RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 TTF1Q15361 905 aaPredicted RBP12.73□□□□□ -0.37
CSDE1-217ENST00000534699 SCYL3Q8IZE3 742 aa12.73□□□□□ -0.37
CSDE1-217ENST00000534699 CLUAP1Q96AJ1 413 aa12.73□□□□□ -0.37
CSDE1-217ENST00000534699 TSKSQ9UJT2 592 aa12.73□□□□□ -0.37
CSDE1-217ENST00000534699 PHIPQ8WWQ0 1821 aa12.73□□□□□ -0.37
CSDE1-217ENST00000534699 CDK5RAP2Q96SN8 1893 aa12.73□□□□□ -0.37
CSDE1-217ENST00000534699 CCL15-CCL14A0A0B4J2E2 113 aa12.73□□□□□ -0.37
CSDE1-217ENST00000534699 TBC1D8O95759 1140 aa12.73□□□□□ -0.37
CSDE1-217ENST00000534699 BTDP43251 543 aa12.73□□□□□ -0.37
CSDE1-217ENST00000534699 CCL15Q16663 113 aa12.73□□□□□ -0.37
CSDE1-217ENST00000534699 IGF2BP3O00425 579 aaKnown RBP eCLIP12.72□□□□□ -0.373e-6■■■□□ 19.1
CSDE1-217ENST00000534699 RGS3P49796 1198 aa12.72□□□□□ -0.37
CSDE1-217ENST00000534699 SP3Q02447 781 aa12.72□□□□□ -0.37
CSDE1-217ENST00000534699 KIF22Q14807 665 aa12.72□□□□□ -0.37
CSDE1-217ENST00000534699 METTL16Q86W50 562 aaKnown RBP12.72□□□□□ -0.37
CSDE1-217ENST00000534699 ATAD5Q96QE3 1844 aa12.72□□□□□ -0.37
CSDE1-217ENST00000534699 RHBDL3P58872 404 aa12.72□□□□□ -0.37
CSDE1-217ENST00000534699 BRI3BPQ8WY22 251 aa12.72□□□□□ -0.37
CSDE1-217ENST00000534699 KIF1BPQ96EK5 621 aa12.72□□□□□ -0.37
CSDE1-217ENST00000534699 ABCF2Q9UG63 623 aa12.72□□□□□ -0.37
CSDE1-217ENST00000534699 SCAF8Q9UPN6 1271 aaKnown RBP12.72□□□□□ -0.37
CSDE1-217ENST00000534699 LOC285556D6RIA3 1793 aa12.72□□□□□ -0.37
CSDE1-217ENST00000534699 DIXDC1Q155Q3 683 aa12.71□□□□□ -0.37
CSDE1-217ENST00000534699 FOXP4Q8IVH2 680 aaPredicted RBP12.71□□□□□ -0.37
CSDE1-217ENST00000534699 LRP2BPQ9P2M1 347 aa12.71□□□□□ -0.37
CSDE1-217ENST00000534699 RCAN3Q9UKA8 241 aa12.71□□□□□ -0.37
CSDE1-217ENST00000534699 MCAMP43121 646 aa12.71□□□□□ -0.38
CSDE1-217ENST00000534699 MLLT1Q03111 559 aaPredicted RBP12.71□□□□□ -0.38
CSDE1-217ENST00000534699 PICK1Q9NRD5 415 aa12.71□□□□□ -0.38
CSDE1-217ENST00000534699 ZBTB40Q9NUA8 1239 aa12.71□□□□□ -0.38
CSDE1-217ENST00000534699 HPS5Q9UPZ3 1129 aa12.71□□□□□ -0.38
CSDE1-217ENST00000534699 PTPRFP10586 1907 aa12.71□□□□□ -0.38
CSDE1-217ENST00000534699 CCDC85CA6NKD9 419 aa12.7□□□□□ -0.38
CSDE1-217ENST00000534699 PHF20L1A8MW92 1017 aa12.7□□□□□ -0.38
CSDE1-217ENST00000534699 TLR2O60603 784 aa12.7□□□□□ -0.38
CSDE1-217ENST00000534699 HOXD10P28358 340 aa12.7□□□□□ -0.38
CSDE1-217ENST00000534699 TAF1CQ15572 869 aaPredicted RBP12.7□□□□□ -0.38
CSDE1-217ENST00000534699 NAA16Q6N069 864 aaPredicted RBP12.7□□□□□ -0.38
CSDE1-217ENST00000534699 RLBP1P12271 317 aa12.7□□□□□ -0.38
CSDE1-217ENST00000534699 CRHR2Q13324 411 aa12.7□□□□□ -0.38
CSDE1-217ENST00000534699 ARMC5Q96C12 935 aa12.7□□□□□ -0.38
CSDE1-217ENST00000534699 PTPN18Q99952 460 aa12.7□□□□□ -0.38
CSDE1-217ENST00000534699 RAI14Q9P0K7 980 aa12.7□□□□□ -0.38
CSDE1-217ENST00000534699 TNNQ9UQP3 1299 aa12.7□□□□□ -0.38
CSDE1-217ENST00000534699 PABPC4Q13310 644 aaKnown RBP eCLIP12.69□□□□□ -0.386e-14■□□□□ 10.8
CSDE1-217ENST00000534699 AAMPQ13685 434 aa12.69□□□□□ -0.38
CSDE1-217ENST00000534699 OTUD5Q96G74 571 aa12.69□□□□□ -0.38
CSDE1-217ENST00000534699 PARK7Q99497 189 aaKnown RBP12.69□□□□□ -0.38
CSDE1-217ENST00000534699 AS3MTQ9HBK9 375 aa12.69□□□□□ -0.38
CSDE1-217ENST00000534699 PI4KBQ9UBF8 816 aa12.69□□□□□ -0.38
CSDE1-217ENST00000534699 ADGRA2Q96PE1 1338 aa12.69□□□□□ -0.38
CSDE1-217ENST00000534699 CLASRPQ8N2M8 674 aaKnown RBP12.69□□□□□ -0.38
CSDE1-217ENST00000534699 PROCA1Q8NCQ7 364 aaPredicted RBP12.69□□□□□ -0.38
CSDE1-217ENST00000534699 PTPN22Q9Y2R2 807 aa12.69□□□□□ -0.38
CSDE1-217ENST00000534699 A0A0G2JLL6 359 aaPredicted RBP12.68□□□□□ -0.38
CSDE1-217ENST00000534699 CAPN15O75808 1086 aa12.68□□□□□ -0.38
CSDE1-217ENST00000534699 MAP3K12Q12852 859 aa12.68□□□□□ -0.38
CSDE1-217ENST00000534699 NFIAQ12857 509 aa12.68□□□□□ -0.38
CSDE1-217ENST00000534699 OTOP1Q7RTM1 612 aa12.68□□□□□ -0.38
CSDE1-217ENST00000534699 PRRT2Q7Z6L0 340 aaPredicted RBP12.68□□□□□ -0.38
CSDE1-217ENST00000534699 GTF3C2Q8WUA4 911 aaPredicted RBP12.68□□□□□ -0.38
CSDE1-217ENST00000534699 DBNDD2Q9BQY9 259 aa12.68□□□□□ -0.38
CSDE1-217ENST00000534699 EFCC1Q9HA90 598 aa12.68□□□□□ -0.38
CSDE1-217ENST00000534699 MGAMO43451 1857 aa12.68□□□□□ -0.38
CSDE1-217ENST00000534699 CACNB3P54284 484 aa12.68□□□□□ -0.38
CSDE1-217ENST00000534699 PNMA3Q9UL41 463 aa12.68□□□□□ -0.38
CSDE1-217ENST00000534699 MYH1P12882 1939 aa12.68□□□□□ -0.38
CSDE1-217ENST00000534699 SH3D19Q5HYK7 790 aa12.67□□□□□ -0.38
CSDE1-217ENST00000534699 TEX11Q8IYF3 940 aa12.67□□□□□ -0.38
CSDE1-217ENST00000534699 RHPN1Q8TCX5 695 aa12.67□□□□□ -0.38
CSDE1-217ENST00000534699 WDR18Q9BV38 432 aa12.67□□□□□ -0.38
CSDE1-217ENST00000534699 EHD4Q9H223 541 aa12.67□□□□□ -0.38
CSDE1-217ENST00000534699 AFG3L2Q9Y4W6 797 aa12.67□□□□□ -0.38
CSDE1-217ENST00000534699 BTBD19C9JJ37 291 aa12.67□□□□□ -0.38
CSDE1-217ENST00000534699 IRF6O14896 467 aa12.67□□□□□ -0.38
CSDE1-217ENST00000534699 PTPRAP18433 802 aa12.67□□□□□ -0.38
CSDE1-217ENST00000534699 MKRN3Q13064 507 aaKnown RBP12.67□□□□□ -0.38
CSDE1-217ENST00000534699 C17orf99Q6UX52 265 aa12.67□□□□□ -0.38
CSDE1-217ENST00000534699 DBNLQ9UJU6 430 aaKnown RBP12.67□□□□□ -0.38
CSDE1-217ENST00000534699 MYH7P12883 1935 aa12.67□□□□□ -0.38
CSDE1-217ENST00000534699 HLA-DOAP06340 250 aa12.66□□□□□ -0.38
CSDE1-217ENST00000534699 TCP10Q12799 353 aa12.66□□□□□ -0.38
CSDE1-217ENST00000534699 NBPF11Q86T75 865 aa12.66□□□□□ -0.38
CSDE1-217ENST00000534699 TICAM2Q86XR7 235 aa12.66□□□□□ -0.38
CSDE1-217ENST00000534699 ZSCAN29Q8IWY8 852 aaPredicted RBP12.66□□□□□ -0.38
CSDE1-217ENST00000534699 EAF2Q96CJ1 260 aaPredicted RBP12.66□□□□□ -0.38
CSDE1-217ENST00000534699 SIPA1L1O43166 1804 aa12.66□□□□□ -0.38
CSDE1-217ENST00000534699 CYP2E1P05181 493 aaPredicted RBP12.66□□□□□ -0.38
CSDE1-217ENST00000534699 INPP5BP32019 993 aa12.66□□□□□ -0.38
CSDE1-217ENST00000534699 SH3BP5LQ7L8J4 393 aa12.66□□□□□ -0.38
CSDE1-217ENST00000534699 CDAN1Q8IWY9 1227 aa12.66□□□□□ -0.38
CSDE1-217ENST00000534699 ZNF384Q8TF68 577 aa12.66□□□□□ -0.38
CSDE1-217ENST00000534699 ZKSCAN4Q969J2 545 aaPredicted RBP12.66□□□□□ -0.38
CSDE1-217ENST00000534699 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.66□□□□□ -0.38
CSDE1-217ENST00000534699 DDX60LQ5H9U9 1706 aaKnown RBP12.66□□□□□ -0.38
CSDE1-217ENST00000534699 C19orf81C9J6K1 198 aa12.65□□□□□ -0.38
CSDE1-217ENST00000534699 MOGSQ13724 837 aa12.65□□□□□ -0.38
CSDE1-217ENST00000534699 FAM43AQ8N2R8 423 aa12.65□□□□□ -0.38
CSDE1-217ENST00000534699 TRIM17Q9Y577 477 aa12.65□□□□□ -0.38
CSDE1-217ENST00000534699 MYO5AQ9Y4I1 1855 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms