□□□ 0.58
MSRB3-205ENST00000535239 PPATQ06203 517 aa18.7■□□□□ 0.58
MSRB3-205ENST00000535239 PPIL2Q13356 520 aa18.7■□□□□ 0.58
MSRB3-205ENST00000535239 ABHD8Q96I13 439 aa18.7■□□□□ 0.58
MSRB3-205ENST00000535239 MCOLN1Q9GZU1 580 aa18.7■□□□□ 0.58
MSRB3-205ENST00000535239 PIH1D3Q9NQM4 214 aaKnown RBP18.7■□□□□ 0.58
MSRB3-205ENST00000535239 ZNF296Q8WUU4 475 aaPredicted RBP18.69■□□□□ 0.58
MSRB3-205ENST00000535239 BRI3BPQ8WY22 251 aa18.69■□□□□ 0.58
MSRB3-205ENST00000535239 OTUD5Q96G74 571 aa18.69■□□□□ 0.58
MSRB3-205ENST00000535239 R3HDMLQ9H3Y0 253 aa18.69■□□□□ 0.58
MSRB3-205ENST00000535239 DOCK2Q92608 1830 aa18.69■□□□□ 0.58
MSRB3-205ENST00000535239 MYO5AQ9Y4I1 1855 aaKnown RBP18.69■□□□□ 0.58
MSRB3-205ENST00000535239 DGKZQ13574 1117 aa18.68■□□□□ 0.58
MSRB3-205ENST00000535239 NOL10Q9BSC4 688 aaKnown RBP18.68■□□□□ 0.58
MSRB3-205ENST00000535239 ZCCHC17Q9NP64 241 aaKnown RBP18.68■□□□□ 0.58
MSRB3-205ENST00000535239 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.68■□□□□ 0.58
MSRB3-205ENST00000535239 IRF6O14896 467 aa18.67■□□□□ 0.58
MSRB3-205ENST00000535239 CETPP11597 493 aa18.67■□□□□ 0.58
MSRB3-205ENST00000535239 PICALMQ13492 652 aa18.67■□□□□ 0.58
MSRB3-205ENST00000535239 CTU1Q7Z7A3 348 aaKnown RBP18.67■□□□□ 0.58
MSRB3-205ENST00000535239 ADGRA1Q86SQ6 560 aa18.67■□□□□ 0.58
MSRB3-205ENST00000535239 CERS3Q8IU89 383 aa18.67■□□□□ 0.58
MSRB3-205ENST00000535239 ZSCAN29Q8IWY8 852 aaPredicted RBP18.67■□□□□ 0.58
MSRB3-205ENST00000535239 TEX11Q8IYF3 940 aa18.67■□□□□ 0.58
MSRB3-205ENST00000535239 OSBPL5Q9H0X9 879 aaPredicted RBP18.67■□□□□ 0.58
MSRB3-205ENST00000535239 KCNH4Q9UQ05 1017 aa18.67■□□□□ 0.58
MSRB3-205ENST00000535239 CCL15-CCL14A0A0B4J2E2 113 aa18.66■□□□□ 0.58
MSRB3-205ENST00000535239 FKTNO75072 461 aa18.66■□□□□ 0.58
MSRB3-205ENST00000535239 IFIT2P09913 472 aaKnown RBP18.66■□□□□ 0.58
MSRB3-205ENST00000535239 RRP1P56182 461 aaKnown RBP18.66■□□□□ 0.58
MSRB3-205ENST00000535239 SNAPC2Q13487 334 aa18.66■□□□□ 0.58
MSRB3-205ENST00000535239 TTF1Q15361 905 aaPredicted RBP18.66■□□□□ 0.58
MSRB3-205ENST00000535239 CCL15Q16663 113 aa18.66■□□□□ 0.58
MSRB3-205ENST00000535239 SH3RF3Q8TEJ3 882 aaPredicted RBP18.66■□□□□ 0.58
MSRB3-205ENST00000535239 ANTXR1Q9H6X2 564 aa18.66■□□□□ 0.58
MSRB3-205ENST00000535239 DCTPP1Q9H773 170 aa18.66■□□□□ 0.58
MSRB3-205ENST00000535239 AATFQ9NY61 560 aaKnown RBP eCLIP18.66■□□□□ 0.58
MSRB3-205ENST00000535239 CTNND1O60716 968 aaKnown RBP18.65■□□□□ 0.58
MSRB3-205ENST00000535239 MAP3K12Q12852 859 aa18.65■□□□□ 0.58
MSRB3-205ENST00000535239 PKN2Q16513 984 aaKnown RBP18.65■□□□□ 0.58
MSRB3-205ENST00000535239 LRRCC1Q9C099 1032 aa18.65■□□□□ 0.58
MSRB3-205ENST00000535239 DHX36Q9H2U1 1008 aaKnown RBP18.65■□□□□ 0.58
MSRB3-205ENST00000535239 APBB1O00213 710 aa18.64■□□□□ 0.57
MSRB3-205ENST00000535239 CXCL11O14625 94 aa18.64■□□□□ 0.57
MSRB3-205ENST00000535239 IDH1O75874 414 aaKnown RBP18.64■□□□□ 0.57
MSRB3-205ENST00000535239 ATP5JP18859 108 aa18.64■□□□□ 0.57
MSRB3-205ENST00000535239 CYP7A1P22680 504 aa18.64■□□□□ 0.57
MSRB3-205ENST00000535239 CRHR2Q13324 411 aa18.64■□□□□ 0.57
MSRB3-205ENST00000535239 METTL16Q86W50 562 aaKnown RBP18.64■□□□□ 0.57
MSRB3-205ENST00000535239 SCYL3Q8IZE3 742 aa18.64■□□□□ 0.57
MSRB3-205ENST00000535239 HERC5Q9UII4 1024 aaKnown RBP18.64■□□□□ 0.57
MSRB3-205ENST00000535239 FAM43AQ8N2R8 423 aa18.63■□□□□ 0.57
MSRB3-205ENST00000535239 PI4KBQ9UBF8 816 aa18.63■□□□□ 0.57
MSRB3-205ENST00000535239 NDUFB9Q9Y6M9 179 aa18.63■□□□□ 0.57
MSRB3-205ENST00000535239 FOCADQ5VW36 1801 aa18.63■□□□□ 0.57
MSRB3-205ENST00000535239 BTBD19C9JJ37 291 aa18.62■□□□□ 0.57
MSRB3-205ENST00000535239 CAPN15O75808 1086 aa18.62■□□□□ 0.57
MSRB3-205ENST00000535239 PTPRAP18433 802 aa18.62■□□□□ 0.57
MSRB3-205ENST00000535239 MAGEB6Q8N7X4 407 aa18.62■□□□□ 0.57
MSRB3-205ENST00000535239 CDK5RAP2Q96SN8 1893 aa18.62■□□□□ 0.57
MSRB3-205ENST00000535239 FLT1P17948 1338 aa18.61■□□□□ 0.57
MSRB3-205ENST00000535239 MOGSQ13724 837 aa18.61■□□□□ 0.57
MSRB3-205ENST00000535239 ANKRD23Q86SG2 305 aa18.61■□□□□ 0.57
MSRB3-205ENST00000535239 FOXP4Q8IVH2 680 aaPredicted RBP18.61■□□□□ 0.57
MSRB3-205ENST00000535239 TGFBRAP1Q8WUH2 860 aa18.61■□□□□ 0.57
MSRB3-205ENST00000535239 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.61■□□□□ 0.57
MSRB3-205ENST00000535239 ZFYVE28Q9HCC9 887 aa18.61■□□□□ 0.57
MSRB3-205ENST00000535239 PICK1Q9NRD5 415 aa18.61■□□□□ 0.57
MSRB3-205ENST00000535239 AFG3L2Q9Y4W6 797 aa18.61■□□□□ 0.57
MSRB3-205ENST00000535239 PCDHB15Q9Y5E8 787 aa18.61■□□□□ 0.57
MSRB3-205ENST00000535239 SLURP2P0DP57 97 aa18.6■□□□□ 0.57
MSRB3-205ENST00000535239 DYNLL1P63167 89 aaKnown RBP18.6■□□□□ 0.57
MSRB3-205ENST00000535239 TAF1CQ15572 869 aaPredicted RBP18.6■□□□□ 0.57
MSRB3-205ENST00000535239 HAUS7Q99871 368 aa18.6■□□□□ 0.57
MSRB3-205ENST00000535239 RIOK1Q9BRS2 568 aaKnown RBP18.6■□□□□ 0.57
MSRB3-205ENST00000535239 ZHX2Q9Y6X8 837 aa18.6■□□□□ 0.57
MSRB3-205ENST00000535239 DOCK1Q14185 1865 aa18.59■□□□□ 0.57
MSRB3-205ENST00000535239 TLR2O60603 784 aa18.59■□□□□ 0.57
MSRB3-205ENST00000535239 CAP2P40123 477 aa18.59■□□□□ 0.57
MSRB3-205ENST00000535239 SP3Q02447 781 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms