RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 ZNF394Q53GI3 561 aa6.06□□□□□ -1.44
SNHG1-201ENST00000535076 TEX35Q5T0J7 233 aa6.06□□□□□ -1.44
SNHG1-201ENST00000535076 LINC00114Q6XXX2 140 aa6.06□□□□□ -1.44
SNHG1-201ENST00000535076 ELOA2Q8IYF1 753 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-201ENST00000535076 VPS37AQ8NEZ2 397 aa6.06□□□□□ -1.44
SNHG1-201ENST00000535076 CHMP7Q8WUX9 453 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-201ENST00000535076 DNAAF4Q8WXU2 420 aa6.06□□□□□ -1.44
SNHG1-201ENST00000535076 RSPH1Q8WYR4 309 aa6.06□□□□□ -1.44
SNHG1-201ENST00000535076 SUSD3Q96L08 255 aa6.06□□□□□ -1.44
SNHG1-201ENST00000535076 UTP14AQ9BVJ6 771 aaKnown RBP6.06□□□□□ -1.44
SNHG1-201ENST00000535076 UNC45AQ9H3U1 944 aa6.06□□□□□ -1.44
SNHG1-201ENST00000535076 SUV39H2Q9H5I1 410 aa6.06□□□□□ -1.44
SNHG1-201ENST00000535076 ENAMQ9NRM1 1142 aa6.06□□□□□ -1.44
SNHG1-201ENST00000535076 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-201ENST00000535076 ZMIZ1Q9ULJ6 1067 aa6.06□□□□□ -1.44
SNHG1-201ENST00000535076 BCS1LQ9Y276 419 aa6.06□□□□□ -1.44
SNHG1-201ENST00000535076 GJA3Q9Y6H8 435 aa6.06□□□□□ -1.44
SNHG1-201ENST00000535076 RNF225M0QZC1 329 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-201ENST00000535076 NPHP1O15259 732 aa6.05□□□□□ -1.44
SNHG1-201ENST00000535076 ZSCAN9O15535 394 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-201ENST00000535076 RAB11FIP3O75154 756 aa6.05□□□□□ -1.44
SNHG1-201ENST00000535076 SNUPNO95149 360 aaKnown RBP6.05□□□□□ -1.44
SNHG1-201ENST00000535076 ECEL1O95672 775 aa6.05□□□□□ -1.44
SNHG1-201ENST00000535076 MAP4K4O95819 1239 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-201ENST00000535076 PECAM1P16284 738 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-201ENST00000535076 TYRO3Q06418 890 aa6.05□□□□□ -1.44
SNHG1-201ENST00000535076 ZNF468Q5VIY5 522 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-201ENST00000535076 HHATQ5VTY9 493 aa6.05□□□□□ -1.44
SNHG1-201ENST00000535076 CCDC80Q76M96 950 aa6.05□□□□□ -1.44
SNHG1-201ENST00000535076 RAB44Q7Z6P3 723 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-201ENST00000535076 PCGF5Q86SE9 256 aa6.05□□□□□ -1.44
SNHG1-201ENST00000535076 SRLQ86TD4 932 aa6.05□□□□□ -1.44
SNHG1-201ENST00000535076 ALDH16A1Q8IZ83 802 aa6.05□□□□□ -1.44
SNHG1-201ENST00000535076 MIPOL1Q8TD10 442 aa6.05□□□□□ -1.44
SNHG1-201ENST00000535076 ZNF483Q8TF39 744 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-201ENST00000535076 GIMAP1Q8WWP7 306 aa6.05□□□□□ -1.44
SNHG1-201ENST00000535076 KIF1BPQ96EK5 621 aa6.05□□□□□ -1.44
SNHG1-201ENST00000535076 NGLY1Q96IV0 654 aa6.05□□□□□ -1.44
SNHG1-201ENST00000535076 DCAF5Q96JK2 942 aa6.05□□□□□ -1.44
SNHG1-201ENST00000535076 BTBD6Q96KE9 485 aa6.05□□□□□ -1.44
SNHG1-201ENST00000535076 SCYL1Q96KG9 808 aa6.05□□□□□ -1.44
SNHG1-201ENST00000535076 MAK16Q9BXY0 300 aaKnown RBP6.05□□□□□ -1.44
SNHG1-201ENST00000535076 SEZ6LQ9BYH1 1024 aa6.05□□□□□ -1.44
SNHG1-201ENST00000535076 SLKQ9H2G2 1235 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-201ENST00000535076 HOMER3Q9NSC5 361 aa6.05□□□□□ -1.44
SNHG1-201ENST00000535076 SPTLC3Q9NUV7 552 aa6.05□□□□□ -1.44
SNHG1-201ENST00000535076 HOXC10Q9NYD6 342 aa6.05□□□□□ -1.44
SNHG1-201ENST00000535076 PSD3Q9NYI0 1048 aa6.05□□□□□ -1.44
SNHG1-201ENST00000535076 MARK1Q9P0L2 795 aa6.05□□□□□ -1.44
SNHG1-201ENST00000535076 NRBP1Q9UHY1 535 aa6.05□□□□□ -1.44
SNHG1-201ENST00000535076 ITGB1BP2Q9UKP3 347 aa6.05□□□□□ -1.44
SNHG1-201ENST00000535076 GPC6Q9Y625 555 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-201ENST00000535076 PTPRGP23470 1445 aa6.05□□□□□ -1.44
SNHG1-201ENST00000535076 VIRMAQ69YN4 1812 aaKnown RBP6.04□□□□□ -1.44
SNHG1-201ENST00000535076 E2F6O75461 281 aa6.04□□□□□ -1.44
SNHG1-201ENST00000535076 SASH1O94885 1247 aa6.04□□□□□ -1.44
SNHG1-201ENST00000535076 TRIM37O94972 964 aa6.04□□□□□ -1.44
SNHG1-201ENST00000535076 IVLP07476 585 aa6.04□□□□□ -1.44
SNHG1-201ENST00000535076 MSL3P1P0C860 447 aa6.04□□□□□ -1.44
SNHG1-201ENST00000535076 TNNT1P13805 278 aa6.04□□□□□ -1.44
SNHG1-201ENST00000535076 TCF3P15923 654 aa6.04□□□□□ -1.44
SNHG1-201ENST00000535076 YY1P25490 414 aa6.04□□□□□ -1.44
SNHG1-201ENST00000535076 U2AF2P26368 475 aaKnown RBP eCLIP6.04□□□□□ -1.449e-11■■■■■ 30
SNHG1-201ENST00000535076 WEE1P30291 646 aa6.04□□□□□ -1.44
SNHG1-201ENST00000535076 RBM6P78332 1123 aaKnown RBP6.04□□□□□ -1.44
SNHG1-201ENST00000535076 LAMC2Q13753 1193 aa6.04□□□□□ -1.44
SNHG1-201ENST00000535076 POSTNQ15063 836 aa6.04□□□□□ -1.44
SNHG1-201ENST00000535076 LARP1BQ659C4 914 aaKnown RBP6.04□□□□□ -1.44
SNHG1-201ENST00000535076 MICALL1Q8N3F8 863 aa6.04□□□□□ -1.44
SNHG1-201ENST00000535076 STK32AQ8WU08 396 aa6.04□□□□□ -1.44
SNHG1-201ENST00000535076 CCDC47Q96A33 483 aaKnown RBP6.04□□□□□ -1.44
SNHG1-201ENST00000535076 BICD1Q96G01 975 aa6.04□□□□□ -1.44
SNHG1-201ENST00000535076 CDK5RAP3Q96JB5 506 aa6.04□□□□□ -1.44
SNHG1-201ENST00000535076 HINFPQ9BQA5 517 aa6.04□□□□□ -1.44
SNHG1-201ENST00000535076 TRIM6Q9C030 488 aaPredicted RBP6.04□□□□□ -1.44
SNHG1-201ENST00000535076 FAM107BQ9H098 131 aa6.04□□□□□ -1.44
SNHG1-201ENST00000535076 PANK3Q9H999 370 aa6.04□□□□□ -1.44
SNHG1-201ENST00000535076 IFT122Q9HBG6 1241 aa6.04□□□□□ -1.44
SNHG1-201ENST00000535076 TOMM22Q9NS69 142 aa6.04□□□□□ -1.44
SNHG1-201ENST00000535076 ZMYM3Q14202 1370 aa6.04□□□□□ -1.44
SNHG1-201ENST00000535076 DHX57Q6P158 1386 aaKnown RBP6.04□□□□□ -1.44
SNHG1-201ENST00000535076 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.03□□□□□ -1.44
SNHG1-201ENST00000535076 CCDC194A0A1B0GVG4 234 aa6.03□□□□□ -1.44
SNHG1-201ENST00000535076 PDLIM1O00151 329 aa6.03□□□□□ -1.44
SNHG1-201ENST00000535076 KRT38O76015 456 aa6.03□□□□□ -1.44
SNHG1-201ENST00000535076 GCFC2P16383 781 aaKnown RBP6.03□□□□□ -1.44
SNHG1-201ENST00000535076 IGFBP4P22692 258 aa6.03□□□□□ -1.44
SNHG1-201ENST00000535076 ADH6P28332 368 aa6.03□□□□□ -1.44
SNHG1-201ENST00000535076 HOXD10P28358 340 aa6.03□□□□□ -1.44
SNHG1-201ENST00000535076 HOXA10P31260 410 aaPredicted RBP6.03□□□□□ -1.44
SNHG1-201ENST00000535076 ATICP31939 592 aa6.03□□□□□ -1.44
SNHG1-201ENST00000535076 NF2P35240 595 aa6.03□□□□□ -1.44
SNHG1-201ENST00000535076 GJA8P48165 433 aa6.03□□□□□ -1.44
SNHG1-201ENST00000535076 DGKGP49619 791 aa6.03□□□□□ -1.44
SNHG1-201ENST00000535076 ZNF132P52740 706 aa6.03□□□□□ -1.44
SNHG1-201ENST00000535076 XPCQ01831 940 aaPredicted RBP6.03□□□□□ -1.44
SNHG1-201ENST00000535076 TBC1D8BQ0IIM8 1120 aa6.03□□□□□ -1.44
SNHG1-201ENST00000535076 FAM69CQ0P6D2 419 aa6.03□□□□□ -1.44
SNHG1-201ENST00000535076 FKBP5Q13451 457 aaPredicted RBP6.03□□□□□ -1.44
SNHG1-201ENST00000535076 PKN1Q16512 942 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 1803.9 ms