RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 RASSF10A6NK89 507 aa6.85□□□□□ -1.31
ECHDC1-223ENST00000534442 ST8SIA5O15466 376 aa6.85□□□□□ -1.31
ECHDC1-223ENST00000534442 POLR3DP05423 398 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-223ENST00000534442 KCNQ4P56696 695 aa6.85□□□□□ -1.31
ECHDC1-223ENST00000534442 RAD51AP2Q09MP3 1159 aa6.85□□□□□ -1.31
ECHDC1-223ENST00000534442 SFSWAPQ12872 951 aaKnown RBP6.85□□□□□ -1.31
ECHDC1-223ENST00000534442 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.85□□□□□ -1.31
ECHDC1-223ENST00000534442 C1orf127Q8N9H9 656 aa6.85□□□□□ -1.31
ECHDC1-223ENST00000534442 C11orf16Q9NQ32 467 aa6.85□□□□□ -1.31
ECHDC1-223ENST00000534442 AAASQ9NRG9 546 aa6.85□□□□□ -1.31
ECHDC1-223ENST00000534442 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-223ENST00000534442 LRRC37A3O60309 1634 aa6.85□□□□□ -1.31
ECHDC1-223ENST00000534442 CDC42BPGQ6DT37 1551 aa6.85□□□□□ -1.31
ECHDC1-223ENST00000534442 SSH2Q76I76 1423 aa6.84□□□□□ -1.31
ECHDC1-223ENST00000534442 KIF1AQ12756 1690 aa6.84□□□□□ -1.31
ECHDC1-223ENST00000534442 SLC35F4A4IF30 521 aa6.84□□□□□ -1.31
ECHDC1-223ENST00000534442 EREGO14944 169 aa6.84□□□□□ -1.31
ECHDC1-223ENST00000534442 EFSO43281 561 aa6.84□□□□□ -1.31
ECHDC1-223ENST00000534442 MAN1A2O60476 641 aa6.84□□□□□ -1.31
ECHDC1-223ENST00000534442 FAM157BP0CG42 384 aa6.84□□□□□ -1.31
ECHDC1-223ENST00000534442 ERCC5P28715 1186 aaPredicted RBP6.84□□□□□ -1.31
ECHDC1-223ENST00000534442 ITGAEP38570 1179 aa6.84□□□□□ -1.31
ECHDC1-223ENST00000534442 LBRQ14739 615 aaKnown RBP6.84□□□□□ -1.31
ECHDC1-223ENST00000534442 EFHC2Q5JST6 749 aa6.84□□□□□ -1.31
ECHDC1-223ENST00000534442 NLRP13Q86W25 1043 aa6.84□□□□□ -1.31
ECHDC1-223ENST00000534442 GALNT12Q8IXK2 581 aa6.84□□□□□ -1.31
ECHDC1-223ENST00000534442 KCNH4Q9UQ05 1017 aa6.84□□□□□ -1.31
ECHDC1-223ENST00000534442 SPG7Q9UQ90 795 aa6.84□□□□□ -1.31
ECHDC1-223ENST00000534442 SPATA31E1Q6ZUB1 1445 aa6.84□□□□□ -1.32
ECHDC1-223ENST00000534442 LAMA2P24043 3122 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-223ENST00000534442 CCNB3Q8WWL7 1395 aa6.83□□□□□ -1.32
ECHDC1-223ENST00000534442 ROBO2Q9HCK4 1378 aa6.83□□□□□ -1.32
ECHDC1-223ENST00000534442 SYNGAP1Q96PV0 1343 aa6.83□□□□□ -1.32
ECHDC1-223ENST00000534442 PASKQ96RG2 1323 aa6.83□□□□□ -1.32
ECHDC1-223ENST00000534442 LOC105371045A0A1W2PR82 267 aa6.83□□□□□ -1.32
ECHDC1-223ENST00000534442 ATXN7O15265 892 aaPredicted RBP6.83□□□□□ -1.32
ECHDC1-223ENST00000534442 SASH3O75995 380 aa6.83□□□□□ -1.32
ECHDC1-223ENST00000534442 EIF4BP23588 611 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-223ENST00000534442 PTSQ03393 145 aa6.83□□□□□ -1.32
ECHDC1-223ENST00000534442 GRIN2CQ14957 1233 aa6.83□□□□□ -1.32
ECHDC1-223ENST00000534442 CHRNA2Q15822 529 aa6.83□□□□□ -1.32
ECHDC1-223ENST00000534442 NT5DC4Q86YG4 428 aa6.83□□□□□ -1.32
ECHDC1-223ENST00000534442 CRELD1Q96HD1 420 aa6.83□□□□□ -1.32
ECHDC1-223ENST00000534442 GSX2Q9BZM3 304 aa6.83□□□□□ -1.32
ECHDC1-223ENST00000534442 C12orf49Q9H741 205 aa6.83□□□□□ -1.32
ECHDC1-223ENST00000534442 NPHS2Q9NP85 383 aa6.83□□□□□ -1.32
ECHDC1-223ENST00000534442 METTL5Q9NRN9 209 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-223ENST00000534442 CUEDC1Q9NWM3 386 aaPredicted RBP6.83□□□□□ -1.32
ECHDC1-223ENST00000534442 ABI2Q9NYB9 513 aaPredicted RBP6.83□□□□□ -1.32
ECHDC1-223ENST00000534442 PCDHGC4Q9Y5F7 938 aa6.83□□□□□ -1.32
ECHDC1-223ENST00000534442 CCDC18Q5T9S5 1454 aa6.83□□□□□ -1.32
ECHDC1-223ENST00000534442 SBNO1A3KN83 1393 aa6.82□□□□□ -1.32
ECHDC1-223ENST00000534442 TTC28Q96AY4 2481 aa6.82□□□□□ -1.32
ECHDC1-223ENST00000534442 CYP2E1P05181 493 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-223ENST00000534442 TARSP26639 723 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-223ENST00000534442 ZC3H6P61129 1189 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-223ENST00000534442 TNP2Q05952 138 aa6.82□□□□□ -1.32
ECHDC1-223ENST00000534442 RIPOR1Q6ZS17 1223 aa6.82□□□□□ -1.32
ECHDC1-223ENST00000534442 RNF34Q969K3 372 aa6.82□□□□□ -1.32
ECHDC1-223ENST00000534442 NDFIP2Q9NV92 336 aa6.82□□□□□ -1.32
ECHDC1-223ENST00000534442 BCL9O00512 1426 aa6.82□□□□□ -1.32
ECHDC1-223ENST00000534442 CEP290O15078 2479 aa6.81□□□□□ -1.32
ECHDC1-223ENST00000534442 TMEM265A0A087WTH1 108 aa6.81□□□□□ -1.32
ECHDC1-223ENST00000534442 GIPC1O14908 333 aa6.81□□□□□ -1.32
ECHDC1-223ENST00000534442 ZNF76P36508 570 aa6.81□□□□□ -1.32
ECHDC1-223ENST00000534442 EVA1CP58658 441 aa6.81□□□□□ -1.32
ECHDC1-223ENST00000534442 GRM1Q13255 1194 aa6.81□□□□□ -1.32
ECHDC1-223ENST00000534442 DDB1Q16531 1140 aa6.81□□□□□ -1.32
ECHDC1-223ENST00000534442 DBN1Q16643 649 aa6.81□□□□□ -1.32
ECHDC1-223ENST00000534442 TTC39BQ5VTQ0 682 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-223ENST00000534442 FIGNL1Q6PIW4 674 aa6.81□□□□□ -1.32
ECHDC1-223ENST00000534442 MARCH10Q8NA82 808 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-223ENST00000534442 NUCKS1Q9H1E3 243 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-223ENST00000534442 NLRP2Q9NX02 1062 aa6.81□□□□□ -1.32
ECHDC1-223ENST00000534442 ZFATQ9P243 1243 aa6.81□□□□□ -1.32
ECHDC1-223ENST00000534442 LAMA3Q16787 3333 aa6.81□□□□□ -1.32
ECHDC1-223ENST00000534442 PIK3C2AO00443 1686 aa6.81□□□□□ -1.32
ECHDC1-223ENST00000534442 PRR36Q9H6K5 1346 aa6.8□□□□□ -1.32
ECHDC1-223ENST00000534442 DCDC2BA2VCK2 349 aa6.8□□□□□ -1.32
ECHDC1-223ENST00000534442 KHNYNO15037 678 aaKnown RBP6.8□□□□□ -1.32
ECHDC1-223ENST00000534442 CA12O43570 354 aa6.8□□□□□ -1.32
ECHDC1-223ENST00000534442 BNIP3LO60238 219 aa6.8□□□□□ -1.32
ECHDC1-223ENST00000534442 MMP20O60882 483 aa6.8□□□□□ -1.32
ECHDC1-223ENST00000534442 MAPTP10636 758 aaKnown RBP6.8□□□□□ -1.32
ECHDC1-223ENST00000534442 CCINQ13939 588 aa6.8□□□□□ -1.32
ECHDC1-223ENST00000534442 NAALADL2Q58DX5 795 aa6.8□□□□□ -1.32
ECHDC1-223ENST00000534442 NXPE4Q6UWF7 544 aa6.8□□□□□ -1.32
ECHDC1-223ENST00000534442 KRT25Q7Z3Z0 450 aa6.8□□□□□ -1.32
ECHDC1-223ENST00000534442 PMEPA1Q969W9 287 aa6.8□□□□□ -1.32
ECHDC1-223ENST00000534442 HIRIP3Q9BW71 556 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-223ENST00000534442 BCO2Q9BYV7 579 aa6.8□□□□□ -1.32
ECHDC1-223ENST00000534442 LATS2Q9NRM7 1088 aa6.8□□□□□ -1.32
ECHDC1-223ENST00000534442 THRAP3Q9Y2W1 955 aaKnown RBP6.8□□□□□ -1.32
ECHDC1-223ENST00000534442 KIAA0232Q92628 1395 aa6.8□□□□□ -1.32
ECHDC1-223ENST00000534442 GLTPD2A6NH11 291 aa6.79□□□□□ -1.32
ECHDC1-223ENST00000534442 POTECB2RU33 542 aa6.79□□□□□ -1.32
ECHDC1-223ENST00000534442 CES1P23141 567 aa6.79□□□□□ -1.32
ECHDC1-223ENST00000534442 MAP3K12Q12852 859 aa6.79□□□□□ -1.32
ECHDC1-223ENST00000534442 LAMC2Q13753 1193 aa6.79□□□□□ -1.32
ECHDC1-223ENST00000534442 GRM2Q14416 872 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms